Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 DEFA7P-201ENST00000382676 285 ntBASIC2.5□□□□□ -2.01
PDLIM5Q96HC4 RNU1-52P-201ENST00000384190 164 ntBASIC2.5□□□□□ -2.01
PDLIM5Q96HC4 MIR34A-201ENST00000385130 110 ntBASIC2.5□□□□□ -2.01
PDLIM5Q96HC4 RNU6-550P-201ENST00000391057 101 ntBASIC2.5□□□□□ -2.01
PDLIM5Q96HC4 FGF7P8-201ENST00000402994 292 ntBASIC2.5□□□□□ -2.01
PDLIM5Q96HC4 SNRPEP10-201ENST00000420249 274 ntBASIC2.5□□□□□ -2.01
PDLIM5Q96HC4 EIF4EP4-201ENST00000424916 578 ntBASIC2.5□□□□□ -2.01
PDLIM5Q96HC4 HMGB1P31-201ENST00000437242 427 ntBASIC2.5□□□□□ -2.01
PDLIM5Q96HC4 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.5□□□□□ -2.01
PDLIM5Q96HC4 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.5□□□□□ -2.01
PDLIM5Q96HC4 SNORD109B-201ENST00000458961 67 ntBASIC2.5□□□□□ -2.01
PDLIM5Q96HC4 SNORD109A-201ENST00000459128 67 ntBASIC2.5□□□□□ -2.01
PDLIM5Q96HC4 RNU7-180P-201ENST00000459240 63 ntBASIC2.5□□□□□ -2.01
PDLIM5Q96HC4 MTCO3P9-201ENST00000506989 781 ntBASIC2.5□□□□□ -2.01
PDLIM5Q96HC4 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.5□□□□□ -2.01
PDLIM5Q96HC4 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.5□□□□□ -2.01
PDLIM5Q96HC4 RNU6-358P-201ENST00000516564 75 ntBASIC2.5□□□□□ -2.01
PDLIM5Q96HC4 RNA5SP503-201ENST00000517047 117 ntBASIC2.5□□□□□ -2.01
PDLIM5Q96HC4 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.5□□□□□ -2.01
PDLIM5Q96HC4 HIF1AP1-201ENST00000553642 175 ntBASIC2.5□□□□□ -2.01
PDLIM5Q96HC4 GTF3AP2-201ENST00000557014 266 ntBASIC2.5□□□□□ -2.01
PDLIM5Q96HC4 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.5□□□□□ -2.01
PDLIM5Q96HC4 AL033523.1-201ENST00000605153 153 ntBASIC2.5□□□□□ -2.01
PDLIM5Q96HC4 AC008945.2-201ENST00000606056 604 ntBASIC2.5□□□□□ -2.01
PDLIM5Q96HC4 DISC2.1-201ENST00000612827 205 ntBASIC2.5□□□□□ -2.01
PDLIM5Q96HC4 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.5□□□□□ -2.01
PDLIM5Q96HC4 AC024581.2-201ENST00000619986 252 ntBASIC2.5□□□□□ -2.01
PDLIM5Q96HC4 AC138627.2-201ENST00000624202 601 ntBASIC2.5□□□□□ -2.01
PDLIM5Q96HC4 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
PDLIM5Q96HC4 Z82209.1-201ENST00000422141 2135 ntBASIC2.5□□□□□ -2.01
PDLIM5Q96HC4 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.49□□□□□ -2.01
PDLIM5Q96HC4 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
PDLIM5Q96HC4 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
PDLIM5Q96HC4 HSPA8P4-201ENST00000511877 1920 ntBASIC2.49□□□□□ -2.01
PDLIM5Q96HC4 RNU6-858P-201ENST00000362436 107 ntBASIC2.49□□□□□ -2.01
PDLIM5Q96HC4 SNORD62.1-201ENST00000362541 86 ntBASIC2.49□□□□□ -2.01
PDLIM5Q96HC4 RNA5SP240-201ENST00000365355 128 ntBASIC2.49□□□□□ -2.01
PDLIM5Q96HC4 RNU6-877P-201ENST00000383868 107 ntBASIC2.49□□□□□ -2.01
PDLIM5Q96HC4 RNY3P14-201ENST00000384309 102 ntBASIC2.49□□□□□ -2.01
PDLIM5Q96HC4 MIR27B-201ENST00000385129 97 ntBASIC2.49□□□□□ -2.01
PDLIM5Q96HC4 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
PDLIM5Q96HC4 AC096664.2-201ENST00000411843 406 ntBASIC2.49□□□□□ -2.01
PDLIM5Q96HC4 OR9R1P-201ENST00000412200 877 ntBASIC2.49□□□□□ -2.01
PDLIM5Q96HC4 OR6C66P-201ENST00000414917 930 ntBASIC2.49□□□□□ -2.01
PDLIM5Q96HC4 RPL30P16-201ENST00000419341 429 ntBASIC2.49□□□□□ -2.01
PDLIM5Q96HC4 AC003685.2-201ENST00000422795 395 ntBASIC2.49□□□□□ -2.01
PDLIM5Q96HC4 AC063976.3-201ENST00000426849 329 ntBASIC2.49□□□□□ -2.01
PDLIM5Q96HC4 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.49□□□□□ -2.01
PDLIM5Q96HC4 MTATP6P23-201ENST00000440153 476 ntBASIC2.49□□□□□ -2.01
PDLIM5Q96HC4 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.49□□□□□ -2.01
PDLIM5Q96HC4 CYP2C59P-201ENST00000457790 269 ntBASIC2.49□□□□□ -2.01
PDLIM5Q96HC4 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.49□□□□□ -2.01
PDLIM5Q96HC4 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.49□□□□□ -2.01
PDLIM5Q96HC4 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.49□□□□□ -2.01
PDLIM5Q96HC4 SNORD60.2-201ENST00000516883 86 ntBASIC2.49□□□□□ -2.01
PDLIM5Q96HC4 DUXAP9-208ENST00000622815 614 ntBASIC2.49□□□□□ -2.01
PDLIM5Q96HC4 MIR3662-201ENST00000637030 95 ntBASIC2.49□□□□□ -2.01
PDLIM5Q96HC4 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
PDLIM5Q96HC4 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.49□□□□□ -2.01
PDLIM5Q96HC4 AP006437.1-201ENST00000641440 3685 ntBASIC2.48□□□□□ -2.01
PDLIM5Q96HC4 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
PDLIM5Q96HC4 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
PDLIM5Q96HC4 RNU6-1287P-201ENST00000362914 107 ntBASIC2.48□□□□□ -2.01
PDLIM5Q96HC4 RNU6-371P-201ENST00000364283 108 ntBASIC2.48□□□□□ -2.01
PDLIM5Q96HC4 RNA5SP125-201ENST00000364843 120 ntBASIC2.48□□□□□ -2.01
PDLIM5Q96HC4 RNU4-20P-201ENST00000365601 151 ntBASIC2.48□□□□□ -2.01
PDLIM5Q96HC4 RNU6-38P-201ENST00000384085 107 ntBASIC2.48□□□□□ -2.01
PDLIM5Q96HC4 RNU6-1060P-201ENST00000384664 107 ntBASIC2.48□□□□□ -2.01
PDLIM5Q96HC4 MIR518D-201ENST00000385014 87 ntBASIC2.48□□□□□ -2.01
PDLIM5Q96HC4 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
PDLIM5Q96HC4 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.48□□□□□ -2.01
PDLIM5Q96HC4 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.48□□□□□ -2.01
PDLIM5Q96HC4 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.48□□□□□ -2.01
PDLIM5Q96HC4 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC2.48□□□□□ -2.01
PDLIM5Q96HC4 CALM2P2-201ENST00000428512 440 ntBASIC2.48□□□□□ -2.01
PDLIM5Q96HC4 AL627311.1-201ENST00000431514 115 ntBASIC2.48□□□□□ -2.01
PDLIM5Q96HC4 MTND3P16-201ENST00000452205 344 ntBASIC2.48□□□□□ -2.01
PDLIM5Q96HC4 RNU6-333P-201ENST00000459117 107 ntBASIC2.48□□□□□ -2.01
PDLIM5Q96HC4 AC112771.1-201ENST00000463581 102 ntBASIC2.48□□□□□ -2.01
PDLIM5Q96HC4 RPL31P58-201ENST00000469001 379 ntBASIC2.48□□□□□ -2.01
PDLIM5Q96HC4 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.48□□□□□ -2.01
PDLIM5Q96HC4 PRDX4P1-201ENST00000507189 574 ntBASIC2.48□□□□□ -2.01
PDLIM5Q96HC4 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.48□□□□□ -2.01
PDLIM5Q96HC4 AC074344.1-201ENST00000512823 224 ntBASIC2.48□□□□□ -2.01
PDLIM5Q96HC4 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.48□□□□□ -2.01
PDLIM5Q96HC4 AC079598.5-201ENST00000547460 117 ntBASIC2.48□□□□□ -2.01
PDLIM5Q96HC4 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.48□□□□□ -2.01
PDLIM5Q96HC4 AC027176.1-201ENST00000560204 514 ntBASIC2.48□□□□□ -2.01
PDLIM5Q96HC4 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.48□□□□□ -2.01
PDLIM5Q96HC4 AC007336.1-201ENST00000576365 3828 ntBASIC2.48□□□□□ -2.01
PDLIM5Q96HC4 MIR4446-201ENST00000578505 67 ntBASIC2.48□□□□□ -2.01
PDLIM5Q96HC4 MIR548AC-201ENST00000585049 88 ntBASIC2.48□□□□□ -2.01
PDLIM5Q96HC4 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.48□□□□□ -2.01
PDLIM5Q96HC4 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.48□□□□□ -2.01
PDLIM5Q96HC4 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
PDLIM5Q96HC4 SNORA80A-201ENST00000363922 136 ntBASIC2.47□□□□□ -2.01
PDLIM5Q96HC4 Y_RNA.303-201ENST00000364998 94 ntBASIC2.47□□□□□ -2.01
PDLIM5Q96HC4 RNU6-116P-201ENST00000384042 109 ntBASIC2.47□□□□□ -2.01
PDLIM5Q96HC4 RNU1-138P-201ENST00000384093 164 ntBASIC2.47□□□□□ -2.01
PDLIM5Q96HC4 CISD1P1-201ENST00000393907 327 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 138.1 ms