Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 RNA5SP354-201ENST00000391247 136 ntBASIC2.72□□□□□ -1.97
SLC44A1Q8WWI5 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SLC44A1Q8WWI5 AL096701.2-201ENST00000416920 238 ntBASIC2.72□□□□□ -1.97
SLC44A1Q8WWI5 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.72□□□□□ -1.97
SLC44A1Q8WWI5 TOMM20P4-201ENST00000427861 435 ntBASIC2.72□□□□□ -1.97
SLC44A1Q8WWI5 AC022018.1-201ENST00000430685 241 ntBASIC2.72□□□□□ -1.97
SLC44A1Q8WWI5 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.72□□□□□ -1.97
SLC44A1Q8WWI5 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.72□□□□□ -1.97
SLC44A1Q8WWI5 AC233279.1-201ENST00000455300 423 ntBASIC2.72□□□□□ -1.97
SLC44A1Q8WWI5 RPS27P26-201ENST00000494583 239 ntBASIC2.72□□□□□ -1.97
SLC44A1Q8WWI5 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.72□□□□□ -1.97
SLC44A1Q8WWI5 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.72□□□□□ -1.97
SLC44A1Q8WWI5 SNORD19.2-201ENST00000516978 73 ntBASIC2.72□□□□□ -1.97
SLC44A1Q8WWI5 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.72□□□□□ -1.97
SLC44A1Q8WWI5 AC087854.1-201ENST00000519706 414 ntBASIC2.72□□□□□ -1.97
SLC44A1Q8WWI5 AP000763.2-201ENST00000540641 163 ntBASIC2.72□□□□□ -1.97
SLC44A1Q8WWI5 RPL12P50-201ENST00000603116 116 ntBASIC2.72□□□□□ -1.97
SLC44A1Q8WWI5 APOOP1-201ENST00000604695 592 ntBASIC2.72□□□□□ -1.97
SLC44A1Q8WWI5 AL121757.2-201ENST00000611223 313 ntBASIC2.72□□□□□ -1.97
SLC44A1Q8WWI5 FAM157A-202ENST00000615155 405 ntBASIC2.72□□□□□ -1.97
SLC44A1Q8WWI5 AC009248.2-201ENST00000619826 254 ntBASIC2.72□□□□□ -1.97
SLC44A1Q8WWI5 AC092794.2-201ENST00000620933 563 ntBASIC2.72□□□□□ -1.97
SLC44A1Q8WWI5 AL008636.1-201ENST00000625038 1018 ntBASIC2.72□□□□□ -1.97
SLC44A1Q8WWI5 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.72□□□□□ -1.97
SLC44A1Q8WWI5 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SLC44A1Q8WWI5 SNORA80A-201ENST00000363922 136 ntBASIC2.71□□□□□ -1.98
SLC44A1Q8WWI5 Y_RNA.212-201ENST00000364177 102 ntBASIC2.71□□□□□ -1.98
SLC44A1Q8WWI5 RNU6-128P-201ENST00000383976 107 ntBASIC2.71□□□□□ -1.98
SLC44A1Q8WWI5 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.71□□□□□ -1.98
SLC44A1Q8WWI5 AC009414.1-201ENST00000427200 443 ntBASIC2.71□□□□□ -1.98
SLC44A1Q8WWI5 IFNA20P-201ENST00000436840 528 ntBASIC2.71□□□□□ -1.98
SLC44A1Q8WWI5 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.71□□□□□ -1.98
SLC44A1Q8WWI5 AC025750.2-201ENST00000442609 450 ntBASIC2.71□□□□□ -1.98
SLC44A1Q8WWI5 RPL7P12-201ENST00000446719 750 ntBASIC2.71□□□□□ -1.98
SLC44A1Q8WWI5 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.71□□□□□ -1.98
SLC44A1Q8WWI5 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.71□□□□□ -1.98
SLC44A1Q8WWI5 AC008571.1-201ENST00000467232 300 ntBASIC2.71□□□□□ -1.98
SLC44A1Q8WWI5 RPS29P26-201ENST00000477483 171 ntBASIC2.71□□□□□ -1.98
SLC44A1Q8WWI5 AC096576.1-201ENST00000489014 359 ntBASIC2.71□□□□□ -1.98
SLC44A1Q8WWI5 SEM1P1-201ENST00000506694 209 ntBASIC2.71□□□□□ -1.98
SLC44A1Q8WWI5 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.71□□□□□ -1.98
SLC44A1Q8WWI5 TBCAP3-201ENST00000512475 312 ntBASIC2.71□□□□□ -1.98
SLC44A1Q8WWI5 RNU6-864P-201ENST00000516256 108 ntBASIC2.71□□□□□ -1.98
SLC44A1Q8WWI5 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.71□□□□□ -1.98
SLC44A1Q8WWI5 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.71□□□□□ -1.98
SLC44A1Q8WWI5 AC107953.1-201ENST00000522216 297 ntBASIC2.71□□□□□ -1.98
SLC44A1Q8WWI5 AP004607.1-201ENST00000524456 203 ntBASIC2.71□□□□□ -1.98
SLC44A1Q8WWI5 COPS8P3-201ENST00000526024 482 ntBASIC2.71□□□□□ -1.98
SLC44A1Q8WWI5 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.71□□□□□ -1.98
