Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.26□□□□□ -2.37
SPTSSBQ8NFR3 MIR340-201ENST00000362125 95 ntBASIC0.25□□□□□ -2.37
SPTSSBQ8NFR3 RNU6-1207P-201ENST00000384343 107 ntBASIC0.25□□□□□ -2.37
SPTSSBQ8NFR3 Y_RNA.510-201ENST00000384511 114 ntBASIC0.25□□□□□ -2.37
SPTSSBQ8NFR3 RAB28P5-201ENST00000427490 651 ntBASIC0.25□□□□□ -2.37
SPTSSBQ8NFR3 AL365400.1-201ENST00000431854 640 ntBASIC0.25□□□□□ -2.37
SPTSSBQ8NFR3 RPS15AP10-201ENST00000432472 382 ntBASIC0.25□□□□□ -2.37
SPTSSBQ8NFR3 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.25□□□□□ -2.37
SPTSSBQ8NFR3 RNFT1P2-201ENST00000443064 757 ntBASIC0.25□□□□□ -2.37
SPTSSBQ8NFR3 AC002350.1-201ENST00000490759 375 ntBASIC0.25□□□□□ -2.37
SPTSSBQ8NFR3 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.25□□□□□ -2.37
SPTSSBQ8NFR3 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC0.25□□□□□ -2.37
SPTSSBQ8NFR3 AC023538.1-201ENST00000534576 736 ntBASIC0.25□□□□□ -2.37
SPTSSBQ8NFR3 ZKSCAN7P1-201ENST00000543668 673 ntBASIC0.25□□□□□ -2.37
SPTSSBQ8NFR3 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC0.25□□□□□ -2.37
SPTSSBQ8NFR3 AC133485.1-201ENST00000567176 124 ntBASIC0.25□□□□□ -2.37
SPTSSBQ8NFR3 AC138907.6-201ENST00000568401 126 ntBASIC0.25□□□□□ -2.37
SPTSSBQ8NFR3 AC138915.2-201ENST00000569776 97 ntBASIC0.25□□□□□ -2.37
SPTSSBQ8NFR3 MIR4672-201ENST00000583126 81 ntBASIC0.25□□□□□ -2.37
SPTSSBQ8NFR3 VN1R107P-201ENST00000601784 209 ntBASIC0.25□□□□□ -2.37
SPTSSBQ8NFR3 AC078795.2-201ENST00000602835 1252 ntBASIC0.25□□□□□ -2.37
SPTSSBQ8NFR3 AL590229.1-201ENST00000603497 542 ntBASIC0.25□□□□□ -2.37
SPTSSBQ8NFR3 AC069114.2-201ENST00000604699 304 ntBASIC0.25□□□□□ -2.37
SPTSSBQ8NFR3 KATNBL1P5-201ENST00000605015 517 ntBASIC0.25□□□□□ -2.37
SPTSSBQ8NFR3 AL353765.1-201ENST00000605514 183 ntBASIC0.25□□□□□ -2.37
SPTSSBQ8NFR3 AL133216.2-202ENST00000634512 349 ntBASIC0.25□□□□□ -2.37
SPTSSBQ8NFR3 AC106858.1-201ENST00000637497 429 ntBASIC0.25□□□□□ -2.37
SPTSSBQ8NFR3 AC099063.3-201ENST00000642066 185 ntBASIC0.25□□□□□ -2.37
SPTSSBQ8NFR3 AL391987.6-201ENST00000305671 199 ntBASIC0.24□□□□□ -2.37
SPTSSBQ8NFR3 U8.10-201ENST00000384260 133 ntBASIC0.24□□□□□ -2.37
SPTSSBQ8NFR3 SNORA40C-201ENST00000391285 128 ntBASIC0.24□□□□□ -2.37
SPTSSBQ8NFR3 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
SPTSSBQ8NFR3 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
SPTSSBQ8NFR3 Y_RNA.597-201ENST00000410463 100 ntBASIC0.24□□□□□ -2.37
SPTSSBQ8NFR3 AC027644.1-201ENST00000419595 298 ntBASIC0.24□□□□□ -2.37
SPTSSBQ8NFR3 AC114737.2-201ENST00000421583 173 ntBASIC0.24□□□□□ -2.37
SPTSSBQ8NFR3 AC099677.2-201ENST00000436385 175 ntBASIC0.24□□□□□ -2.37
SPTSSBQ8NFR3 MTND4P6-201ENST00000438297 472 ntBASIC0.24□□□□□ -2.37
SPTSSBQ8NFR3 AL008629.1-201ENST00000438615 184 ntBASIC0.24□□□□□ -2.37
SPTSSBQ8NFR3 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.24□□□□□ -2.37
SPTSSBQ8NFR3 MTND5P8-201ENST00000449817 1083 ntBASIC0.24□□□□□ -2.37
SPTSSBQ8NFR3 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC0.24□□□□□ -2.37
SPTSSBQ8NFR3 RNU7-95P-201ENST00000459222 64 ntBASIC0.24□□□□□ -2.37
SPTSSBQ8NFR3 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.24□□□□□ -2.37
SPTSSBQ8NFR3 AC009646.1-201ENST00000510455 318 ntBASIC0.24□□□□□ -2.37
SPTSSBQ8NFR3 AC079140.3-201ENST00000511111 550 ntBASIC0.24□□□□□ -2.37
SPTSSBQ8NFR3 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.24□□□□□ -2.37
SPTSSBQ8NFR3 RNU6-113P-201ENST00000516653 101 ntBASIC0.24□□□□□ -2.37
SPTSSBQ8NFR3 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
SPTSSBQ8NFR3 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.24□□□□□ -2.37
SPTSSBQ8NFR3 AC092451.2-201ENST00000538746 658 ntBASIC0.24□□□□□ -2.37
