Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.47□□□□□ -2.33
TTC28Q96AY4 AL451054.2-201ENST00000420896 202 ntBASIC0.47□□□□□ -2.33
TTC28Q96AY4 AL590623.1-201ENST00000427864 105 ntBASIC0.47□□□□□ -2.33
TTC28Q96AY4 FABP5P14-201ENST00000437273 393 ntBASIC0.47□□□□□ -2.33
TTC28Q96AY4 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC0.47□□□□□ -2.33
TTC28Q96AY4 OFD1P3Y-201ENST00000453312 783 ntBASIC0.47□□□□□ -2.33
TTC28Q96AY4 AP003484.1-201ENST00000530974 250 ntBASIC0.47□□□□□ -2.33
TTC28Q96AY4 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.47□□□□□ -2.33
TTC28Q96AY4 AC125611.1-201ENST00000549563 229 ntBASIC0.47□□□□□ -2.33
TTC28Q96AY4 AP001429.1-201ENST00000602568 530 ntBASIC0.47□□□□□ -2.33
TTC28Q96AY4 AC004987.4-201ENST00000603383 338 ntBASIC0.47□□□□□ -2.33
TTC28Q96AY4 U4atac.1-201ENST00000618345 95 ntBASIC0.47□□□□□ -2.33
TTC28Q96AY4 AL603758.1-201ENST00000618654 241 ntBASIC0.47□□□□□ -2.33
TTC28Q96AY4 AC138627.2-201ENST00000624202 601 ntBASIC0.47□□□□□ -2.33
TTC28Q96AY4 RNU6-1097P-201ENST00000363586 107 ntBASIC0.47□□□□□ -2.33
TTC28Q96AY4 RNU6-754P-201ENST00000391166 107 ntBASIC0.47□□□□□ -2.33
TTC28Q96AY4 AL449283.1-202ENST00000418249 604 ntBASIC0.47□□□□□ -2.33
TTC28Q96AY4 AC244453.4-201ENST00000419150 388 ntBASIC0.47□□□□□ -2.33
TTC28Q96AY4 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC0.47□□□□□ -2.33
TTC28Q96AY4 MTCO3P1-205ENST00000422088 832 ntBASIC0.47□□□□□ -2.33
TTC28Q96AY4 AC246680.2-201ENST00000422106 389 ntBASIC0.47□□□□□ -2.33
TTC28Q96AY4 USP9YP24-201ENST00000434374 697 ntBASIC0.47□□□□□ -2.33
TTC28Q96AY4 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.47□□□□□ -2.33
TTC28Q96AY4 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC0.47□□□□□ -2.33
TTC28Q96AY4 NRON-201ENST00000517270 370 ntBASIC0.47□□□□□ -2.33
TTC28Q96AY4 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC0.47□□□□□ -2.33
TTC28Q96AY4 CYCSP27-201ENST00000527643 293 ntBASIC0.47□□□□□ -2.33
TTC28Q96AY4 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.47□□□□□ -2.33
TTC28Q96AY4 CYB5AP5-201ENST00000549779 389 ntBASIC0.47□□□□□ -2.33
TTC28Q96AY4 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC0.47□□□□□ -2.33
TTC28Q96AY4 AC008751.2-201ENST00000597885 980 ntBASIC0.47□□□□□ -2.33
TTC28Q96AY4 AL109620.1-201ENST00000618738 1197 ntBASIC0.47□□□□□ -2.33
TTC28Q96AY4 AC007792.1-201ENST00000623023 402 ntBASIC0.47□□□□□ -2.33
TTC28Q96AY4 AC080188.3-201ENST00000624842 748 ntBASIC0.47□□□□□ -2.33
TTC28Q96AY4 AC010615.1-201ENST00000594254 1764 ntBASIC0.47□□□□□ -2.33
TTC28Q96AY4 HMGN2P39-201ENST00000398005 273 ntBASIC0.46□□□□□ -2.34
TTC28Q96AY4 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC0.46□□□□□ -2.34
TTC28Q96AY4 EIF1P1-201ENST00000421436 341 ntBASIC0.46□□□□□ -2.34
TTC28Q96AY4 MTCYBP32-201ENST00000427945 1084 ntBASIC0.46□□□□□ -2.34
TTC28Q96AY4 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.46□□□□□ -2.34
TTC28Q96AY4 RPS25P9-201ENST00000435591 252 ntBASIC0.46□□□□□ -2.34
TTC28Q96AY4 MTCO2P20-201ENST00000437339 673 ntBASIC0.46□□□□□ -2.34
TTC28Q96AY4 MTND2P24-201ENST00000453434 806 ntBASIC0.46□□□□□ -2.34
TTC28Q96AY4 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC0.46□□□□□ -2.34
TTC28Q96AY4 AC109927.2-201ENST00000506416 303 ntBASIC0.46□□□□□ -2.34
TTC28Q96AY4 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC0.46□□□□□ -2.34
TTC28Q96AY4 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.46□□□□□ -2.34
TTC28Q96AY4 TPT1P8-201ENST00000510120 555 ntBASIC0.46□□□□□ -2.34
TTC28Q96AY4 OR8K2P-201ENST00000524645 927 ntBASIC0.46□□□□□ -2.34
TTC28Q96AY4 NACAP3-201ENST00000552100 481 ntBASIC0.46□□□□□ -2.34