SLC44A1Q8WWI5 AC004486.1-201ENST00000546846 233 ntBASIC2.71□□□□□ -1.98
SLC44A1Q8WWI5 AC006199.1-201ENST00000548728 219 ntBASIC2.71□□□□□ -1.98
SLC44A1Q8WWI5 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.71□□□□□ -1.98
SLC44A1Q8WWI5 MIR3670-2-201ENST00000582974 65 ntBASIC2.71□□□□□ -1.98
SLC44A1Q8WWI5 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.71□□□□□ -1.98
SLC44A1Q8WWI5 MIR3670-1-201ENST00000584160 65 ntBASIC2.71□□□□□ -1.98
SLC44A1Q8WWI5 MIR3670-3-201ENST00000584855 65 ntBASIC2.71□□□□□ -1.98
SLC44A1Q8WWI5 AL033523.1-201ENST00000605153 153 ntBASIC2.71□□□□□ -1.98
SLC44A1Q8WWI5 AL022345.1-201ENST00000607292 135 ntBASIC2.71□□□□□ -1.98
SLC44A1Q8WWI5 MIR3670-4-201ENST00000612260 65 ntBASIC2.71□□□□□ -1.98
SLC44A1Q8WWI5 AC093913.1-201ENST00000614178 329 ntBASIC2.71□□□□□ -1.98
SLC44A1Q8WWI5 FO624990.1-201ENST00000636373 85 ntBASIC2.71□□□□□ -1.98
SLC44A1Q8WWI5 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.71□□□□□ -1.98
SLC44A1Q8WWI5 AC138915.1-201ENST00000565427 1685 ntBASIC2.71□□□□□ -1.98
SLC44A1Q8WWI5 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SLC44A1Q8WWI5 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.71□□□□□ -1.98
SLC44A1Q8WWI5 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
SLC44A1Q8WWI5 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.71□□□□□ -1.98
SLC44A1Q8WWI5 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.7□□□□□ -1.98
SLC44A1Q8WWI5 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SLC44A1Q8WWI5 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.7□□□□□ -1.98
SLC44A1Q8WWI5 CBX3P1-201ENST00000325243 554 ntBASIC2.7□□□□□ -1.98
SLC44A1Q8WWI5 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.7□□□□□ -1.98
SLC44A1Q8WWI5 RNU6-845P-201ENST00000362578 103 ntBASIC2.7□□□□□ -1.98
SLC44A1Q8WWI5 RNU1-105P-201ENST00000363470 161 ntBASIC2.7□□□□□ -1.98
SLC44A1Q8WWI5 SNORA25.6-201ENST00000364121 118 ntBASIC2.7□□□□□ -1.98
SLC44A1Q8WWI5 RNU1-100P-201ENST00000365255 165 ntBASIC2.7□□□□□ -1.98
SLC44A1Q8WWI5 RNU6-831P-201ENST00000384548 107 ntBASIC2.7□□□□□ -1.98
SLC44A1Q8WWI5 MIR767-201ENST00000390228 109 ntBASIC2.7□□□□□ -1.98
SLC44A1Q8WWI5 RN7SKP32-201ENST00000410167 303 ntBASIC2.7□□□□□ -1.98
SLC44A1Q8WWI5 AC096649.2-201ENST00000416186 393 ntBASIC2.7□□□□□ -1.98
SLC44A1Q8WWI5 AC016831.2-201ENST00000417179 352 ntBASIC2.7□□□□□ -1.98
SLC44A1Q8WWI5 PGBD4P6-201ENST00000421501 610 ntBASIC2.7□□□□□ -1.98
SLC44A1Q8WWI5 RPL7P37-201ENST00000425095 738 ntBASIC2.7□□□□□ -1.98
SLC44A1Q8WWI5 HIGD1AP2-201ENST00000446367 280 ntBASIC2.7□□□□□ -1.98
SLC44A1Q8WWI5 MTND5P20-201ENST00000448677 143 ntBASIC2.7□□□□□ -1.98
SLC44A1Q8WWI5 AP000705.1-201ENST00000454567 350 ntBASIC2.7□□□□□ -1.98
SLC44A1Q8WWI5 RNU6-329P-201ENST00000459618 107 ntBASIC2.7□□□□□ -1.98
SLC44A1Q8WWI5 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SLC44A1Q8WWI5 Y_RNA.687-201ENST00000516558 91 ntBASIC2.7□□□□□ -1.98
SLC44A1Q8WWI5 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SLC44A1Q8WWI5 AP000889.2-201ENST00000532684 490 ntBASIC2.7□□□□□ -1.98
SLC44A1Q8WWI5 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SLC44A1Q8WWI5 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.7□□□□□ -1.98
SLC44A1Q8WWI5 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.7□□□□□ -1.98
SLC44A1Q8WWI5 AC025281.1-201ENST00000567026 265 ntBASIC2.7□□□□□ -1.98
SLC44A1Q8WWI5 AC093732.2-201ENST00000607950 274 ntBASIC2.7□□□□□ -1.98
SLC44A1Q8WWI5 RMST_7.1-201ENST00000621935 268 ntBASIC2.7□□□□□ -1.98
SLC44A1Q8WWI5 SCARNA15.3-201ENST00000626315 122 ntBASIC2.7□□□□□ -1.98
SLC44A1Q8WWI5 SCARNA4.1-201ENST00000628597 123 ntBASIC2.7□□□□□ -1.98
SLC44A1Q8WWI5 AC099654.7-201ENST00000635788 2127 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms