Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 RPL30P11-203ENST00000598995 310 ntBASIC2.33□□□□□ -2.04
SNRNP40Q96DI7 AC091805.2-201ENST00000603848 235 ntBASIC2.33□□□□□ -2.04
SNRNP40Q96DI7 AL121917.1-203ENST00000605534 577 ntBASIC2.33□□□□□ -2.04
SNRNP40Q96DI7 AC005046.1-201ENST00000608515 625 ntBASIC2.33□□□□□ -2.04
SNRNP40Q96DI7 Z82243.1-201ENST00000609432 473 ntBASIC2.33□□□□□ -2.04
SNRNP40Q96DI7 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.33□□□□□ -2.04
SNRNP40Q96DI7 AC104073.3-201ENST00000610942 955 ntBASIC2.33□□□□□ -2.04
SNRNP40Q96DI7 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.33□□□□□ -2.04
SNRNP40Q96DI7 MIR6733-201ENST00000635723 61 ntBASIC2.33□□□□□ -2.04
SNRNP40Q96DI7 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
SNRNP40Q96DI7 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
SNRNP40Q96DI7 RNU6-623P-201ENST00000363143 105 ntBASIC2.32□□□□□ -2.04
SNRNP40Q96DI7 Y_RNA.324-201ENST00000365165 102 ntBASIC2.32□□□□□ -2.04
SNRNP40Q96DI7 SNORD70.1-201ENST00000391007 85 ntBASIC2.32□□□□□ -2.04
SNRNP40Q96DI7 AL591416.1-201ENST00000404015 867 ntBASIC2.32□□□□□ -2.04
SNRNP40Q96DI7 RNA5SP390-201ENST00000410191 113 ntBASIC2.32□□□□□ -2.04
SNRNP40Q96DI7 RNU6-1140P-201ENST00000410517 106 ntBASIC2.32□□□□□ -2.04
SNRNP40Q96DI7 RNU6-1245P-201ENST00000411130 106 ntBASIC2.32□□□□□ -2.04
SNRNP40Q96DI7 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.32□□□□□ -2.04
SNRNP40Q96DI7 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.32□□□□□ -2.04
SNRNP40Q96DI7 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.32□□□□□ -2.04
SNRNP40Q96DI7 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.32□□□□□ -2.04
SNRNP40Q96DI7 PRPS1P1-201ENST00000445305 876 ntBASIC2.32□□□□□ -2.04
SNRNP40Q96DI7 AL356010.1-201ENST00000456364 102 ntBASIC2.32□□□□□ -2.04
SNRNP40Q96DI7 RN7SL499P-201ENST00000481141 276 ntBASIC2.32□□□□□ -2.04
SNRNP40Q96DI7 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.32□□□□□ -2.04
SNRNP40Q96DI7 AC092436.1-201ENST00000506450 503 ntBASIC2.32□□□□□ -2.04
SNRNP40Q96DI7 AC008526.1-201ENST00000509149 338 ntBASIC2.32□□□□□ -2.04
SNRNP40Q96DI7 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.32□□□□□ -2.04
SNRNP40Q96DI7 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.32□□□□□ -2.04
SNRNP40Q96DI7 RNU2-53P-201ENST00000516257 147 ntBASIC2.32□□□□□ -2.04
SNRNP40Q96DI7 AC109329.1-201ENST00000518744 317 ntBASIC2.32□□□□□ -2.04
SNRNP40Q96DI7 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.32□□□□□ -2.04
SNRNP40Q96DI7 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.32□□□□□ -2.04
SNRNP40Q96DI7 AC004223.2-201ENST00000590309 544 ntBASIC2.32□□□□□ -2.04
SNRNP40Q96DI7 AC103591.3-201ENST00000608684 209 ntBASIC2.32□□□□□ -2.04
SNRNP40Q96DI7 AC107871.2-201ENST00000612894 502 ntBASIC2.32□□□□□ -2.04
SNRNP40Q96DI7 AC007792.1-201ENST00000623023 402 ntBASIC2.32□□□□□ -2.04
SNRNP40Q96DI7 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.32□□□□□ -2.04
SNRNP40Q96DI7 Z82195.2-201ENST00000612348 18351 ntBASIC2.32□□□□□ -2.04
SNRNP40Q96DI7 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SNRNP40Q96DI7 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.31□□□□□ -2.04
SNRNP40Q96DI7 MTND5P26-201ENST00000426018 1752 ntBASIC2.31□□□□□ -2.04
SNRNP40Q96DI7 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
SNRNP40Q96DI7 RNU6-78P-201ENST00000362897 107 ntBASIC2.31□□□□□ -2.04
SNRNP40Q96DI7 SNORA67.1-201ENST00000364749 141 ntBASIC2.31□□□□□ -2.04
SNRNP40Q96DI7 RNU1-52P-201ENST00000384190 164 ntBASIC2.31□□□□□ -2.04
SNRNP40Q96DI7 MIR518C-201ENST00000384822 101 ntBASIC2.31□□□□□ -2.04
SNRNP40Q96DI7 MIR186-201ENST00000384988 86 ntBASIC2.31□□□□□ -2.04
SNRNP40Q96DI7 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.31□□□□□ -2.04
SNRNP40Q96DI7 AL135786.1-201ENST00000415892 214 ntBASIC2.31□□□□□ -2.04
SNRNP40Q96DI7 MTCO2P19-201ENST00000427513 598 ntBASIC2.31□□□□□ -2.04
SNRNP40Q96DI7 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.31□□□□□ -2.04
SNRNP40Q96DI7 AL139415.2-201ENST00000431968 163 ntBASIC2.31□□□□□ -2.04
SNRNP40Q96DI7 AL451074.3-201ENST00000437709 472 ntBASIC2.31□□□□□ -2.04
SNRNP40Q96DI7 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.31□□□□□ -2.04
SNRNP40Q96DI7 AL353705.4-201ENST00000449661 238 ntBASIC2.31□□□□□ -2.04
SNRNP40Q96DI7 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
SNRNP40Q96DI7 AL118520.1-201ENST00000450770 291 ntBASIC2.31□□□□□ -2.04
SNRNP40Q96DI7 SCARNA18-201ENST00000459004 134 ntBASIC2.31□□□□□ -2.04
SNRNP40Q96DI7 AC117503.1-201ENST00000472241 394 ntBASIC2.31□□□□□ -2.04
SNRNP40Q96DI7 RPL23AP11-201ENST00000475260 469 ntBASIC2.31□□□□□ -2.04
SNRNP40Q96DI7 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.31□□□□□ -2.04
SNRNP40Q96DI7 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.31□□□□□ -2.04
SNRNP40Q96DI7 SNORA9.3-201ENST00000516383 129 ntBASIC2.31□□□□□ -2.04
SNRNP40Q96DI7 SNORA31.23-201ENST00000517219 133 ntBASIC2.31□□□□□ -2.04
SNRNP40Q96DI7 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.31□□□□□ -2.04
SNRNP40Q96DI7 IGKV3-31-201ENST00000523109 329 ntBASIC2.31□□□□□ -2.04
SNRNP40Q96DI7 AP003392.2-201ENST00000527269 208 ntBASIC2.31□□□□□ -2.04
SNRNP40Q96DI7 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.31□□□□□ -2.04
SNRNP40Q96DI7 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.31□□□□□ -2.04
SNRNP40Q96DI7 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.31□□□□□ -2.04
SNRNP40Q96DI7 MIR4648-201ENST00000580107 72 ntBASIC2.31□□□□□ -2.04
SNRNP40Q96DI7 AC023043.3-201ENST00000593113 385 ntBASIC2.31□□□□□ -2.04
SNRNP40Q96DI7 AL391646.1-201ENST00000603860 190 ntBASIC2.31□□□□□ -2.04
SNRNP40Q96DI7 AL136363.2-201ENST00000604173 851 ntBASIC2.31□□□□□ -2.04
SNRNP40Q96DI7 U4atac.1-201ENST00000618345 95 ntBASIC2.31□□□□□ -2.04
SNRNP40Q96DI7 AC022418.1-201ENST00000624118 445 ntBASIC2.31□□□□□ -2.04
SNRNP40Q96DI7 AC005609.4-201ENST00000625071 447 ntBASIC2.31□□□□□ -2.04
SNRNP40Q96DI7 AC090517.3-201ENST00000625170 141 ntBASIC2.31□□□□□ -2.04
SNRNP40Q96DI7 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SNRNP40Q96DI7 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
SNRNP40Q96DI7 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
SNRNP40Q96DI7 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SNRNP40Q96DI7 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.31□□□□□ -2.04
SNRNP40Q96DI7 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
SNRNP40Q96DI7 AL139276.1-201ENST00000311910 1001 ntBASIC2.3□□□□□ -2.04
SNRNP40Q96DI7 Y_RNA.1-201ENST00000352915 104 ntBASIC2.3□□□□□ -2.04
SNRNP40Q96DI7 RNU6-655P-201ENST00000362858 107 ntBASIC2.3□□□□□ -2.04
SNRNP40Q96DI7 RNU4-75P-201ENST00000364621 146 ntBASIC2.3□□□□□ -2.04
SNRNP40Q96DI7 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.3□□□□□ -2.04
SNRNP40Q96DI7 RNU6-259P-201ENST00000383999 107 ntBASIC2.3□□□□□ -2.04
SNRNP40Q96DI7 RNU6-517P-201ENST00000384362 110 ntBASIC2.3□□□□□ -2.04
SNRNP40Q96DI7 Y_RNA.480-201ENST00000384364 102 ntBASIC2.3□□□□□ -2.04
SNRNP40Q96DI7 RNU2-3P-201ENST00000410144 191 ntBASIC2.3□□□□□ -2.04
SNRNP40Q96DI7 USP9YP20-201ENST00000419224 558 ntBASIC2.3□□□□□ -2.04
SNRNP40Q96DI7 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SNRNP40Q96DI7 AL669831.1-202ENST00000428504 417 ntBASIC2.3□□□□□ -2.04
SNRNP40Q96DI7 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.3□□□□□ -2.04
SNRNP40Q96DI7 GTF2IP13-201ENST00000438487 386 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms