Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 RNU6-942P-201ENST00000363002 107 ntBASIC1.79□□□□□ -2.12
PKNOX2Q96KN3 SNORA72.3-201ENST00000365074 132 ntBASIC1.79□□□□□ -2.12
PKNOX2Q96KN3 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.79□□□□□ -2.12
PKNOX2Q96KN3 RNU6-843P-201ENST00000384454 104 ntBASIC1.79□□□□□ -2.12
PKNOX2Q96KN3 MIR618-201ENST00000385287 98 ntBASIC1.79□□□□□ -2.12
PKNOX2Q96KN3 AC114491.1-201ENST00000416095 246 ntBASIC1.79□□□□□ -2.12
PKNOX2Q96KN3 AC007283.2-201ENST00000424739 197 ntBASIC1.79□□□□□ -2.12
PKNOX2Q96KN3 AL589872.1-201ENST00000426602 288 ntBASIC1.79□□□□□ -2.12
PKNOX2Q96KN3 AL627311.1-201ENST00000431514 115 ntBASIC1.79□□□□□ -2.12
PKNOX2Q96KN3 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.79□□□□□ -2.12
PKNOX2Q96KN3 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.79□□□□□ -2.12
PKNOX2Q96KN3 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC1.79□□□□□ -2.12
PKNOX2Q96KN3 AC112206.3-201ENST00000514578 389 ntBASIC1.79□□□□□ -2.12
PKNOX2Q96KN3 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.79□□□□□ -2.12
PKNOX2Q96KN3 SNORA3.4-201ENST00000515969 96 ntBASIC1.79□□□□□ -2.12
PKNOX2Q96KN3 RN7SKP265-201ENST00000516448 223 ntBASIC1.79□□□□□ -2.12
PKNOX2Q96KN3 AP004607.1-201ENST00000524456 203 ntBASIC1.79□□□□□ -2.12
PKNOX2Q96KN3 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
PKNOX2Q96KN3 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
PKNOX2Q96KN3 ADI1P3-201ENST00000549509 470 ntBASIC1.79□□□□□ -2.12
PKNOX2Q96KN3 AC104581.2-201ENST00000572227 430 ntBASIC1.79□□□□□ -2.12
PKNOX2Q96KN3 AC234772.3-201ENST00000602277 528 ntBASIC1.79□□□□□ -2.12
PKNOX2Q96KN3 AL158032.1-201ENST00000605401 106 ntBASIC1.79□□□□□ -2.12
PKNOX2Q96KN3 NDUFA8P1-201ENST00000605525 367 ntBASIC1.79□□□□□ -2.12
PKNOX2Q96KN3 AC012409.4-201ENST00000612923 249 ntBASIC1.79□□□□□ -2.12
PKNOX2Q96KN3 MIR6852-201ENST00000621699 66 ntBASIC1.79□□□□□ -2.12
PKNOX2Q96KN3 MIR3529-201ENST00000637713 78 ntBASIC1.79□□□□□ -2.12
PKNOX2Q96KN3 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
PKNOX2Q96KN3 RNU6-1010P-201ENST00000362757 107 ntBASIC1.78□□□□□ -2.12
PKNOX2Q96KN3 RNU5E-5P-201ENST00000365379 116 ntBASIC1.78□□□□□ -2.12
PKNOX2Q96KN3 RNU6-72P-201ENST00000384285 79 ntBASIC1.78□□□□□ -2.12
PKNOX2Q96KN3 Y_RNA.500-201ENST00000384466 111 ntBASIC1.78□□□□□ -2.12
PKNOX2Q96KN3 RNA5SP508-201ENST00000411327 119 ntBASIC1.78□□□□□ -2.12
PKNOX2Q96KN3 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.78□□□□□ -2.12
PKNOX2Q96KN3 AC008267.5-201ENST00000424928 265 ntBASIC1.78□□□□□ -2.12
PKNOX2Q96KN3 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.78□□□□□ -2.12
PKNOX2Q96KN3 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.78□□□□□ -2.12
PKNOX2Q96KN3 MTND5P2-201ENST00000442927 1142 ntBASIC1.78□□□□□ -2.12
PKNOX2Q96KN3 AC096638.1-201ENST00000444678 216 ntBASIC1.78□□□□□ -2.12
PKNOX2Q96KN3 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.78□□□□□ -2.12
PKNOX2Q96KN3 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.78□□□□□ -2.12
PKNOX2Q96KN3 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.78□□□□□ -2.12
PKNOX2Q96KN3 snoU13.9-201ENST00000458927 103 ntBASIC1.78□□□□□ -2.12
PKNOX2Q96KN3 MTCYBP35-201ENST00000503630 1137 ntBASIC1.78□□□□□ -2.12
PKNOX2Q96KN3 AC108078.2-201ENST00000510750 236 ntBASIC1.78□□□□□ -2.12
PKNOX2Q96KN3 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.78□□□□□ -2.12
PKNOX2Q96KN3 RNA5SP182-201ENST00000516064 82 ntBASIC1.78□□□□□ -2.12
PKNOX2Q96KN3 RNU6-902P-201ENST00000517212 91 ntBASIC1.78□□□□□ -2.12
PKNOX2Q96KN3 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.78□□□□□ -2.12
