Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 APOOP1-201ENST00000604695 592 ntBASIC3.33□□□□□ -1.88
SNX27Q96L92 AC087045.1-201ENST00000605856 382 ntBASIC3.33□□□□□ -1.88
SNX27Q96L92 RNU6-85P-201ENST00000605989 107 ntBASIC3.33□□□□□ -1.88
SNX27Q96L92 AC004852.3-201ENST00000614131 326 ntBASIC3.33□□□□□ -1.88
SNX27Q96L92 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.33□□□□□ -1.88
SNX27Q96L92 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.33□□□□□ -1.88
SNX27Q96L92 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
SNX27Q96L92 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
SNX27Q96L92 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.32□□□□□ -1.88
SNX27Q96L92 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
SNX27Q96L92 AC138393.1-203ENST00000327086 343 ntBASIC3.32□□□□□ -1.88
SNX27Q96L92 RNU6-1013P-201ENST00000384180 107 ntBASIC3.32□□□□□ -1.88
SNX27Q96L92 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.32□□□□□ -1.88
SNX27Q96L92 AC245291.1-201ENST00000419501 328 ntBASIC3.32□□□□□ -1.88
SNX27Q96L92 MTND4LP16-201ENST00000440828 295 ntBASIC3.32□□□□□ -1.88
SNX27Q96L92 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.32□□□□□ -1.88
SNX27Q96L92 RPS12P18-201ENST00000442381 270 ntBASIC3.32□□□□□ -1.88
SNX27Q96L92 AC011753.1-201ENST00000451001 220 ntBASIC3.32□□□□□ -1.88
SNX27Q96L92 PPP1R2P5-201ENST00000457256 603 ntBASIC3.32□□□□□ -1.88
SNX27Q96L92 RNU7-138P-201ENST00000459479 64 ntBASIC3.32□□□□□ -1.88
SNX27Q96L92 RPL7P43-201ENST00000478876 753 ntBASIC3.32□□□□□ -1.88
SNX27Q96L92 RPS29P21-201ENST00000496272 170 ntBASIC3.32□□□□□ -1.88
SNX27Q96L92 TRBVA-201ENST00000498804 316 ntBASIC3.32□□□□□ -1.88
SNX27Q96L92 AC008549.1-201ENST00000512900 643 ntBASIC3.32□□□□□ -1.88
SNX27Q96L92 RNU6-875P-201ENST00000516488 106 ntBASIC3.32□□□□□ -1.88
SNX27Q96L92 RNU7-30P-201ENST00000516835 62 ntBASIC3.32□□□□□ -1.88
SNX27Q96L92 SNORA31.21-201ENST00000517180 77 ntBASIC3.32□□□□□ -1.88
SNX27Q96L92 AC087854.1-201ENST00000519706 414 ntBASIC3.32□□□□□ -1.88
SNX27Q96L92 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.32□□□□□ -1.88
SNX27Q96L92 SCOCP1-201ENST00000554676 349 ntBASIC3.32□□□□□ -1.88
SNX27Q96L92 MIR3942-201ENST00000585264 109 ntBASIC3.32□□□□□ -1.88
SNX27Q96L92 AL133393.1-201ENST00000603277 287 ntBASIC3.32□□□□□ -1.88
SNX27Q96L92 AC021646.1-201ENST00000605469 484 ntBASIC3.32□□□□□ -1.88
SNX27Q96L92 AL591516.1-201ENST00000611326 274 ntBASIC3.32□□□□□ -1.88
SNX27Q96L92 AC063943.3-201ENST00000615562 356 ntBASIC3.32□□□□□ -1.88
SNX27Q96L92 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC3.32□□□□□ -1.88
SNX27Q96L92 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SNX27Q96L92 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SNX27Q96L92 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.31□□□□□ -1.88
SNX27Q96L92 MIR22-201ENST00000362190 85 ntBASIC3.31□□□□□ -1.88
SNX27Q96L92 RNU6-37P-201ENST00000362692 107 ntBASIC3.31□□□□□ -1.88
SNX27Q96L92 RNA5SP383-201ENST00000362934 120 ntBASIC3.31□□□□□ -1.88
SNX27Q96L92 RNU6-11P-201ENST00000364234 107 ntBASIC3.31□□□□□ -1.88
SNX27Q96L92 SNORA71.1-201ENST00000364523 117 ntBASIC3.31□□□□□ -1.88
SNX27Q96L92 RNU6-25P-201ENST00000383873 107 ntBASIC3.31□□□□□ -1.88
SNX27Q96L92 RNU6-1-201ENST00000383898 107 ntBASIC3.31□□□□□ -1.88
SNX27Q96L92 RNU6-48P-201ENST00000384161 107 ntBASIC3.31□□□□□ -1.88
SNX27Q96L92 RNU6-36P-201ENST00000384172 107 ntBASIC3.31□□□□□ -1.88
SNX27Q96L92 RNU6-4P-201ENST00000384205 107 ntBASIC3.31□□□□□ -1.88
SNX27Q96L92 RNU6-5P-201ENST00000384238 107 ntBASIC3.31□□□□□ -1.88
SNX27Q96L92 RNU6-3P-201ENST00000384314 107 ntBASIC3.31□□□□□ -1.88
SNX27Q96L92 RNU6-16P-201ENST00000384385 107 ntBASIC3.31□□□□□ -1.88
SNX27Q96L92 RNU6-15P-201ENST00000384534 107 ntBASIC3.31□□□□□ -1.88
SNX27Q96L92 RNU6-2-201ENST00000384627 107 ntBASIC3.31□□□□□ -1.88
SNX27Q96L92 RNU6-29P-201ENST00000384637 107 ntBASIC3.31□□□□□ -1.88
SNX27Q96L92 RNU6-9-201ENST00000384776 107 ntBASIC3.31□□□□□ -1.88
SNX27Q96L92 RNU6-33P-201ENST00000384793 107 ntBASIC3.31□□□□□ -1.88
SNX27Q96L92 RNU1-101P-201ENST00000391171 127 ntBASIC3.31□□□□□ -1.88
SNX27Q96L92 RAP1BP3-201ENST00000407180 549 ntBASIC3.31□□□□□ -1.88
SNX27Q96L92 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.31□□□□□ -1.88
SNX27Q96L92 RN7SKP32-201ENST00000410167 303 ntBASIC3.31□□□□□ -1.88
SNX27Q96L92 VN1R36P-201ENST00000414936 291 ntBASIC3.31□□□□□ -1.88
SNX27Q96L92 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.31□□□□□ -1.88
SNX27Q96L92 AL513043.1-201ENST00000439124 535 ntBASIC3.31□□□□□ -1.88
SNX27Q96L92 HMGN2P10-201ENST00000448085 265 ntBASIC3.31□□□□□ -1.88
SNX27Q96L92 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.31□□□□□ -1.88
SNX27Q96L92 AC233279.1-201ENST00000455300 423 ntBASIC3.31□□□□□ -1.88
SNX27Q96L92 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.31□□□□□ -1.88
SNX27Q96L92 RNA5SP217-201ENST00000515959 91 ntBASIC3.31□□□□□ -1.88
SNX27Q96L92 RNU6-864P-201ENST00000516256 108 ntBASIC3.31□□□□□ -1.88
SNX27Q96L92 SNORA64.4-201ENST00000516632 81 ntBASIC3.31□□□□□ -1.88
SNX27Q96L92 RNU6-256P-201ENST00000516747 97 ntBASIC3.31□□□□□ -1.88
SNX27Q96L92 RNU6-273P-201ENST00000516937 96 ntBASIC3.31□□□□□ -1.88
SNX27Q96L92 SNORA31.26-201ENST00000517250 137 ntBASIC3.31□□□□□ -1.88
SNX27Q96L92 AC009812.2-201ENST00000517657 457 ntBASIC3.31□□□□□ -1.88
SNX27Q96L92 AC007536.1-201ENST00000533382 349 ntBASIC3.31□□□□□ -1.88
SNX27Q96L92 AC025423.5-201ENST00000550230 219 ntBASIC3.31□□□□□ -1.88
SNX27Q96L92 AC021739.1-201ENST00000559631 174 ntBASIC3.31□□□□□ -1.88
SNX27Q96L92 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.31□□□□□ -1.88
SNX27Q96L92 SNORD53-201ENST00000579969 78 ntBASIC3.31□□□□□ -1.88
SNX27Q96L92 OR1M4P-201ENST00000589199 287 ntBASIC3.31□□□□□ -1.88
SNX27Q96L92 RNU6-6P-201ENST00000606623 107 ntBASIC3.31□□□□□ -1.88
SNX27Q96L92 AC009994.1-201ENST00000606889 253 ntBASIC3.31□□□□□ -1.88
SNX27Q96L92 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.31□□□□□ -1.88
SNX27Q96L92 MIR3199-2-201ENST00000636243 86 ntBASIC3.31□□□□□ -1.88
SNX27Q96L92 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.31□□□□□ -1.88
SNX27Q96L92 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
SNX27Q96L92 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SNX27Q96L92 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.3□□□□□ -1.88
SNX27Q96L92 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.3□□□□□ -1.88
SNX27Q96L92 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
SNX27Q96L92 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
SNX27Q96L92 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
SNX27Q96L92 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.3□□□□□ -1.88
SNX27Q96L92 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SNX27Q96L92 SNORD81.2-201ENST00000365153 76 ntBASIC3.3□□□□□ -1.88
SNX27Q96L92 RNU6-72P-201ENST00000384285 79 ntBASIC3.3□□□□□ -1.88
SNX27Q96L92 MIR518D-201ENST00000385014 87 ntBASIC3.3□□□□□ -1.88
SNX27Q96L92 RNU6-1009P-201ENST00000390996 107 ntBASIC3.3□□□□□ -1.88
SNX27Q96L92 U3.37-201ENST00000408528 213 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms