Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.22□□□□□ -2.05
CCDC197Q8NCU1 RPL7P54-201ENST00000438336 674 ntBASIC2.22□□□□□ -2.05
CCDC197Q8NCU1 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.22□□□□□ -2.05
CCDC197Q8NCU1 MTND1P1-201ENST00000445453 368 ntBASIC2.22□□□□□ -2.05
CCDC197Q8NCU1 PRSS3P4-201ENST00000453323 162 ntBASIC2.22□□□□□ -2.05
CCDC197Q8NCU1 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.22□□□□□ -2.05
CCDC197Q8NCU1 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.22□□□□□ -2.05
CCDC197Q8NCU1 RNU6-261P-201ENST00000459506 102 ntBASIC2.22□□□□□ -2.05
CCDC197Q8NCU1 DYNLL1P5-201ENST00000467158 270 ntBASIC2.22□□□□□ -2.05
CCDC197Q8NCU1 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.22□□□□□ -2.05
CCDC197Q8NCU1 AC019235.1-201ENST00000503847 207 ntBASIC2.22□□□□□ -2.05
CCDC197Q8NCU1 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.22□□□□□ -2.05
CCDC197Q8NCU1 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.22□□□□□ -2.05
CCDC197Q8NCU1 AC009127.3-201ENST00000570531 403 ntBASIC2.22□□□□□ -2.05
CCDC197Q8NCU1 AC090897.2-201ENST00000581715 130 ntBASIC2.22□□□□□ -2.05
CCDC197Q8NCU1 MIR4448-201ENST00000584360 86 ntBASIC2.22□□□□□ -2.05
CCDC197Q8NCU1 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.22□□□□□ -2.05
CCDC197Q8NCU1 AC007621.1-201ENST00000604544 437 ntBASIC2.22□□□□□ -2.05
CCDC197Q8NCU1 AC123912.5-201ENST00000605470 343 ntBASIC2.22□□□□□ -2.05
CCDC197Q8NCU1 AC002044.1-201ENST00000606707 158 ntBASIC2.22□□□□□ -2.05
CCDC197Q8NCU1 AC064807.4-201ENST00000607201 407 ntBASIC2.22□□□□□ -2.05
CCDC197Q8NCU1 AC096772.1-201ENST00000609146 564 ntBASIC2.22□□□□□ -2.05
CCDC197Q8NCU1 AC087241.4-201ENST00000612441 480 ntBASIC2.22□□□□□ -2.05
CCDC197Q8NCU1 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
CCDC197Q8NCU1 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CCDC197Q8NCU1 AC009233.1-201ENST00000616477 371 ntBASIC2.22□□□□□ -2.05
CCDC197Q8NCU1 uc_338.34-201ENST00000617467 174 ntBASIC2.22□□□□□ -2.05
CCDC197Q8NCU1 AL449363.1-201ENST00000617815 186 ntBASIC2.22□□□□□ -2.05
CCDC197Q8NCU1 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.22□□□□□ -2.05
CCDC197Q8NCU1 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.21□□□□□ -2.05
CCDC197Q8NCU1 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CCDC197Q8NCU1 RNU6-859P-201ENST00000362728 107 ntBASIC2.21□□□□□ -2.06
CCDC197Q8NCU1 SNORD114-19-201ENST00000363072 75 ntBASIC2.21□□□□□ -2.06
CCDC197Q8NCU1 RNU6-266P-201ENST00000364225 107 ntBASIC2.21□□□□□ -2.06
CCDC197Q8NCU1 RNA5SP72-201ENST00000364442 117 ntBASIC2.21□□□□□ -2.06
CCDC197Q8NCU1 RNA5SP125-201ENST00000364843 120 ntBASIC2.21□□□□□ -2.06
CCDC197Q8NCU1 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.21□□□□□ -2.06
CCDC197Q8NCU1 RN7SKP27-201ENST00000410684 333 ntBASIC2.21□□□□□ -2.06
CCDC197Q8NCU1 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.21□□□□□ -2.06
CCDC197Q8NCU1 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CCDC197Q8NCU1 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.21□□□□□ -2.06
CCDC197Q8NCU1 RPL7P12-201ENST00000446719 750 ntBASIC2.21□□□□□ -2.06
CCDC197Q8NCU1 AL139109.1-201ENST00000455491 297 ntBASIC2.21□□□□□ -2.06
CCDC197Q8NCU1 RNU7-167P-201ENST00000459160 62 ntBASIC2.21□□□□□ -2.06
CCDC197Q8NCU1 SRRM1P2-201ENST00000464531 1192 ntBASIC2.21□□□□□ -2.06
CCDC197Q8NCU1 FAM133DP-201ENST00000464802 691 ntBASIC2.21□□□□□ -2.06
CCDC197Q8NCU1 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.21□□□□□ -2.06
CCDC197Q8NCU1 RPL23AP49-201ENST00000492925 468 ntBASIC2.21□□□□□ -2.06
CCDC197Q8NCU1 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.21□□□□□ -2.06
