Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 RNU4-1-201ENST00000363925 141 ntBASIC1.32□□□□□ -2.2
LMX1AQ8TE12 Y_RNA.796-201ENST00000364268 102 ntBASIC1.32□□□□□ -2.2
LMX1AQ8TE12 Y_RNA.799-201ENST00000364992 102 ntBASIC1.32□□□□□ -2.2
LMX1AQ8TE12 RNU6-203P-201ENST00000384038 104 ntBASIC1.32□□□□□ -2.2
LMX1AQ8TE12 RNU6-925P-201ENST00000384629 104 ntBASIC1.32□□□□□ -2.2
LMX1AQ8TE12 FTH1P15-201ENST00000406984 280 ntBASIC1.32□□□□□ -2.2
LMX1AQ8TE12 RNU6-1025P-201ENST00000410629 104 ntBASIC1.32□□□□□ -2.2
LMX1AQ8TE12 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.32□□□□□ -2.2
LMX1AQ8TE12 RPS6P15-201ENST00000431996 751 ntBASIC1.32□□□□□ -2.2
LMX1AQ8TE12 AL591212.2-201ENST00000433923 257 ntBASIC1.32□□□□□ -2.2
LMX1AQ8TE12 AL008629.1-201ENST00000438615 184 ntBASIC1.32□□□□□ -2.2
LMX1AQ8TE12 ZNF736P1Y-201ENST00000440402 1276 ntBASIC1.32□□□□□ -2.2
LMX1AQ8TE12 AC244505.5-201ENST00000443639 207 ntBASIC1.32□□□□□ -2.2
LMX1AQ8TE12 Z73417.1-201ENST00000447373 778 ntBASIC1.32□□□□□ -2.2
LMX1AQ8TE12 KATNBL1P6-201ENST00000453433 915 ntBASIC1.32□□□□□ -2.2
LMX1AQ8TE12 BTF3P15-201ENST00000455606 336 ntBASIC1.32□□□□□ -2.2
LMX1AQ8TE12 AL139824.2-201ENST00000458731 1095 ntBASIC1.32□□□□□ -2.2
LMX1AQ8TE12 AC112771.1-201ENST00000463581 102 ntBASIC1.32□□□□□ -2.2
LMX1AQ8TE12 AC034244.1-201ENST00000507687 207 ntBASIC1.32□□□□□ -2.2
LMX1AQ8TE12 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.32□□□□□ -2.2
LMX1AQ8TE12 RNU6-677P-201ENST00000516914 101 ntBASIC1.32□□□□□ -2.2
LMX1AQ8TE12 AC109329.1-201ENST00000518744 317 ntBASIC1.32□□□□□ -2.2
LMX1AQ8TE12 MTND2P7-201ENST00000521337 640 ntBASIC1.32□□□□□ -2.2
LMX1AQ8TE12 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.32□□□□□ -2.2
LMX1AQ8TE12 AC022880.1-201ENST00000534017 973 ntBASIC1.32□□□□□ -2.2
LMX1AQ8TE12 AC091489.2-201ENST00000566263 604 ntBASIC1.32□□□□□ -2.2
LMX1AQ8TE12 AC022254.1-201ENST00000567857 235 ntBASIC1.32□□□□□ -2.2
LMX1AQ8TE12 AP001981.2-201ENST00000603241 418 ntBASIC1.32□□□□□ -2.2
LMX1AQ8TE12 MIR15A-201ENST00000607334 83 ntBASIC1.32□□□□□ -2.2
LMX1AQ8TE12 AL355816.2-201ENST00000610049 647 ntBASIC1.32□□□□□ -2.2
LMX1AQ8TE12 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC1.32□□□□□ -2.2
LMX1AQ8TE12 AC104010.1-201ENST00000616889 150 ntBASIC1.32□□□□□ -2.2
LMX1AQ8TE12 AC008121.3-201ENST00000618726 433 ntBASIC1.32□□□□□ -2.2
LMX1AQ8TE12 AL607023.1-201ENST00000620045 248 ntBASIC1.32□□□□□ -2.2
LMX1AQ8TE12 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.32□□□□□ -2.2
LMX1AQ8TE12 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
LMX1AQ8TE12 AC138393.1-203ENST00000327086 343 ntBASIC1.31□□□□□ -2.2
LMX1AQ8TE12 Y_RNA.33-201ENST00000362591 102 ntBASIC1.31□□□□□ -2.2
LMX1AQ8TE12 RNU4-42P-201ENST00000364738 142 ntBASIC1.31□□□□□ -2.2
LMX1AQ8TE12 Y_RNA.355-201ENST00000365462 98 ntBASIC1.31□□□□□ -2.2
LMX1AQ8TE12 RNU6-395P-201ENST00000365662 106 ntBASIC1.31□□□□□ -2.2
LMX1AQ8TE12 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
LMX1AQ8TE12 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
LMX1AQ8TE12 MIR1276-201ENST00000408707 83 ntBASIC1.31□□□□□ -2.2
LMX1AQ8TE12 AC092809.3-201ENST00000415453 231 ntBASIC1.31□□□□□ -2.2
LMX1AQ8TE12 AL008987.1-201ENST00000415528 237 ntBASIC1.31□□□□□ -2.2
LMX1AQ8TE12 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.31□□□□□ -2.2
LMX1AQ8TE12 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.31□□□□□ -2.2
LMX1AQ8TE12 AC007098.1-201ENST00000420122 367 ntBASIC1.31□□□□□ -2.2
LMX1AQ8TE12 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.31□□□□□ -2.2
LMX1AQ8TE12 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.31□□□□□ -2.2
LMX1AQ8TE12 RPS27AP14-201ENST00000422868 454 ntBASIC1.31□□□□□ -2.2
LMX1AQ8TE12 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.31□□□□□ -2.2
LMX1AQ8TE12 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.31□□□□□ -2.2
LMX1AQ8TE12 NDUFB1P2-201ENST00000449477 176 ntBASIC1.31□□□□□ -2.2
LMX1AQ8TE12 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.31□□□□□ -2.2
LMX1AQ8TE12 RNU1-123P-201ENST00000458950 160 ntBASIC1.31□□□□□ -2.2
LMX1AQ8TE12 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC1.31□□□□□ -2.2
LMX1AQ8TE12 AC027575.1-201ENST00000481064 460 ntBASIC1.31□□□□□ -2.2
LMX1AQ8TE12 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.31□□□□□ -2.2
LMX1AQ8TE12 SNORA4.4-201ENST00000515921 135 ntBASIC1.31□□□□□ -2.2
LMX1AQ8TE12 RNU6-311P-201ENST00000516224 102 ntBASIC1.31□□□□□ -2.2
LMX1AQ8TE12 RNA5SP490-201ENST00000517141 136 ntBASIC1.31□□□□□ -2.2
LMX1AQ8TE12 AC022616.6-201ENST00000520479 119 ntBASIC1.31□□□□□ -2.2
LMX1AQ8TE12 CR383656.8-201ENST00000549046 145 ntBASIC1.31□□□□□ -2.2
LMX1AQ8TE12 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.31□□□□□ -2.2
LMX1AQ8TE12 PSMA3P-201ENST00000555485 635 ntBASIC1.31□□□□□ -2.2
LMX1AQ8TE12 AL354943.1-201ENST00000572103 781 ntBASIC1.31□□□□□ -2.2
LMX1AQ8TE12 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.31□□□□□ -2.2
LMX1AQ8TE12 SNRPGP17-201ENST00000603780 214 ntBASIC1.31□□□□□ -2.2
LMX1AQ8TE12 AP000811.1-201ENST00000603803 651 ntBASIC1.31□□□□□ -2.2
LMX1AQ8TE12 AC105148.1-201ENST00000604961 409 ntBASIC1.31□□□□□ -2.2
LMX1AQ8TE12 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.31□□□□□ -2.2
LMX1AQ8TE12 AC022202.1-201ENST00000613515 211 ntBASIC1.31□□□□□ -2.2
LMX1AQ8TE12 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC1.31□□□□□ -2.2
LMX1AQ8TE12 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.31□□□□□ -2.2
LMX1AQ8TE12 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.31□□□□□ -2.2
LMX1AQ8TE12 Y_RNA.18-201ENST00000362461 102 ntBASIC1.3□□□□□ -2.2
LMX1AQ8TE12 RNU6-1010P-201ENST00000362757 107 ntBASIC1.3□□□□□ -2.2
LMX1AQ8TE12 U8.3-201ENST00000363321 132 ntBASIC1.3□□□□□ -2.2
LMX1AQ8TE12 RNY4P16-201ENST00000364768 94 ntBASIC1.3□□□□□ -2.2
LMX1AQ8TE12 RNU6-487P-201ENST00000365430 104 ntBASIC1.3□□□□□ -2.2
LMX1AQ8TE12 RNU6-843P-201ENST00000384454 104 ntBASIC1.3□□□□□ -2.2
LMX1AQ8TE12 RNU6-584P-201ENST00000410350 95 ntBASIC1.3□□□□□ -2.2
LMX1AQ8TE12 VN1R36P-201ENST00000414936 291 ntBASIC1.3□□□□□ -2.2
LMX1AQ8TE12 AL031779.1-201ENST00000415663 330 ntBASIC1.3□□□□□ -2.2
LMX1AQ8TE12 EIF4EP2-201ENST00000422816 654 ntBASIC1.3□□□□□ -2.2
LMX1AQ8TE12 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.3□□□□□ -2.2
LMX1AQ8TE12 AC008267.5-201ENST00000424928 265 ntBASIC1.3□□□□□ -2.2
LMX1AQ8TE12 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.3□□□□□ -2.2
LMX1AQ8TE12 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.3□□□□□ -2.2
LMX1AQ8TE12 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.3□□□□□ -2.2
LMX1AQ8TE12 AL360221.1-201ENST00000445989 335 ntBASIC1.3□□□□□ -2.2
LMX1AQ8TE12 AC093899.1-201ENST00000457984 376 ntBASIC1.3□□□□□ -2.2
LMX1AQ8TE12 MTCYBP18-201ENST00000501056 747 ntBASIC1.3□□□□□ -2.2
LMX1AQ8TE12 SNORA25.11-201ENST00000515935 105 ntBASIC1.3□□□□□ -2.2
LMX1AQ8TE12 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.3□□□□□ -2.2
LMX1AQ8TE12 ZNF519P3-201ENST00000557158 1032 ntBASIC1.3□□□□□ -2.2
LMX1AQ8TE12 TMF1P1-201ENST00000576058 373 ntBASIC1.3□□□□□ -2.2
LMX1AQ8TE12 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms