Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
VPS50Q96JG6 HMGN2P15-201ENST00000585707 270 ntBASIC3.2□□□□□ -1.9
VPS50Q96JG6 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.2□□□□□ -1.9
VPS50Q96JG6 AC073308.1-201ENST00000623696 305 ntBASIC3.2□□□□□ -1.9
VPS50Q96JG6 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
VPS50Q96JG6 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
VPS50Q96JG6 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.2□□□□□ -1.9
VPS50Q96JG6 FAM35BP-202ENST00000497389 3337 ntBASIC3.2□□□□□ -1.9
VPS50Q96JG6 RNU6-428P-201ENST00000362942 107 ntBASIC3.19□□□□□ -1.9
VPS50Q96JG6 Y_RNA.315-201ENST00000365117 102 ntBASIC3.19□□□□□ -1.9
VPS50Q96JG6 Y_RNA.404-201ENST00000383978 102 ntBASIC3.19□□□□□ -1.9
VPS50Q96JG6 MIR34A-201ENST00000385130 110 ntBASIC3.19□□□□□ -1.9
VPS50Q96JG6 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
VPS50Q96JG6 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
VPS50Q96JG6 AL030996.1-201ENST00000411430 235 ntBASIC3.19□□□□□ -1.9
VPS50Q96JG6 Z99755.1-201ENST00000414048 380 ntBASIC3.19□□□□□ -1.9
VPS50Q96JG6 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.19□□□□□ -1.9
VPS50Q96JG6 MTCO2P12-201ENST00000427426 682 ntBASIC3.19□□□□□ -1.9
VPS50Q96JG6 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.19□□□□□ -1.9
VPS50Q96JG6 SAR1AP4-201ENST00000429225 591 ntBASIC3.19□□□□□ -1.9
VPS50Q96JG6 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.19□□□□□ -1.9
VPS50Q96JG6 AL645568.3-201ENST00000433683 316 ntBASIC3.19□□□□□ -1.9
VPS50Q96JG6 CYCSP32-201ENST00000440548 321 ntBASIC3.19□□□□□ -1.9
VPS50Q96JG6 FTH1P25-201ENST00000447665 469 ntBASIC3.19□□□□□ -1.9
VPS50Q96JG6 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.19□□□□□ -1.9
VPS50Q96JG6 RPL30P15-201ENST00000457129 321 ntBASIC3.19□□□□□ -1.9
VPS50Q96JG6 RPL7P42-201ENST00000481005 679 ntBASIC3.19□□□□□ -1.9
VPS50Q96JG6 AC027575.1-201ENST00000481064 460 ntBASIC3.19□□□□□ -1.9
VPS50Q96JG6 AC018437.1-201ENST00000492214 406 ntBASIC3.19□□□□□ -1.9
VPS50Q96JG6 RNU1-54P-201ENST00000517181 120 ntBASIC3.19□□□□□ -1.9
VPS50Q96JG6 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
VPS50Q96JG6 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.19□□□□□ -1.9
VPS50Q96JG6 LINC00933-203ENST00000559812 219 ntBASIC3.19□□□□□ -1.9
VPS50Q96JG6 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.19□□□□□ -1.9
VPS50Q96JG6 AC020895.1-201ENST00000595362 272 ntBASIC3.19□□□□□ -1.9
VPS50Q96JG6 AL355598.1-201ENST00000604169 202 ntBASIC3.19□□□□□ -1.9
VPS50Q96JG6 AC073657.2-201ENST00000605661 303 ntBASIC3.19□□□□□ -1.9
VPS50Q96JG6 AC009229.3-201ENST00000608056 282 ntBASIC3.19□□□□□ -1.9
VPS50Q96JG6 AC011890.2-201ENST00000613393 294 ntBASIC3.19□□□□□ -1.9
VPS50Q96JG6 AC090617.7-201ENST00000623952 126 ntBASIC3.19□□□□□ -1.9
VPS50Q96JG6 AL669831.3-213ENST00000636676 183 ntBASIC3.19□□□□□ -1.9
VPS50Q96JG6 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
VPS50Q96JG6 KPNA2P1-201ENST00000458289 1591 ntBASIC3.19□□□□□ -1.9
VPS50Q96JG6 AL353743.1-202ENST00000431724 1695 ntBASIC3.19□□□□□ -1.9
VPS50Q96JG6 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
VPS50Q96JG6 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
VPS50Q96JG6 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
VPS50Q96JG6 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.18□□□□□ -1.9
VPS50Q96JG6 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
VPS50Q96JG6 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
VPS50Q96JG6 MIR369-201ENST00000362155 70 ntBASIC3.18□□□□□ -1.9
VPS50Q96JG6 Y_RNA.431-201ENST00000384086 102 ntBASIC3.18□□□□□ -1.9
VPS50Q96JG6 SNORA9-201ENST00000384215 133 ntBASIC3.18□□□□□ -1.9
VPS50Q96JG6 RNU6-310P-201ENST00000384655 107 ntBASIC3.18□□□□□ -1.9
VPS50Q96JG6 MIR517A-201ENST00000385001 87 ntBASIC3.18□□□□□ -1.9
VPS50Q96JG6 SNORA75.4-201ENST00000391278 119 ntBASIC3.18□□□□□ -1.9
VPS50Q96JG6 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.18□□□□□ -1.9
VPS50Q96JG6 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.18□□□□□ -1.9
VPS50Q96JG6 Y_RNA.594-201ENST00000410373 140 ntBASIC3.18□□□□□ -1.9
VPS50Q96JG6 RNU6-1050P-201ENST00000410388 107 ntBASIC3.18□□□□□ -1.9
VPS50Q96JG6 Y_RNA.646-201ENST00000410980 101 ntBASIC3.18□□□□□ -1.9
VPS50Q96JG6 RNU6-325P-201ENST00000411132 105 ntBASIC3.18□□□□□ -1.9
VPS50Q96JG6 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.18□□□□□ -1.9
VPS50Q96JG6 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.18□□□□□ -1.9
VPS50Q96JG6 AL117339.3-201ENST00000418733 162 ntBASIC3.18□□□□□ -1.9
VPS50Q96JG6 DBIP2-201ENST00000419076 262 ntBASIC3.18□□□□□ -1.9
VPS50Q96JG6 TOMM20P4-201ENST00000427861 435 ntBASIC3.18□□□□□ -1.9
VPS50Q96JG6 AC005300.1-201ENST00000428401 373 ntBASIC3.18□□□□□ -1.9
VPS50Q96JG6 AC005326.1-201ENST00000429197 123 ntBASIC3.18□□□□□ -1.9
VPS50Q96JG6 AC104332.2-201ENST00000429959 156 ntBASIC3.18□□□□□ -1.9
VPS50Q96JG6 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.18□□□□□ -1.9
VPS50Q96JG6 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.18□□□□□ -1.9
VPS50Q96JG6 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.18□□□□□ -1.9
VPS50Q96JG6 RPL26P9-201ENST00000457466 433 ntBASIC3.18□□□□□ -1.9
VPS50Q96JG6 RN7SL75P-201ENST00000461926 281 ntBASIC3.18□□□□□ -1.9
VPS50Q96JG6 SNORA74D-201ENST00000516404 141 ntBASIC3.18□□□□□ -1.9
VPS50Q96JG6 IGKV2-26-201ENST00000518305 343 ntBASIC3.18□□□□□ -1.9
VPS50Q96JG6 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.18□□□□□ -1.9
VPS50Q96JG6 AC010653.1-201ENST00000571108 881 ntBASIC3.18□□□□□ -1.9
VPS50Q96JG6 AL451007.1-201ENST00000595491 289 ntBASIC3.18□□□□□ -1.9
VPS50Q96JG6 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.18□□□□□ -1.9
VPS50Q96JG6 AC018462.2-201ENST00000605375 395 ntBASIC3.18□□□□□ -1.9
VPS50Q96JG6 AC080078.3-201ENST00000605407 463 ntBASIC3.18□□□□□ -1.9
VPS50Q96JG6 AP000654.2-201ENST00000605633 586 ntBASIC3.18□□□□□ -1.9
VPS50Q96JG6 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.18□□□□□ -1.9
VPS50Q96JG6 AC098657.3-201ENST00000620434 263 ntBASIC3.18□□□□□ -1.9
VPS50Q96JG6 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
VPS50Q96JG6 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.18□□□□□ -1.9
VPS50Q96JG6 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.17□□□□□ -1.9
VPS50Q96JG6 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
VPS50Q96JG6 U8.9-201ENST00000365667 134 ntBASIC3.17□□□□□ -1.9
VPS50Q96JG6 XGY1-201ENST00000381172 446 ntBASIC3.17□□□□□ -1.9
VPS50Q96JG6 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.17□□□□□ -1.9
VPS50Q96JG6 MIR1289-1-201ENST00000408836 144 ntBASIC3.17□□□□□ -1.9
VPS50Q96JG6 RNU4-47P-201ENST00000410876 114 ntBASIC3.17□□□□□ -1.9
VPS50Q96JG6 BPY2DP-201ENST00000422208 265 ntBASIC3.17□□□□□ -1.9
VPS50Q96JG6 RPL37P4-201ENST00000448908 268 ntBASIC3.17□□□□□ -1.9
VPS50Q96JG6 RNU7-152P-201ENST00000458982 64 ntBASIC3.17□□□□□ -1.9
VPS50Q96JG6 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.17□□□□□ -1.9
VPS50Q96JG6 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 284.7 ms