TTC28Q96AY4 AC005668.1-201ENST00000571142 476 ntBASIC0.46□□□□□ -2.34
TTC28Q96AY4 AC090079.2-201ENST00000575289 768 ntBASIC0.46□□□□□ -2.34
TTC28Q96AY4 AC091912.2-201ENST00000624798 167 ntBASIC0.46□□□□□ -2.34
TTC28Q96AY4 RNU6-1079P-201ENST00000362861 110 ntBASIC0.46□□□□□ -2.34
TTC28Q96AY4 MRPL35P1-201ENST00000404272 572 ntBASIC0.46□□□□□ -2.34
TTC28Q96AY4 AC138623.1-201ENST00000418060 216 ntBASIC0.46□□□□□ -2.34
TTC28Q96AY4 ELOCP14-201ENST00000428070 331 ntBASIC0.46□□□□□ -2.34
TTC28Q96AY4 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.46□□□□□ -2.34
TTC28Q96AY4 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC0.46□□□□□ -2.34
TTC28Q96AY4 ELOCP7-201ENST00000439968 331 ntBASIC0.46□□□□□ -2.34
TTC28Q96AY4 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.46□□□□□ -2.34
TTC28Q96AY4 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.46□□□□□ -2.34
TTC28Q96AY4 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
TTC28Q96AY4 UBL5P1-201ENST00000507979 193 ntBASIC0.46□□□□□ -2.34
TTC28Q96AY4 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.46□□□□□ -2.34
TTC28Q96AY4 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC0.46□□□□□ -2.34
TTC28Q96AY4 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.46□□□□□ -2.34
TTC28Q96AY4 AC138915.2-201ENST00000569776 97 ntBASIC0.46□□□□□ -2.34
TTC28Q96AY4 AC026271.5-201ENST00000577873 130 ntBASIC0.46□□□□□ -2.34
TTC28Q96AY4 MTCYBP22-201ENST00000603788 447 ntBASIC0.46□□□□□ -2.34
TTC28Q96AY4 AC024581.2-201ENST00000619986 252 ntBASIC0.46□□□□□ -2.34
TTC28Q96AY4 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.46□□□□□ -2.34
TTC28Q96AY4 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.46□□□□□ -2.34
TTC28Q96AY4 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.45□□□□□ -2.34
TTC28Q96AY4 ZNF29P-201ENST00000225587 168 ntBASIC0.45□□□□□ -2.34
TTC28Q96AY4 SNORD115-3-201ENST00000363100 82 ntBASIC0.45□□□□□ -2.34
TTC28Q96AY4 RNU6-657P-201ENST00000383904 107 ntBASIC0.45□□□□□ -2.34
TTC28Q96AY4 MIR32-201ENST00000384965 70 ntBASIC0.45□□□□□ -2.34
TTC28Q96AY4 BTF3P8-201ENST00000414577 526 ntBASIC0.45□□□□□ -2.34
TTC28Q96AY4 GPM6BP2-201ENST00000432046 144 ntBASIC0.45□□□□□ -2.34
TTC28Q96AY4 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC0.45□□□□□ -2.34
TTC28Q96AY4 GPM6BP1-201ENST00000446387 144 ntBASIC0.45□□□□□ -2.34
TTC28Q96AY4 AC016717.1-201ENST00000448918 286 ntBASIC0.45□□□□□ -2.34
TTC28Q96AY4 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC0.45□□□□□ -2.34
TTC28Q96AY4 SCARNA21.1-201ENST00000515996 128 ntBASIC0.45□□□□□ -2.34
TTC28Q96AY4 RNA5SP165-201ENST00000517142 115 ntBASIC0.45□□□□□ -2.34
TTC28Q96AY4 VBP1-203ENST00000535916 944 ntTSL 2 BASIC0.45□□□□□ -2.34
TTC28Q96AY4 AC079598.5-201ENST00000547460 117 ntBASIC0.45□□□□□ -2.34
TTC28Q96AY4 AC233702.2-202ENST00000562547 291 ntBASIC0.45□□□□□ -2.34
TTC28Q96AY4 MIR4493-201ENST00000584016 73 ntBASIC0.45□□□□□ -2.34
TTC28Q96AY4 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC0.45□□□□□ -2.34
TTC28Q96AY4 AC008759.3-201ENST00000613300 508 ntBASIC0.45□□□□□ -2.34
TTC28Q96AY4 AP003485.1-201ENST00000625093 753 ntBASIC0.45□□□□□ -2.34
TTC28Q96AY4 MIR198-201ENST00000637333 62 ntBASIC0.45□□□□□ -2.34
TTC28Q96AY4 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.45□□□□□ -2.34
TTC28Q96AY4 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.45□□□□□ -2.34
TTC28Q96AY4 SNORD3E-201ENST00000362899 217 ntBASIC0.45□□□□□ -2.34
TTC28Q96AY4 SNORA25B-201ENST00000365507 128 ntBASIC0.45□□□□□ -2.34
TTC28Q96AY4 RNU6-46P-201ENST00000383860 107 ntBASIC0.45□□□□□ -2.34
TTC28Q96AY4 MIR515-2-201ENST00000384883 83 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms