Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 RNU2-1-201ENST00000618664 191 ntBASIC1.76□□□□□ -2.13
FOXC2Q99958 U2.6-201ENST00000619225 191 ntBASIC1.76□□□□□ -2.13
FOXC2Q99958 U2.5-201ENST00000619465 191 ntBASIC1.76□□□□□ -2.13
FOXC2Q99958 U2.10-201ENST00000620268 191 ntBASIC1.76□□□□□ -2.13
FOXC2Q99958 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.76□□□□□ -2.13
FOXC2Q99958 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
FOXC2Q99958 ZNF720P1-201ENST00000562403 1939 ntBASIC1.76□□□□□ -2.13
FOXC2Q99958 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
FOXC2Q99958 Y_RNA.33-201ENST00000362591 102 ntBASIC1.75□□□□□ -2.13
FOXC2Q99958 Y_RNA.116-201ENST00000363292 103 ntBASIC1.75□□□□□ -2.13
FOXC2Q99958 RNU6-946P-201ENST00000383878 107 ntBASIC1.75□□□□□ -2.13
FOXC2Q99958 RNY3P9-201ENST00000384727 106 ntBASIC1.75□□□□□ -2.13
FOXC2Q99958 MIR558-201ENST00000384920 94 ntBASIC1.75□□□□□ -2.13
FOXC2Q99958 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
FOXC2Q99958 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
FOXC2Q99958 RPS3AP36-201ENST00000398190 775 ntBASIC1.75□□□□□ -2.13
FOXC2Q99958 FTH1P15-201ENST00000406984 280 ntBASIC1.75□□□□□ -2.13
FOXC2Q99958 MTND3P17-201ENST00000416968 344 ntBASIC1.75□□□□□ -2.13
FOXC2Q99958 AC137499.1-201ENST00000427602 88 ntBASIC1.75□□□□□ -2.13
FOXC2Q99958 WARS2P1-201ENST00000429678 537 ntBASIC1.75□□□□□ -2.13
FOXC2Q99958 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.75□□□□□ -2.13
FOXC2Q99958 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.75□□□□□ -2.13
FOXC2Q99958 AC104850.1-201ENST00000435940 476 ntBASIC1.75□□□□□ -2.13
FOXC2Q99958 AC092473.1-201ENST00000441098 221 ntBASIC1.75□□□□□ -2.13
FOXC2Q99958 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.75□□□□□ -2.13
FOXC2Q99958 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.75□□□□□ -2.13
FOXC2Q99958 AL031659.1-201ENST00000447075 539 ntBASIC1.75□□□□□ -2.13
FOXC2Q99958 AL033528.1-201ENST00000453780 140 ntBASIC1.75□□□□□ -2.13
FOXC2Q99958 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.75□□□□□ -2.13
FOXC2Q99958 SNORA48.11-201ENST00000517015 89 ntBASIC1.75□□□□□ -2.13
FOXC2Q99958 RNU6-1220P-201ENST00000517126 108 ntBASIC1.75□□□□□ -2.13
FOXC2Q99958 AC090572.1-201ENST00000519251 160 ntBASIC1.75□□□□□ -2.13
FOXC2Q99958 MTND2P38-201ENST00000522536 667 ntBASIC1.75□□□□□ -2.13
FOXC2Q99958 OR5B19P-201ENST00000531766 928 ntBASIC1.75□□□□□ -2.13
FOXC2Q99958 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.75□□□□□ -2.13
FOXC2Q99958 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.75□□□□□ -2.13
FOXC2Q99958 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.75□□□□□ -2.13
FOXC2Q99958 VN1R80P-201ENST00000597126 338 ntBASIC1.75□□□□□ -2.13
FOXC2Q99958 AC090578.1-201ENST00000604955 591 ntBASIC1.75□□□□□ -2.13
FOXC2Q99958 AL359821.1-201ENST00000605519 182 ntBASIC1.75□□□□□ -2.13
FOXC2Q99958 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.75□□□□□ -2.13
FOXC2Q99958 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.75□□□□□ -2.13
FOXC2Q99958 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
FOXC2Q99958 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
FOXC2Q99958 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
FOXC2Q99958 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.74□□□□□ -2.13
FOXC2Q99958 RNU5F-7P-201ENST00000363696 115 ntBASIC1.74□□□□□ -2.13
FOXC2Q99958 RNU6-395P-201ENST00000365662 106 ntBASIC1.74□□□□□ -2.13
FOXC2Q99958 SNORA40.3-201ENST00000390964 122 ntBASIC1.74□□□□□ -2.13
FOXC2Q99958 SNORA46.1-201ENST00000391069 153 ntBASIC1.74□□□□□ -2.13
FOXC2Q99958 SNORA17.3-201ENST00000391159 129 ntBASIC1.74□□□□□ -2.13
FOXC2Q99958 SNORA40.18-201ENST00000391200 128 ntBASIC1.74□□□□□ -2.13
FOXC2Q99958 MRPL42P2-201ENST00000403169 426 ntBASIC1.74□□□□□ -2.13
FOXC2Q99958 AL031779.1-201ENST00000415663 330 ntBASIC1.74□□□□□ -2.13
FOXC2Q99958 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.74□□□□□ -2.13
FOXC2Q99958 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.74□□□□□ -2.13
FOXC2Q99958 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.74□□□□□ -2.13
FOXC2Q99958 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.74□□□□□ -2.13
FOXC2Q99958 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
FOXC2Q99958 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
FOXC2Q99958 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.74□□□□□ -2.13
FOXC2Q99958 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.74□□□□□ -2.13
FOXC2Q99958 TRMT112P2-201ENST00000512910 132 ntBASIC1.74□□□□□ -2.13
FOXC2Q99958 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.74□□□□□ -2.13
FOXC2Q99958 OR5AQ1P-201ENST00000527596 927 ntBASIC1.74□□□□□ -2.13
FOXC2Q99958 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.74□□□□□ -2.13
FOXC2Q99958 AC233702.2-202ENST00000562547 291 ntBASIC1.74□□□□□ -2.13
FOXC2Q99958 AC007336.1-201ENST00000576365 3828 ntBASIC1.74□□□□□ -2.13
FOXC2Q99958 CLIC4P2-201ENST00000601934 717 ntBASIC1.74□□□□□ -2.13
FOXC2Q99958 AL590229.1-201ENST00000603497 542 ntBASIC1.74□□□□□ -2.13
FOXC2Q99958 AL670379.2-201ENST00000604983 252 ntBASIC1.74□□□□□ -2.13
FOXC2Q99958 AL670379.4-201ENST00000605279 254 ntBASIC1.74□□□□□ -2.13
FOXC2Q99958 AC087752.4-201ENST00000605911 462 ntBASIC1.74□□□□□ -2.13
FOXC2Q99958 MIR15A-201ENST00000607334 83 ntBASIC1.74□□□□□ -2.13
FOXC2Q99958 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.74□□□□□ -2.13
FOXC2Q99958 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.74□□□□□ -2.13
FOXC2Q99958 AC008121.3-201ENST00000618726 433 ntBASIC1.74□□□□□ -2.13
FOXC2Q99958 AC009509.4-201ENST00000619202 509 ntBASIC1.74□□□□□ -2.13
FOXC2Q99958 Z69908.1-201ENST00000622603 247 ntBASIC1.74□□□□□ -2.13
FOXC2Q99958 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
FOXC2Q99958 FARSBP1-201ENST00000435808 1778 ntBASIC1.74□□□□□ -2.13
FOXC2Q99958 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
FOXC2Q99958 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.73□□□□□ -2.13
FOXC2Q99958 AC073343.1-201ENST00000328239 651 ntBASIC1.73□□□□□ -2.13
FOXC2Q99958 SNORD114-19-201ENST00000363072 75 ntBASIC1.73□□□□□ -2.13
FOXC2Q99958 Y_RNA.122-201ENST00000363331 96 ntBASIC1.73□□□□□ -2.13
FOXC2Q99958 SNORA25B-201ENST00000365507 128 ntBASIC1.73□□□□□ -2.13
FOXC2Q99958 SNORA75-201ENST00000384158 137 ntBASIC1.73□□□□□ -2.13
FOXC2Q99958 HMGN2P39-201ENST00000398005 273 ntBASIC1.73□□□□□ -2.13
FOXC2Q99958 AC114491.1-201ENST00000416095 246 ntBASIC1.73□□□□□ -2.13
FOXC2Q99958 BTF3P4-201ENST00000418852 495 ntBASIC1.73□□□□□ -2.13
FOXC2Q99958 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.73□□□□□ -2.13
FOXC2Q99958 MED13P1-201ENST00000428342 171 ntBASIC1.73□□□□□ -2.13
FOXC2Q99958 Z82205.1-201ENST00000428456 297 ntBASIC1.73□□□□□ -2.13
FOXC2Q99958 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.73□□□□□ -2.13
FOXC2Q99958 USP9YP29-201ENST00000445112 563 ntBASIC1.73□□□□□ -2.13
FOXC2Q99958 MTCYBP1-201ENST00000454315 1119 ntBASIC1.73□□□□□ -2.13
FOXC2Q99958 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.73□□□□□ -2.13
FOXC2Q99958 snoU109.1-201ENST00000459339 135 ntBASIC1.73□□□□□ -2.13
FOXC2Q99958 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 141.1 ms