SPTSSBQ8NFR3 AC091544.4-201ENST00000555268 342 ntBASIC0.24□□□□□ -2.37
SPTSSBQ8NFR3 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC0.24□□□□□ -2.37
SPTSSBQ8NFR3 AL391813.2-201ENST00000609113 322 ntBASIC0.24□□□□□ -2.37
SPTSSBQ8NFR3 AC120349.2-201ENST00000625002 298 ntBASIC0.24□□□□□ -2.37
SPTSSBQ8NFR3 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
SPTSSBQ8NFR3 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
SPTSSBQ8NFR3 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.23□□□□□ -2.37
SPTSSBQ8NFR3 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
SPTSSBQ8NFR3 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
SPTSSBQ8NFR3 MIR508-201ENST00000384857 115 ntBASIC0.23□□□□□ -2.37
SPTSSBQ8NFR3 RNU6-910P-201ENST00000390844 107 ntBASIC0.23□□□□□ -2.37
SPTSSBQ8NFR3 MTCO1P56-201ENST00000401674 224 ntBASIC0.23□□□□□ -2.37
SPTSSBQ8NFR3 AL359634.1-202ENST00000404721 284 ntBASIC0.23□□□□□ -2.37
SPTSSBQ8NFR3 AL357139.1-201ENST00000407792 426 ntBASIC0.23□□□□□ -2.37
SPTSSBQ8NFR3 CYCSP49-201ENST00000420810 319 ntBASIC0.23□□□□□ -2.37
SPTSSBQ8NFR3 MTCO3P18-201ENST00000440206 761 ntBASIC0.23□□□□□ -2.37
SPTSSBQ8NFR3 AL078601.1-201ENST00000444542 271 ntBASIC0.23□□□□□ -2.37
SPTSSBQ8NFR3 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.23□□□□□ -2.37
SPTSSBQ8NFR3 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.23□□□□□ -2.37
SPTSSBQ8NFR3 COX6CP14-201ENST00000469580 174 ntBASIC0.23□□□□□ -2.37
SPTSSBQ8NFR3 MTCO3P7-201ENST00000510008 774 ntBASIC0.23□□□□□ -2.37
SPTSSBQ8NFR3 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC0.23□□□□□ -2.37
SPTSSBQ8NFR3 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC0.23□□□□□ -2.37
SPTSSBQ8NFR3 SNORA31.4-201ENST00000516049 129 ntBASIC0.23□□□□□ -2.37
SPTSSBQ8NFR3 SNORA31.19-201ENST00000517079 126 ntBASIC0.23□□□□□ -2.37
SPTSSBQ8NFR3 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.23□□□□□ -2.37
SPTSSBQ8NFR3 AC104417.1-201ENST00000523974 751 ntBASIC0.23□□□□□ -2.37
SPTSSBQ8NFR3 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC0.23□□□□□ -2.37
SPTSSBQ8NFR3 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC0.23□□□□□ -2.37
SPTSSBQ8NFR3 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.23□□□□□ -2.37
SPTSSBQ8NFR3 ZNF971P-201ENST00000562068 1249 ntBASIC0.23□□□□□ -2.37
SPTSSBQ8NFR3 AC091489.2-201ENST00000566263 604 ntBASIC0.23□□□□□ -2.37
SPTSSBQ8NFR3 AP000654.2-201ENST00000605633 586 ntBASIC0.23□□□□□ -2.37
SPTSSBQ8NFR3 AC025754.2-201ENST00000606491 432 ntBASIC0.23□□□□□ -2.37
SPTSSBQ8NFR3 AC092656.1-203ENST00000624134 423 ntBASIC0.23□□□□□ -2.37
SPTSSBQ8NFR3 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.23□□□□□ -2.37
SPTSSBQ8NFR3 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.23□□□□□ -2.37
SPTSSBQ8NFR3 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
SPTSSBQ8NFR3 AL161781.1-201ENST00000354277 403 ntBASIC0.22□□□□□ -2.37
SPTSSBQ8NFR3 SNORA11.1-201ENST00000408133 129 ntBASIC0.22□□□□□ -2.37
SPTSSBQ8NFR3 RNU2-7P-201ENST00000410794 178 ntBASIC0.22□□□□□ -2.37
SPTSSBQ8NFR3 RNU6-1054P-201ENST00000411293 104 ntBASIC0.22□□□□□ -2.37
SPTSSBQ8NFR3 UBE2V1P10-201ENST00000414685 269 ntBASIC0.22□□□□□ -2.37
SPTSSBQ8NFR3 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC0.22□□□□□ -2.37
SPTSSBQ8NFR3 AL590623.1-201ENST00000427864 105 ntBASIC0.22□□□□□ -2.37
SPTSSBQ8NFR3 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC0.22□□□□□ -2.37
SPTSSBQ8NFR3 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.22□□□□□ -2.37
SPTSSBQ8NFR3 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.22□□□□□ -2.37
SPTSSBQ8NFR3 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 162.6 ms