CCDC197Q8NCU1 RNA5SP341-201ENST00000516261 117 ntBASIC2.21□□□□□ -2.06
CCDC197Q8NCU1 RNA5SP364-201ENST00000516938 78 ntBASIC2.21□□□□□ -2.06
CCDC197Q8NCU1 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CCDC197Q8NCU1 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.21□□□□□ -2.06
CCDC197Q8NCU1 AC023050.3-201ENST00000541142 333 ntBASIC2.21□□□□□ -2.06
CCDC197Q8NCU1 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.21□□□□□ -2.06
CCDC197Q8NCU1 AC090115.3-201ENST00000553218 849 ntBASIC2.21□□□□□ -2.06
CCDC197Q8NCU1 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.21□□□□□ -2.06
CCDC197Q8NCU1 APOOP1-201ENST00000604695 592 ntBASIC2.21□□□□□ -2.06
CCDC197Q8NCU1 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
CCDC197Q8NCU1 MIR6840-201ENST00000611937 71 ntBASIC2.21□□□□□ -2.06
CCDC197Q8NCU1 HULC.1-201ENST00000612720 240 ntBASIC2.21□□□□□ -2.06
CCDC197Q8NCU1 AC015540.1-201ENST00000615828 501 ntBASIC2.21□□□□□ -2.06
CCDC197Q8NCU1 AC084757.4-201ENST00000616350 526 ntBASIC2.21□□□□□ -2.06
CCDC197Q8NCU1 U4.7-201ENST00000638126 106 ntBASIC2.21□□□□□ -2.06
CCDC197Q8NCU1 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
CCDC197Q8NCU1 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.2□□□□□ -2.06
CCDC197Q8NCU1 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CCDC197Q8NCU1 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.2□□□□□ -2.06
CCDC197Q8NCU1 RNU6-37P-201ENST00000362692 107 ntBASIC2.2□□□□□ -2.06
CCDC197Q8NCU1 RNU6-1085P-201ENST00000363576 107 ntBASIC2.2□□□□□ -2.06
CCDC197Q8NCU1 RNU6-11P-201ENST00000364234 107 ntBASIC2.2□□□□□ -2.06
CCDC197Q8NCU1 RNU6-7-201ENST00000364784 107 ntBASIC2.2□□□□□ -2.06
CCDC197Q8NCU1 RNU1-140P-201ENST00000365040 165 ntBASIC2.2□□□□□ -2.06
CCDC197Q8NCU1 RNU6-8-201ENST00000365467 107 ntBASIC2.2□□□□□ -2.06
CCDC197Q8NCU1 RNU6-25P-201ENST00000383873 107 ntBASIC2.2□□□□□ -2.06
CCDC197Q8NCU1 SNORA69-201ENST00000383895 132 ntBASIC2.2□□□□□ -2.06
CCDC197Q8NCU1 RNU6-1-201ENST00000383898 107 ntBASIC2.2□□□□□ -2.06
CCDC197Q8NCU1 RNU6-48P-201ENST00000384161 107 ntBASIC2.2□□□□□ -2.06
CCDC197Q8NCU1 RNU6-36P-201ENST00000384172 107 ntBASIC2.2□□□□□ -2.06
CCDC197Q8NCU1 RNU6-4P-201ENST00000384205 107 ntBASIC2.2□□□□□ -2.06
CCDC197Q8NCU1 RNU6-5P-201ENST00000384238 107 ntBASIC2.2□□□□□ -2.06
CCDC197Q8NCU1 RNU6-3P-201ENST00000384314 107 ntBASIC2.2□□□□□ -2.06
CCDC197Q8NCU1 Y_RNA.481-201ENST00000384373 102 ntBASIC2.2□□□□□ -2.06
CCDC197Q8NCU1 RNU6-16P-201ENST00000384385 107 ntBASIC2.2□□□□□ -2.06
CCDC197Q8NCU1 RNU6-15P-201ENST00000384534 107 ntBASIC2.2□□□□□ -2.06
CCDC197Q8NCU1 RNU6-2-201ENST00000384627 107 ntBASIC2.2□□□□□ -2.06
CCDC197Q8NCU1 RNU6-29P-201ENST00000384637 107 ntBASIC2.2□□□□□ -2.06
CCDC197Q8NCU1 SNORD116-4-201ENST00000384733 96 ntBASIC2.2□□□□□ -2.06
CCDC197Q8NCU1 RNU6-9-201ENST00000384776 107 ntBASIC2.2□□□□□ -2.06
CCDC197Q8NCU1 RNU6-33P-201ENST00000384793 107 ntBASIC2.2□□□□□ -2.06
CCDC197Q8NCU1 MIR518C-201ENST00000384822 101 ntBASIC2.2□□□□□ -2.06
CCDC197Q8NCU1 MIR449B-201ENST00000384995 97 ntBASIC2.2□□□□□ -2.06
CCDC197Q8NCU1 AL606923.1-201ENST00000406616 190 ntBASIC2.2□□□□□ -2.06
CCDC197Q8NCU1 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.2□□□□□ -2.06
CCDC197Q8NCU1 AC236972.1-201ENST00000433225 199 ntBASIC2.2□□□□□ -2.06
CCDC197Q8NCU1 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.2□□□□□ -2.06
CCDC197Q8NCU1 PSPHP1-201ENST00000450062 261 ntBASIC2.2□□□□□ -2.06
CCDC197Q8NCU1 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.2□□□□□ -2.06
CCDC197Q8NCU1 AC012308.1-201ENST00000451232 178 ntBASIC2.2□□□□□ -2.06
CCDC197Q8NCU1 AC117503.1-201ENST00000472241 394 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms