Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CTHRC1Q96CG8 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CTHRC1Q96CG8 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CTHRC1Q96CG8 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.11□□□□□ -1.91
CTHRC1Q96CG8 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CTHRC1Q96CG8 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.1□□□□□ -1.91
CTHRC1Q96CG8 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.1□□□□□ -1.91
CTHRC1Q96CG8 PWAR6-201ENST00000552334 4618 ntBASIC3.1□□□□□ -1.91
CTHRC1Q96CG8 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.1□□□□□ -1.91
CTHRC1Q96CG8 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CTHRC1Q96CG8 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CTHRC1Q96CG8 RNU6-1115P-201ENST00000362490 106 ntBASIC3.1□□□□□ -1.91
CTHRC1Q96CG8 Y_RNA.216-201ENST00000364205 93 ntBASIC3.1□□□□□ -1.91
CTHRC1Q96CG8 RNA5SP267-201ENST00000364893 126 ntBASIC3.1□□□□□ -1.91
CTHRC1Q96CG8 SNORA33.2-201ENST00000365413 134 ntBASIC3.1□□□□□ -1.91
CTHRC1Q96CG8 AC117470.1-201ENST00000381974 330 ntBASIC3.1□□□□□ -1.91
CTHRC1Q96CG8 SNORA22B-201ENST00000383876 138 ntBASIC3.1□□□□□ -1.91
CTHRC1Q96CG8 Y_RNA.463-201ENST00000384271 102 ntBASIC3.1□□□□□ -1.91
CTHRC1Q96CG8 MIR606-201ENST00000384851 96 ntBASIC3.1□□□□□ -1.91
CTHRC1Q96CG8 MIR591-201ENST00000385290 95 ntBASIC3.1□□□□□ -1.91
CTHRC1Q96CG8 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CTHRC1Q96CG8 RPS29P13-201ENST00000402041 169 ntBASIC3.1□□□□□ -1.91
CTHRC1Q96CG8 AL591034.2-201ENST00000402839 359 ntBASIC3.1□□□□□ -1.91
CTHRC1Q96CG8 RNA5SP38-201ENST00000410750 119 ntBASIC3.1□□□□□ -1.91
CTHRC1Q96CG8 RNU6-1245P-201ENST00000411130 106 ntBASIC3.1□□□□□ -1.91
CTHRC1Q96CG8 AC096664.2-201ENST00000411843 406 ntBASIC3.1□□□□□ -1.91
CTHRC1Q96CG8 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.1□□□□□ -1.91
CTHRC1Q96CG8 BX679664.1-201ENST00000434429 253 ntBASIC3.1□□□□□ -1.91
CTHRC1Q96CG8 AC012308.1-201ENST00000451232 178 ntBASIC3.1□□□□□ -1.91
CTHRC1Q96CG8 NIPA2P5-201ENST00000452282 464 ntBASIC3.1□□□□□ -1.91
CTHRC1Q96CG8 Y_RNA.661-201ENST00000516003 99 ntBASIC3.1□□□□□ -1.91
CTHRC1Q96CG8 RNU6-327P-201ENST00000516270 127 ntBASIC3.1□□□□□ -1.91
CTHRC1Q96CG8 NDUFB9P3-201ENST00000521269 501 ntBASIC3.1□□□□□ -1.91
CTHRC1Q96CG8 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.1□□□□□ -1.91
CTHRC1Q96CG8 AC021739.1-201ENST00000559631 174 ntBASIC3.1□□□□□ -1.91
CTHRC1Q96CG8 MTCO3P13-201ENST00000577757 781 ntBASIC3.1□□□□□ -1.91
CTHRC1Q96CG8 AC005046.1-201ENST00000608515 625 ntBASIC3.1□□□□□ -1.91
CTHRC1Q96CG8 AC040896.1-201ENST00000613819 479 ntBASIC3.1□□□□□ -1.91
CTHRC1Q96CG8 AC083806.3-201ENST00000614016 455 ntBASIC3.1□□□□□ -1.91
CTHRC1Q96CG8 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.1□□□□□ -1.91
CTHRC1Q96CG8 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.1□□□□□ -1.91
CTHRC1Q96CG8 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.1□□□□□ -1.91
CTHRC1Q96CG8 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
CTHRC1Q96CG8 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.1□□□□□ -1.91
CTHRC1Q96CG8 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.1□□□□□ -1.91
CTHRC1Q96CG8 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.1□□□□□ -1.91
CTHRC1Q96CG8 MTND5P30-201ENST00000452896 1731 ntBASIC3.1□□□□□ -1.91
CTHRC1Q96CG8 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
CTHRC1Q96CG8 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.09□□□□□ -1.91
CTHRC1Q96CG8 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CTHRC1Q96CG8 CDC27P3-201ENST00000635418 1910 ntBASIC3.09□□□□□ -1.91
CTHRC1Q96CG8 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CTHRC1Q96CG8 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CTHRC1Q96CG8 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.09□□□□□ -1.91
CTHRC1Q96CG8 RNU1-75P-201ENST00000347264 129 ntBASIC3.09□□□□□ -1.91
CTHRC1Q96CG8 Y_RNA.5-201ENST00000362334 102 ntBASIC3.09□□□□□ -1.91
CTHRC1Q96CG8 RNU6-858P-201ENST00000362436 107 ntBASIC3.09□□□□□ -1.91
CTHRC1Q96CG8 Y_RNA.31-201ENST00000362574 102 ntBASIC3.09□□□□□ -1.91
CTHRC1Q96CG8 RNU1-70P-201ENST00000362618 164 ntBASIC3.09□□□□□ -1.91
CTHRC1Q96CG8 Y_RNA.252-201ENST00000364556 101 ntBASIC3.09□□□□□ -1.91
CTHRC1Q96CG8 RNU6-336P-201ENST00000364891 107 ntBASIC3.09□□□□□ -1.91
CTHRC1Q96CG8 RNU6-639P-201ENST00000384074 107 ntBASIC3.09□□□□□ -1.91
CTHRC1Q96CG8 Y_RNA.428-201ENST00000384078 102 ntBASIC3.09□□□□□ -1.91
CTHRC1Q96CG8 RNU6-308P-201ENST00000390957 107 ntBASIC3.09□□□□□ -1.91
CTHRC1Q96CG8 PMCHL1-202ENST00000423102 261 ntBASIC3.09□□□□□ -1.91
CTHRC1Q96CG8 AC018865.2-201ENST00000423631 129 ntBASIC3.09□□□□□ -1.91
CTHRC1Q96CG8 BX276092.3-201ENST00000424182 230 ntBASIC3.09□□□□□ -1.91
CTHRC1Q96CG8 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.09□□□□□ -1.91
CTHRC1Q96CG8 HMGN2P10-201ENST00000448085 265 ntBASIC3.09□□□□□ -1.91
CTHRC1Q96CG8 AC010099.1-201ENST00000455434 375 ntBASIC3.09□□□□□ -1.91
CTHRC1Q96CG8 AC116655.1-201ENST00000508324 901 ntBASIC3.09□□□□□ -1.91
CTHRC1Q96CG8 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.09□□□□□ -1.91
CTHRC1Q96CG8 RNU6-1045P-201ENST00000516321 107 ntBASIC3.09□□□□□ -1.91
CTHRC1Q96CG8 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.09□□□□□ -1.91
CTHRC1Q96CG8 SNORD116.3-201ENST00000517176 78 ntBASIC3.09□□□□□ -1.91
CTHRC1Q96CG8 RN7SKP295-201ENST00000517264 153 ntBASIC3.09□□□□□ -1.91
CTHRC1Q96CG8 AP000867.2-201ENST00000532468 320 ntBASIC3.09□□□□□ -1.91
CTHRC1Q96CG8 CR383656.8-201ENST00000549046 145 ntBASIC3.09□□□□□ -1.91
CTHRC1Q96CG8 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.09□□□□□ -1.91
CTHRC1Q96CG8 BNIP3P16-201ENST00000589779 534 ntBASIC3.09□□□□□ -1.91
CTHRC1Q96CG8 AC020895.1-201ENST00000595362 272 ntBASIC3.09□□□□□ -1.91
CTHRC1Q96CG8 AC096577.2-201ENST00000611455 153 ntBASIC3.09□□□□□ -1.91
CTHRC1Q96CG8 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.09□□□□□ -1.91
CTHRC1Q96CG8 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.09□□□□□ -1.91
CTHRC1Q96CG8 AC090617.7-201ENST00000623952 126 ntBASIC3.09□□□□□ -1.91
CTHRC1Q96CG8 AC073476.4-201ENST00000628409 72 ntBASIC3.09□□□□□ -1.91
CTHRC1Q96CG8 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
CTHRC1Q96CG8 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.09□□□□□ -1.92
CTHRC1Q96CG8 Z83843.1-201ENST00000604070 3685 ntBASIC3.09□□□□□ -1.92
CTHRC1Q96CG8 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.92
CTHRC1Q96CG8 AC007256.1-201ENST00000392253 2765 ntBASIC3.09□□□□□ -1.92
CTHRC1Q96CG8 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.09□□□□□ -1.92
CTHRC1Q96CG8 AC007496.3-201ENST00000624987 3443 ntBASIC3.09□□□□□ -1.92
CTHRC1Q96CG8 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.08□□□□□ -1.92
CTHRC1Q96CG8 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CTHRC1Q96CG8 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CTHRC1Q96CG8 RNU6-227P-201ENST00000362865 103 ntBASIC3.08□□□□□ -1.92
CTHRC1Q96CG8 RNU6-105P-201ENST00000363909 104 ntBASIC3.08□□□□□ -1.92
CTHRC1Q96CG8 RNA5SP387-201ENST00000364226 106 ntBASIC3.08□□□□□ -1.92
CTHRC1Q96CG8 RNU1-100P-201ENST00000365255 165 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 172.6 ms