PKNOX2Q96KN3 AL512310.1-201ENST00000548639 172 ntBASIC1.78□□□□□ -2.12
PKNOX2Q96KN3 CR383656.8-201ENST00000549046 145 ntBASIC1.78□□□□□ -2.12
PKNOX2Q96KN3 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.78□□□□□ -2.12
PKNOX2Q96KN3 MIR1273D-201ENST00000577266 86 ntBASIC1.78□□□□□ -2.12
PKNOX2Q96KN3 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.78□□□□□ -2.12
PKNOX2Q96KN3 AL138889.2-201ENST00000603883 242 ntBASIC1.78□□□□□ -2.12
PKNOX2Q96KN3 AL139286.2-201ENST00000606838 396 ntBASIC1.78□□□□□ -2.12
PKNOX2Q96KN3 AC093788.1-201ENST00000609356 927 ntBASIC1.78□□□□□ -2.12
PKNOX2Q96KN3 AC004223.4-201ENST00000612426 332 ntBASIC1.78□□□□□ -2.12
PKNOX2Q96KN3 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.78□□□□□ -2.12
PKNOX2Q96KN3 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
PKNOX2Q96KN3 HAUS6P2-201ENST00000433254 2404 ntBASIC1.78□□□□□ -2.12
PKNOX2Q96KN3 SNORD14B-201ENST00000364533 90 ntBASIC1.77□□□□□ -2.13
PKNOX2Q96KN3 RNU6-487P-201ENST00000365430 104 ntBASIC1.77□□□□□ -2.13
PKNOX2Q96KN3 MIR558-201ENST00000384920 94 ntBASIC1.77□□□□□ -2.13
PKNOX2Q96KN3 AL031779.1-201ENST00000415663 330 ntBASIC1.77□□□□□ -2.13
PKNOX2Q96KN3 AC138623.1-201ENST00000418060 216 ntBASIC1.77□□□□□ -2.13
PKNOX2Q96KN3 AC011233.1-201ENST00000422812 283 ntBASIC1.77□□□□□ -2.13
PKNOX2Q96KN3 CST2P1-201ENST00000425770 87 ntBASIC1.77□□□□□ -2.13
PKNOX2Q96KN3 MED13P1-201ENST00000428342 171 ntBASIC1.77□□□□□ -2.13
PKNOX2Q96KN3 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.77□□□□□ -2.13
PKNOX2Q96KN3 RPS24P1-201ENST00000438550 371 ntBASIC1.77□□□□□ -2.13
PKNOX2Q96KN3 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
PKNOX2Q96KN3 EPS15P1-201ENST00000448836 336 ntBASIC1.77□□□□□ -2.13
PKNOX2Q96KN3 ZNF114P1-201ENST00000453500 292 ntBASIC1.77□□□□□ -2.13
PKNOX2Q96KN3 AC132942.1-201ENST00000486753 483 ntBASIC1.77□□□□□ -2.13
PKNOX2Q96KN3 HMGB1P30-201ENST00000492455 606 ntBASIC1.77□□□□□ -2.13
PKNOX2Q96KN3 AC119751.5-201ENST00000514077 770 ntBASIC1.77□□□□□ -2.13
PKNOX2Q96KN3 RNU6-123P-201ENST00000516163 102 ntBASIC1.77□□□□□ -2.13
PKNOX2Q96KN3 RNU6-415P-201ENST00000516252 97 ntBASIC1.77□□□□□ -2.13
PKNOX2Q96KN3 AC109329.1-201ENST00000518744 317 ntBASIC1.77□□□□□ -2.13
PKNOX2Q96KN3 AP005597.4-201ENST00000526762 229 ntBASIC1.77□□□□□ -2.13
PKNOX2Q96KN3 AC022878.1-201ENST00000530684 149 ntBASIC1.77□□□□□ -2.13
PKNOX2Q96KN3 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.77□□□□□ -2.13
PKNOX2Q96KN3 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.77□□□□□ -2.13
PKNOX2Q96KN3 MIR4255-201ENST00000579351 72 ntBASIC1.77□□□□□ -2.13
PKNOX2Q96KN3 MIR548AC-201ENST00000585049 88 ntBASIC1.77□□□□□ -2.13
PKNOX2Q96KN3 HMGN1P30-201ENST00000589286 268 ntBASIC1.77□□□□□ -2.13
PKNOX2Q96KN3 RPL30P11-203ENST00000598995 310 ntBASIC1.77□□□□□ -2.13
PKNOX2Q96KN3 BNIP3P30-201ENST00000601184 574 ntBASIC1.77□□□□□ -2.13
PKNOX2Q96KN3 AC073410.2-201ENST00000603240 332 ntBASIC1.77□□□□□ -2.13
PKNOX2Q96KN3 AC112191.3-201ENST00000604371 277 ntBASIC1.77□□□□□ -2.13
PKNOX2Q96KN3 U6.42-201ENST00000618440 107 ntBASIC1.77□□□□□ -2.13
PKNOX2Q96KN3 AC099654.13-201ENST00000639774 207 ntBASIC1.77□□□□□ -2.13
PKNOX2Q96KN3 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.76□□□□□ -2.13
PKNOX2Q96KN3 RNU5F-7P-201ENST00000363696 115 ntBASIC1.76□□□□□ -2.13
PKNOX2Q96KN3 MIR10A-201ENST00000385043 110 ntBASIC1.76□□□□□ -2.13
PKNOX2Q96KN3 AL591034.2-201ENST00000402839 359 ntBASIC1.76□□□□□ -2.13
PKNOX2Q96KN3 RNU2-39P-201ENST00000410604 198 ntBASIC1.76□□□□□ -2.13
PKNOX2Q96KN3 HIGD1AP15-201ENST00000416198 280 ntBASIC1.76□□□□□ -2.13
PKNOX2Q96KN3 ELOCP4-201ENST00000420090 333 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 153.4 ms