Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 Y_RNA.301-201ENST00000364990 103 ntBASIC3.62□□□□□ -1.83
CHMP4CQ96CF2 SNORA51.4-201ENST00000364993 124 ntBASIC3.62□□□□□ -1.83
CHMP4CQ96CF2 RNU6-1329P-201ENST00000365664 107 ntBASIC3.62□□□□□ -1.83
CHMP4CQ96CF2 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.62□□□□□ -1.83
CHMP4CQ96CF2 UBE2V1P4-201ENST00000425374 344 ntBASIC3.62□□□□□ -1.83
CHMP4CQ96CF2 RPL32P28-201ENST00000443577 397 ntBASIC3.62□□□□□ -1.83
CHMP4CQ96CF2 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.62□□□□□ -1.83
CHMP4CQ96CF2 MRPL50P4-201ENST00000446432 475 ntBASIC3.62□□□□□ -1.83
CHMP4CQ96CF2 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.62□□□□□ -1.83
CHMP4CQ96CF2 AL441985.1-201ENST00000457727 251 ntBASIC3.62□□□□□ -1.83
CHMP4CQ96CF2 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.62□□□□□ -1.83
CHMP4CQ96CF2 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.62□□□□□ -1.83
CHMP4CQ96CF2 MTND4LP22-201ENST00000508209 276 ntBASIC3.62□□□□□ -1.83
CHMP4CQ96CF2 AC096745.1-201ENST00000509945 370 ntBASIC3.62□□□□□ -1.83
CHMP4CQ96CF2 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.62□□□□□ -1.83
CHMP4CQ96CF2 RNU6-566P-201ENST00000516790 107 ntBASIC3.62□□□□□ -1.83
CHMP4CQ96CF2 AC107016.2-201ENST00000547968 190 ntBASIC3.62□□□□□ -1.83
CHMP4CQ96CF2 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.62□□□□□ -1.83
CHMP4CQ96CF2 AC091135.1-201ENST00000585943 307 ntBASIC3.62□□□□□ -1.83
CHMP4CQ96CF2 ELOCP5-201ENST00000604924 333 ntBASIC3.62□□□□□ -1.83
CHMP4CQ96CF2 AC009994.1-201ENST00000606889 253 ntBASIC3.62□□□□□ -1.83
CHMP4CQ96CF2 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CHMP4CQ96CF2 AC008264.2-201ENST00000610193 3731 ntBASIC3.61□□□□□ -1.83
CHMP4CQ96CF2 RNU6-942P-201ENST00000363002 107 ntBASIC3.61□□□□□ -1.83
CHMP4CQ96CF2 RNU6-527P-201ENST00000363425 104 ntBASIC3.61□□□□□ -1.83
CHMP4CQ96CF2 RNU6-827P-201ENST00000365553 106 ntBASIC3.61□□□□□ -1.83
CHMP4CQ96CF2 SNORD116-11-201ENST00000383882 92 ntBASIC3.61□□□□□ -1.83
CHMP4CQ96CF2 SNORD116-20-201ENST00000384529 92 ntBASIC3.61□□□□□ -1.83
CHMP4CQ96CF2 MIR147B-201ENST00000390185 80 ntBASIC3.61□□□□□ -1.83
CHMP4CQ96CF2 AL138885.1-201ENST00000405921 675 ntBASIC3.61□□□□□ -1.83
CHMP4CQ96CF2 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.61□□□□□ -1.83
CHMP4CQ96CF2 RPS15AP10-201ENST00000432472 382 ntBASIC3.61□□□□□ -1.83
CHMP4CQ96CF2 HMGB1P18-201ENST00000438801 619 ntBASIC3.61□□□□□ -1.83
CHMP4CQ96CF2 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.61□□□□□ -1.83
CHMP4CQ96CF2 AK3P2-201ENST00000507976 429 ntBASIC3.61□□□□□ -1.83
CHMP4CQ96CF2 RPL39P5-202ENST00000512505 151 ntBASIC3.61□□□□□ -1.83
CHMP4CQ96CF2 Y_RNA.682-201ENST00000516457 100 ntBASIC3.61□□□□□ -1.83
CHMP4CQ96CF2 RNU6-1088P-201ENST00000516850 104 ntBASIC3.61□□□□□ -1.83
CHMP4CQ96CF2 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.61□□□□□ -1.83
CHMP4CQ96CF2 MIR4790-201ENST00000577799 79 ntBASIC3.61□□□□□ -1.83
CHMP4CQ96CF2 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.61□□□□□ -1.83
CHMP4CQ96CF2 TPTEP1-208ENST00000636884 213 ntBASIC3.61□□□□□ -1.83
CHMP4CQ96CF2 U4.7-201ENST00000638126 106 ntBASIC3.61□□□□□ -1.83
CHMP4CQ96CF2 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.61□□□□□ -1.83
CHMP4CQ96CF2 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CHMP4CQ96CF2 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CHMP4CQ96CF2 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CHMP4CQ96CF2 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CHMP4CQ96CF2 ZNF519P1-201ENST00000449011 1626 ntBASIC3.6□□□□□ -1.83
CHMP4CQ96CF2 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.6□□□□□ -1.83
CHMP4CQ96CF2 Y_RNA.135-201ENST00000363439 95 ntBASIC3.6□□□□□ -1.83
CHMP4CQ96CF2 U8.9-201ENST00000365667 134 ntBASIC3.6□□□□□ -1.83
CHMP4CQ96CF2 SNORA26.7-201ENST00000391288 122 ntBASIC3.6□□□□□ -1.83
CHMP4CQ96CF2 AL356432.1-201ENST00000405809 419 ntBASIC3.6□□□□□ -1.83
CHMP4CQ96CF2 AL031121.1-201ENST00000406553 254 ntBASIC3.6□□□□□ -1.83
CHMP4CQ96CF2 AC124916.1-201ENST00000444020 547 ntBASIC3.6□□□□□ -1.83
CHMP4CQ96CF2 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.6□□□□□ -1.83
CHMP4CQ96CF2 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.6□□□□□ -1.83
CHMP4CQ96CF2 S100A11P2-201ENST00000467589 312 ntBASIC3.6□□□□□ -1.83
CHMP4CQ96CF2 MED28P2-201ENST00000475771 317 ntBASIC3.6□□□□□ -1.83
CHMP4CQ96CF2 RN7SL633P-201ENST00000488974 297 ntBASIC3.6□□□□□ -1.83
CHMP4CQ96CF2 MTCO1P29-201ENST00000496868 288 ntBASIC3.6□□□□□ -1.83
CHMP4CQ96CF2 AC092436.3-201ENST00000511788 257 ntBASIC3.6□□□□□ -1.83
CHMP4CQ96CF2 RNU5F-8P-201ENST00000515941 111 ntBASIC3.6□□□□□ -1.83
CHMP4CQ96CF2 RN7SKP272-201ENST00000516988 232 ntBASIC3.6□□□□□ -1.83
CHMP4CQ96CF2 RNA5SP454-201ENST00000517231 127 ntBASIC3.6□□□□□ -1.83
CHMP4CQ96CF2 COPS8P3-201ENST00000526024 482 ntBASIC3.6□□□□□ -1.83
CHMP4CQ96CF2 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.6□□□□□ -1.83
CHMP4CQ96CF2 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.6□□□□□ -1.83
CHMP4CQ96CF2 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.6□□□□□ -1.83
CHMP4CQ96CF2 AC009163.5-201ENST00000575421 637 ntBASIC3.6□□□□□ -1.83
CHMP4CQ96CF2 AC091152.3-201ENST00000604227 325 ntBASIC3.6□□□□□ -1.83
CHMP4CQ96CF2 AL033523.1-201ENST00000605153 153 ntBASIC3.6□□□□□ -1.83
CHMP4CQ96CF2 AL121917.1-203ENST00000605534 577 ntBASIC3.6□□□□□ -1.83
CHMP4CQ96CF2 AC135507.2-201ENST00000612443 309 ntBASIC3.6□□□□□ -1.83
CHMP4CQ96CF2 AC104237.2-201ENST00000612456 443 ntBASIC3.6□□□□□ -1.83
CHMP4CQ96CF2 UCA1.1-201ENST00000620952 75 ntBASIC3.6□□□□□ -1.83
CHMP4CQ96CF2 AL133216.2-202ENST00000634512 349 ntBASIC3.6□□□□□ -1.83
CHMP4CQ96CF2 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CHMP4CQ96CF2 MIR22-201ENST00000362190 85 ntBASIC3.59□□□□□ -1.83
CHMP4CQ96CF2 SNORA44-201ENST00000384584 132 ntBASIC3.59□□□□□ -1.83
CHMP4CQ96CF2 UBA52P6-201ENST00000399822 382 ntBASIC3.59□□□□□ -1.83
CHMP4CQ96CF2 AL117339.3-201ENST00000418733 162 ntBASIC3.59□□□□□ -1.83
CHMP4CQ96CF2 RPL7P37-201ENST00000425095 738 ntBASIC3.59□□□□□ -1.83
CHMP4CQ96CF2 AC009414.1-201ENST00000427200 443 ntBASIC3.59□□□□□ -1.83
CHMP4CQ96CF2 AL591043.1-201ENST00000432461 424 ntBASIC3.59□□□□□ -1.83
CHMP4CQ96CF2 RPS29P12-201ENST00000460178 152 ntBASIC3.59□□□□□ -1.83
CHMP4CQ96CF2 AC130509.1-201ENST00000464158 433 ntBASIC3.59□□□□□ -1.83
CHMP4CQ96CF2 GZMAP1-201ENST00000503054 631 ntBASIC3.59□□□□□ -1.83
CHMP4CQ96CF2 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.59□□□□□ -1.83
CHMP4CQ96CF2 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.59□□□□□ -1.83
CHMP4CQ96CF2 EIF4BP1-201ENST00000554881 351 ntBASIC3.59□□□□□ -1.83
CHMP4CQ96CF2 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.59□□□□□ -1.83
CHMP4CQ96CF2 MIR3529-201ENST00000637713 78 ntBASIC3.59□□□□□ -1.83
CHMP4CQ96CF2 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
CHMP4CQ96CF2 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.59□□□□□ -1.84
CHMP4CQ96CF2 MTND5P19-201ENST00000424872 1794 ntBASIC3.58□□□□□ -1.84
CHMP4CQ96CF2 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CHMP4CQ96CF2 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
CHMP4CQ96CF2 Y_RNA.184-201ENST00000363884 108 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms