Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 Y_RNA.682-201ENST00000516457 100 ntBASIC3.06□□□□□ -1.92
HMGB4Q8WW32 RNA5SP367-201ENST00000516557 118 ntBASIC3.06□□□□□ -1.92
HMGB4Q8WW32 Y_RNA.691-201ENST00000516611 103 ntBASIC3.06□□□□□ -1.92
HMGB4Q8WW32 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.06□□□□□ -1.92
HMGB4Q8WW32 AC104576.1-201ENST00000524225 88 ntBASIC3.06□□□□□ -1.92
HMGB4Q8WW32 AP005639.2-201ENST00000527592 928 ntBASIC3.06□□□□□ -1.92
HMGB4Q8WW32 AL391813.1-201ENST00000603098 260 ntBASIC3.06□□□□□ -1.92
HMGB4Q8WW32 AL121917.1-203ENST00000605534 577 ntBASIC3.06□□□□□ -1.92
HMGB4Q8WW32 Y_RNA.804-201ENST00000615262 101 ntBASIC3.06□□□□□ -1.92
HMGB4Q8WW32 AL079305.1-201ENST00000623159 3008 ntBASIC3.06□□□□□ -1.92
HMGB4Q8WW32 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
HMGB4Q8WW32 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
HMGB4Q8WW32 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HMGB4Q8WW32 MIR449A-201ENST00000362113 91 ntBASIC3.05□□□□□ -1.92
HMGB4Q8WW32 Y_RNA.263-201ENST00000364659 114 ntBASIC3.05□□□□□ -1.92
HMGB4Q8WW32 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HMGB4Q8WW32 RNU6-95P-201ENST00000384697 107 ntBASIC3.05□□□□□ -1.92
HMGB4Q8WW32 RNU6-19P-201ENST00000384718 107 ntBASIC3.05□□□□□ -1.92
HMGB4Q8WW32 AL360182.1-201ENST00000397433 468 ntBASIC3.05□□□□□ -1.92
HMGB4Q8WW32 AL590632.1-201ENST00000424289 371 ntBASIC3.05□□□□□ -1.92
HMGB4Q8WW32 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.05□□□□□ -1.92
HMGB4Q8WW32 SNAP23P1-201ENST00000433229 246 ntBASIC3.05□□□□□ -1.92
HMGB4Q8WW32 SNRPEP8-201ENST00000442866 260 ntBASIC3.05□□□□□ -1.92
HMGB4Q8WW32 AL135938.1-201ENST00000443141 297 ntBASIC3.05□□□□□ -1.92
HMGB4Q8WW32 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.05□□□□□ -1.92
HMGB4Q8WW32 MTND1P17-201ENST00000448961 204 ntBASIC3.05□□□□□ -1.92
HMGB4Q8WW32 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.05□□□□□ -1.92
HMGB4Q8WW32 MTCO1P29-201ENST00000496868 288 ntBASIC3.05□□□□□ -1.92
HMGB4Q8WW32 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.05□□□□□ -1.92
HMGB4Q8WW32 AC096745.1-201ENST00000509945 370 ntBASIC3.05□□□□□ -1.92
HMGB4Q8WW32 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.05□□□□□ -1.92
HMGB4Q8WW32 AC009163.5-201ENST00000575421 637 ntBASIC3.05□□□□□ -1.92
HMGB4Q8WW32 AL355877.2-201ENST00000603670 358 ntBASIC3.05□□□□□ -1.92
HMGB4Q8WW32 AC092628.2-201ENST00000622492 339 ntBASIC3.05□□□□□ -1.92
HMGB4Q8WW32 AC007496.3-201ENST00000624987 3443 ntBASIC3.05□□□□□ -1.92
HMGB4Q8WW32 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.04□□□□□ -1.92
HMGB4Q8WW32 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HMGB4Q8WW32 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.04□□□□□ -1.92
HMGB4Q8WW32 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HMGB4Q8WW32 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.04□□□□□ -1.92
HMGB4Q8WW32 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HMGB4Q8WW32 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HMGB4Q8WW32 RNU1-75P-201ENST00000347264 129 ntBASIC3.04□□□□□ -1.92
HMGB4Q8WW32 RNU6-858P-201ENST00000362436 107 ntBASIC3.04□□□□□ -1.92
HMGB4Q8WW32 RNU6-428P-201ENST00000362942 107 ntBASIC3.04□□□□□ -1.92
HMGB4Q8WW32 Y_RNA.339-201ENST00000365325 102 ntBASIC3.04□□□□□ -1.92
HMGB4Q8WW32 SNORD116-20-201ENST00000384529 92 ntBASIC3.04□□□□□ -1.92
HMGB4Q8WW32 SNORA48.8-201ENST00000391324 134 ntBASIC3.04□□□□□ -1.92
HMGB4Q8WW32 MIR548K-201ENST00000408406 116 ntBASIC3.04□□□□□ -1.92
HMGB4Q8WW32 RNU2-41P-201ENST00000410991 178 ntBASIC3.04□□□□□ -1.92
HMGB4Q8WW32 AL645568.3-201ENST00000433683 316 ntBASIC3.04□□□□□ -1.92
HMGB4Q8WW32 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.04□□□□□ -1.92
HMGB4Q8WW32 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.04□□□□□ -1.92
HMGB4Q8WW32 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.04□□□□□ -1.92
HMGB4Q8WW32 MTND1P11-201ENST00000456661 876 ntBASIC3.04□□□□□ -1.92
HMGB4Q8WW32 AC130509.1-201ENST00000464158 433 ntBASIC3.04□□□□□ -1.92
HMGB4Q8WW32 MED28P2-201ENST00000475771 317 ntBASIC3.04□□□□□ -1.92
HMGB4Q8WW32 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.04□□□□□ -1.92
HMGB4Q8WW32 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.04□□□□□ -1.92
HMGB4Q8WW32 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.04□□□□□ -1.92
HMGB4Q8WW32 AC105029.1-201ENST00000520250 669 ntBASIC3.04□□□□□ -1.92
HMGB4Q8WW32 AC103996.1-201ENST00000555468 102 ntBASIC3.04□□□□□ -1.92
HMGB4Q8WW32 MIR4790-201ENST00000577799 79 ntBASIC3.04□□□□□ -1.92
HMGB4Q8WW32 ELOCP29-201ENST00000588193 334 ntBASIC3.04□□□□□ -1.92
HMGB4Q8WW32 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.04□□□□□ -1.92
HMGB4Q8WW32 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.04□□□□□ -1.92
HMGB4Q8WW32 AC104237.2-201ENST00000612456 443 ntBASIC3.04□□□□□ -1.92
HMGB4Q8WW32 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
HMGB4Q8WW32 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HMGB4Q8WW32 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
HMGB4Q8WW32 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.04□□□□□ -1.92
HMGB4Q8WW32 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.04□□□□□ -1.92
HMGB4Q8WW32 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HMGB4Q8WW32 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.03□□□□□ -1.92
HMGB4Q8WW32 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HMGB4Q8WW32 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
HMGB4Q8WW32 MAPK10-266ENST00000641066 6555 ntBASIC3.03□□□□□ -1.92
HMGB4Q8WW32 RNU6-105P-201ENST00000363909 104 ntBASIC3.03□□□□□ -1.92
HMGB4Q8WW32 RNU6-336P-201ENST00000364891 107 ntBASIC3.03□□□□□ -1.92
HMGB4Q8WW32 RNU6-748P-201ENST00000384648 107 ntBASIC3.03□□□□□ -1.92
HMGB4Q8WW32 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.03□□□□□ -1.92
HMGB4Q8WW32 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.03□□□□□ -1.92
HMGB4Q8WW32 NCOR1P3-201ENST00000420479 303 ntBASIC3.03□□□□□ -1.92
HMGB4Q8WW32 AL139396.1-201ENST00000421137 167 ntBASIC3.03□□□□□ -1.92
HMGB4Q8WW32 AC093019.1-201ENST00000443135 252 ntBASIC3.03□□□□□ -1.92
HMGB4Q8WW32 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.03□□□□□ -1.92
HMGB4Q8WW32 RNU6-1037P-201ENST00000459571 107 ntBASIC3.03□□□□□ -1.92
HMGB4Q8WW32 AC117440.1-201ENST00000474107 571 ntBASIC3.03□□□□□ -1.92
HMGB4Q8WW32 AC021205.2-201ENST00000480069 347 ntBASIC3.03□□□□□ -1.92
HMGB4Q8WW32 AC083906.5-201ENST00000503722 328 ntBASIC3.03□□□□□ -1.92
HMGB4Q8WW32 MTND5P5-201ENST00000503764 376 ntBASIC3.03□□□□□ -1.92
HMGB4Q8WW32 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.03□□□□□ -1.92
HMGB4Q8WW32 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.03□□□□□ -1.92
HMGB4Q8WW32 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.03□□□□□ -1.92
HMGB4Q8WW32 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.03□□□□□ -1.92
HMGB4Q8WW32 AC243960.4-201ENST00000600532 288 ntBASIC3.03□□□□□ -1.92
HMGB4Q8WW32 AL133393.1-201ENST00000603277 287 ntBASIC3.03□□□□□ -1.92
HMGB4Q8WW32 AC005046.1-201ENST00000608515 625 ntBASIC3.03□□□□□ -1.92
HMGB4Q8WW32 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.03□□□□□ -1.92
HMGB4Q8WW32 UCA1.1-201ENST00000620952 75 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms