Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
NUP43Q8NFH3 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NUP43Q8NFH3 BBX-203ENST00000402543 3980 ntTSL 5 BASIC3.76□□□□□ -1.81
NUP43Q8NFH3 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.76□□□□□ -1.81
NUP43Q8NFH3 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
NUP43Q8NFH3 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
NUP43Q8NFH3 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.75□□□□□ -1.81
NUP43Q8NFH3 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.75□□□□□ -1.81
NUP43Q8NFH3 RNA5SP167-201ENST00000365461 116 ntBASIC3.75□□□□□ -1.81
NUP43Q8NFH3 RNU6-125P-201ENST00000384505 107 ntBASIC3.75□□□□□ -1.81
NUP43Q8NFH3 MIR493-201ENST00000385254 89 ntBASIC3.75□□□□□ -1.81
NUP43Q8NFH3 RNU6-1197P-201ENST00000391183 107 ntBASIC3.75□□□□□ -1.81
NUP43Q8NFH3 UBA52P6-201ENST00000399822 382 ntBASIC3.75□□□□□ -1.81
NUP43Q8NFH3 MTCO2P33-201ENST00000402100 465 ntBASIC3.75□□□□□ -1.81
NUP43Q8NFH3 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.75□□□□□ -1.81
NUP43Q8NFH3 SNORD12B-201ENST00000410433 91 ntBASIC3.75□□□□□ -1.81
NUP43Q8NFH3 Y_RNA.626-201ENST00000411288 95 ntBASIC3.75□□□□□ -1.81
NUP43Q8NFH3 RPL23AP95-201ENST00000426806 265 ntBASIC3.75□□□□□ -1.81
NUP43Q8NFH3 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.75□□□□□ -1.81
NUP43Q8NFH3 AC096638.1-201ENST00000444678 216 ntBASIC3.75□□□□□ -1.81
NUP43Q8NFH3 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.75□□□□□ -1.81
NUP43Q8NFH3 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.75□□□□□ -1.81
NUP43Q8NFH3 Y_RNA.703-201ENST00000516846 111 ntBASIC3.75□□□□□ -1.81
NUP43Q8NFH3 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.75□□□□□ -1.81
NUP43Q8NFH3 MRPL49P2-201ENST00000521066 465 ntBASIC3.75□□□□□ -1.81
NUP43Q8NFH3 AC090281.1-201ENST00000523019 276 ntBASIC3.75□□□□□ -1.81
NUP43Q8NFH3 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
NUP43Q8NFH3 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.75□□□□□ -1.81
NUP43Q8NFH3 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
NUP43Q8NFH3 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.75□□□□□ -1.81
NUP43Q8NFH3 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
NUP43Q8NFH3 AL353743.1-202ENST00000431724 1695 ntBASIC3.75□□□□□ -1.81
NUP43Q8NFH3 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
NUP43Q8NFH3 AC018529.3-201ENST00000624212 2254 ntBASIC3.74□□□□□ -1.81
NUP43Q8NFH3 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NUP43Q8NFH3 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NUP43Q8NFH3 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
NUP43Q8NFH3 RNU5B-2P-201ENST00000363036 113 ntBASIC3.74□□□□□ -1.81
NUP43Q8NFH3 RNY4P28-201ENST00000365281 93 ntBASIC3.74□□□□□ -1.81
NUP43Q8NFH3 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
NUP43Q8NFH3 U8.10-201ENST00000384260 133 ntBASIC3.74□□□□□ -1.81
NUP43Q8NFH3 SNORA70C-201ENST00000384538 135 ntBASIC3.74□□□□□ -1.81
NUP43Q8NFH3 SNORA53-201ENST00000391141 249 ntBASIC3.74□□□□□ -1.81
NUP43Q8NFH3 RNU4-30P-201ENST00000410245 143 ntBASIC3.74□□□□□ -1.81
NUP43Q8NFH3 AL512844.2-201ENST00000433990 593 ntBASIC3.74□□□□□ -1.81
NUP43Q8NFH3 NDUFB4P6-201ENST00000436819 366 ntBASIC3.74□□□□□ -1.81
NUP43Q8NFH3 AL356535.1-201ENST00000440335 398 ntBASIC3.74□□□□□ -1.81
NUP43Q8NFH3 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.74□□□□□ -1.81
NUP43Q8NFH3 RPS26P15-201ENST00000488067 348 ntBASIC3.74□□□□□ -1.81
NUP43Q8NFH3 AC078817.1-201ENST00000492623 435 ntBASIC3.74□□□□□ -1.81
NUP43Q8NFH3 RPL30P5-201ENST00000494923 336 ntBASIC3.74□□□□□ -1.81
NUP43Q8NFH3 AC078918.1-201ENST00000498515 228 ntBASIC3.74□□□□□ -1.81
NUP43Q8NFH3 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.74□□□□□ -1.81
NUP43Q8NFH3 RNU2-31P-201ENST00000516954 155 ntBASIC3.74□□□□□ -1.81
NUP43Q8NFH3 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.74□□□□□ -1.81
NUP43Q8NFH3 AC087441.2-201ENST00000529141 262 ntBASIC3.74□□□□□ -1.81
NUP43Q8NFH3 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.74□□□□□ -1.81
NUP43Q8NFH3 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.74□□□□□ -1.81
NUP43Q8NFH3 AC020895.1-201ENST00000595362 272 ntBASIC3.74□□□□□ -1.81
NUP43Q8NFH3 MIR6868-201ENST00000611215 58 ntBASIC3.74□□□□□ -1.81
NUP43Q8NFH3 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.74□□□□□ -1.81
NUP43Q8NFH3 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
NUP43Q8NFH3 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NUP43Q8NFH3 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NUP43Q8NFH3 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
NUP43Q8NFH3 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
NUP43Q8NFH3 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
NUP43Q8NFH3 RNU6-740P-201ENST00000364734 105 ntBASIC3.73□□□□□ -1.81
NUP43Q8NFH3 MIR10B-201ENST00000385011 110 ntBASIC3.73□□□□□ -1.81
NUP43Q8NFH3 RPL26P27-201ENST00000414397 437 ntBASIC3.73□□□□□ -1.81
NUP43Q8NFH3 COX6CP10-201ENST00000416832 224 ntBASIC3.73□□□□□ -1.81
NUP43Q8NFH3 RPL21P66-201ENST00000426566 466 ntBASIC3.73□□□□□ -1.81
NUP43Q8NFH3 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.73□□□□□ -1.81
NUP43Q8NFH3 AC007969.2-201ENST00000441891 191 ntBASIC3.73□□□□□ -1.81
NUP43Q8NFH3 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.73□□□□□ -1.81
NUP43Q8NFH3 AC073901.1-201ENST00000462471 408 ntBASIC3.73□□□□□ -1.81
NUP43Q8NFH3 COX6CP14-201ENST00000469580 174 ntBASIC3.73□□□□□ -1.81
NUP43Q8NFH3 SNORD116-28-201ENST00000516123 91 ntBASIC3.73□□□□□ -1.81
NUP43Q8NFH3 RN7SKP49-201ENST00000516675 260 ntBASIC3.73□□□□□ -1.81
NUP43Q8NFH3 RNU6-1282P-201ENST00000516735 96 ntBASIC3.73□□□□□ -1.81
NUP43Q8NFH3 AK6P2-201ENST00000549020 471 ntBASIC3.73□□□□□ -1.81
NUP43Q8NFH3 HSPE1P5-201ENST00000561489 272 ntBASIC3.73□□□□□ -1.81
NUP43Q8NFH3 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.73□□□□□ -1.81
NUP43Q8NFH3 AL162424.1-201ENST00000602325 221 ntBASIC3.73□□□□□ -1.81
NUP43Q8NFH3 Z83818.1-201ENST00000603584 150 ntBASIC3.73□□□□□ -1.81
NUP43Q8NFH3 AC011921.3-201ENST00000605540 361 ntBASIC3.73□□□□□ -1.81
NUP43Q8NFH3 MIR6134-201ENST00000617606 109 ntBASIC3.73□□□□□ -1.81
NUP43Q8NFH3 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
NUP43Q8NFH3 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.73□□□□□ -1.81
NUP43Q8NFH3 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
NUP43Q8NFH3 HAUS6P2-201ENST00000433254 2404 ntBASIC3.73□□□□□ -1.81
NUP43Q8NFH3 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
NUP43Q8NFH3 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.73□□□□□ -1.81
NUP43Q8NFH3 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
NUP43Q8NFH3 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
NUP43Q8NFH3 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.72□□□□□ -1.81
NUP43Q8NFH3 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
NUP43Q8NFH3 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NUP43Q8NFH3 Y_RNA.122-201ENST00000363331 96 ntBASIC3.72□□□□□ -1.81
NUP43Q8NFH3 RN7SKP280-201ENST00000364196 304 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms