Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 SEM1P1-201ENST00000506694 209 ntBASIC3.69□□□□□ -1.82
PRPF38AQ8NAV1 AC103851.1-201ENST00000506833 274 ntBASIC3.69□□□□□ -1.82
PRPF38AQ8NAV1 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.69□□□□□ -1.82
PRPF38AQ8NAV1 AP000889.1-201ENST00000530968 660 ntBASIC3.69□□□□□ -1.82
PRPF38AQ8NAV1 AP002404.1-201ENST00000532005 451 ntBASIC3.69□□□□□ -1.82
PRPF38AQ8NAV1 GLYCAM1-201ENST00000546596 285 ntBASIC3.69□□□□□ -1.82
PRPF38AQ8NAV1 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.69□□□□□ -1.82
PRPF38AQ8NAV1 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.69□□□□□ -1.82
PRPF38AQ8NAV1 MIR4790-201ENST00000577799 79 ntBASIC3.69□□□□□ -1.82
PRPF38AQ8NAV1 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.69□□□□□ -1.82
PRPF38AQ8NAV1 AC010620.2-201ENST00000600135 313 ntBASIC3.69□□□□□ -1.82
PRPF38AQ8NAV1 AC104237.2-201ENST00000612456 443 ntBASIC3.69□□□□□ -1.82
PRPF38AQ8NAV1 uc_338.14-201ENST00000613162 166 ntBASIC3.69□□□□□ -1.82
PRPF38AQ8NAV1 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.69□□□□□ -1.82
PRPF38AQ8NAV1 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.69□□□□□ -1.82
PRPF38AQ8NAV1 AC005858.4-201ENST00000623191 700 ntBASIC3.69□□□□□ -1.82
PRPF38AQ8NAV1 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
PRPF38AQ8NAV1 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PRPF38AQ8NAV1 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.69□□□□□ -1.82
PRPF38AQ8NAV1 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
PRPF38AQ8NAV1 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PRPF38AQ8NAV1 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.68□□□□□ -1.82
PRPF38AQ8NAV1 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.68□□□□□ -1.82
PRPF38AQ8NAV1 Y_RNA.263-201ENST00000364659 114 ntBASIC3.68□□□□□ -1.82
PRPF38AQ8NAV1 CST9LP2-201ENST00000437612 320 ntBASIC3.68□□□□□ -1.82
PRPF38AQ8NAV1 AC009969.1-201ENST00000438726 172 ntBASIC3.68□□□□□ -1.82
PRPF38AQ8NAV1 AC107399.1-201ENST00000451226 265 ntBASIC3.68□□□□□ -1.82
PRPF38AQ8NAV1 AMD1P1-201ENST00000457220 922 ntBASIC3.68□□□□□ -1.82
PRPF38AQ8NAV1 U8.21-201ENST00000459536 136 ntBASIC3.68□□□□□ -1.82
PRPF38AQ8NAV1 AC130509.1-201ENST00000464158 433 ntBASIC3.68□□□□□ -1.82
PRPF38AQ8NAV1 AC114801.2-201ENST00000503825 781 ntBASIC3.68□□□□□ -1.82
PRPF38AQ8NAV1 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.68□□□□□ -1.82
PRPF38AQ8NAV1 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.68□□□□□ -1.82
PRPF38AQ8NAV1 RNU5B-3P-201ENST00000516601 115 ntBASIC3.68□□□□□ -1.82
PRPF38AQ8NAV1 RNU6-1088P-201ENST00000516850 104 ntBASIC3.68□□□□□ -1.82
PRPF38AQ8NAV1 MIR2276-201ENST00000516886 89 ntBASIC3.68□□□□□ -1.82
PRPF38AQ8NAV1 AC104576.1-201ENST00000524225 88 ntBASIC3.68□□□□□ -1.82
PRPF38AQ8NAV1 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.68□□□□□ -1.82
PRPF38AQ8NAV1 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.68□□□□□ -1.82
PRPF38AQ8NAV1 UBL5P2-201ENST00000583788 219 ntBASIC3.68□□□□□ -1.82
PRPF38AQ8NAV1 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.68□□□□□ -1.82
PRPF38AQ8NAV1 AC096772.1-201ENST00000609146 564 ntBASIC3.68□□□□□ -1.82
PRPF38AQ8NAV1 AC244517.12-201ENST00000623581 663 ntBASIC3.68□□□□□ -1.82
PRPF38AQ8NAV1 MIR622-201ENST00000638396 96 ntBASIC3.68□□□□□ -1.82
PRPF38AQ8NAV1 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.68□□□□□ -1.82
PRPF38AQ8NAV1 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRPF38AQ8NAV1 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.67□□□□□ -1.82
PRPF38AQ8NAV1 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.67□□□□□ -1.82
PRPF38AQ8NAV1 Y_RNA.70-201ENST00000362886 110 ntBASIC3.67□□□□□ -1.82
PRPF38AQ8NAV1 RNU6-105P-201ENST00000363909 104 ntBASIC3.67□□□□□ -1.82
PRPF38AQ8NAV1 RNU1-140P-201ENST00000365040 165 ntBASIC3.67□□□□□ -1.82
PRPF38AQ8NAV1 RNU6-933P-201ENST00000384424 107 ntBASIC3.67□□□□□ -1.82
PRPF38AQ8NAV1 MT-TD-201ENST00000387419 68 ntBASIC3.67□□□□□ -1.82
PRPF38AQ8NAV1 RPS29P13-201ENST00000402041 169 ntBASIC3.67□□□□□ -1.82
PRPF38AQ8NAV1 AL356432.1-201ENST00000405809 419 ntBASIC3.67□□□□□ -1.82
PRPF38AQ8NAV1 AC074085.1-201ENST00000413598 418 ntBASIC3.67□□□□□ -1.82
PRPF38AQ8NAV1 AC074117.2-201ENST00000417130 397 ntBASIC3.67□□□□□ -1.82
PRPF38AQ8NAV1 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.67□□□□□ -1.82
PRPF38AQ8NAV1 MTND1P11-201ENST00000456661 876 ntBASIC3.67□□□□□ -1.82
PRPF38AQ8NAV1 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.67□□□□□ -1.82
PRPF38AQ8NAV1 AP001486.1-201ENST00000463339 476 ntBASIC3.67□□□□□ -1.82
PRPF38AQ8NAV1 AL049873.1-201ENST00000480540 376 ntBASIC3.67□□□□□ -1.82
PRPF38AQ8NAV1 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.67□□□□□ -1.82
PRPF38AQ8NAV1 AC008885.1-201ENST00000514930 301 ntBASIC3.67□□□□□ -1.82
PRPF38AQ8NAV1 SNORA31.6-201ENST00000516241 130 ntBASIC3.67□□□□□ -1.82
PRPF38AQ8NAV1 Y_RNA.682-201ENST00000516457 100 ntBASIC3.67□□□□□ -1.82
PRPF38AQ8NAV1 Y_RNA.691-201ENST00000516611 103 ntBASIC3.67□□□□□ -1.82
PRPF38AQ8NAV1 AC104027.1-201ENST00000521887 300 ntBASIC3.67□□□□□ -1.82
PRPF38AQ8NAV1 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.67□□□□□ -1.82
PRPF38AQ8NAV1 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.67□□□□□ -1.82
PRPF38AQ8NAV1 BNIP3P16-201ENST00000589779 534 ntBASIC3.67□□□□□ -1.82
PRPF38AQ8NAV1 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.67□□□□□ -1.82
PRPF38AQ8NAV1 AL121917.1-203ENST00000605534 577 ntBASIC3.67□□□□□ -1.82
PRPF38AQ8NAV1 AC064836.2-201ENST00000609491 462 ntBASIC3.67□□□□□ -1.82
PRPF38AQ8NAV1 uc_338.25-201ENST00000613756 156 ntBASIC3.67□□□□□ -1.82
PRPF38AQ8NAV1 Y_RNA.804-201ENST00000615262 101 ntBASIC3.67□□□□□ -1.82
PRPF38AQ8NAV1 AC024581.2-201ENST00000619986 252 ntBASIC3.67□□□□□ -1.82
PRPF38AQ8NAV1 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRPF38AQ8NAV1 AC093010.3-201ENST00000570269 15214 ntBASIC3.66□□□□□ -1.82
PRPF38AQ8NAV1 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PRPF38AQ8NAV1 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PRPF38AQ8NAV1 AL512633.1-201ENST00000399931 655 ntBASIC3.66□□□□□ -1.82
PRPF38AQ8NAV1 AC004383.1-201ENST00000438135 289 ntBASIC3.66□□□□□ -1.82
PRPF38AQ8NAV1 MRPL50P4-201ENST00000446432 475 ntBASIC3.66□□□□□ -1.82
PRPF38AQ8NAV1 MTND1P17-201ENST00000448961 204 ntBASIC3.66□□□□□ -1.82
PRPF38AQ8NAV1 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.66□□□□□ -1.82
PRPF38AQ8NAV1 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.66□□□□□ -1.82
PRPF38AQ8NAV1 EIF4BP1-201ENST00000554881 351 ntBASIC3.66□□□□□ -1.82
PRPF38AQ8NAV1 AC103996.1-201ENST00000555468 102 ntBASIC3.66□□□□□ -1.82
PRPF38AQ8NAV1 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.66□□□□□ -1.82
PRPF38AQ8NAV1 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.66□□□□□ -1.82
PRPF38AQ8NAV1 AC019159.1-201ENST00000605094 187 ntBASIC3.66□□□□□ -1.82
PRPF38AQ8NAV1 LARP7P1-201ENST00000605576 316 ntBASIC3.66□□□□□ -1.82
PRPF38AQ8NAV1 AC009994.1-201ENST00000606889 253 ntBASIC3.66□□□□□ -1.82
PRPF38AQ8NAV1 AC138627.2-201ENST00000624202 601 ntBASIC3.66□□□□□ -1.82
PRPF38AQ8NAV1 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.66□□□□□ -1.82
PRPF38AQ8NAV1 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PRPF38AQ8NAV1 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
PRPF38AQ8NAV1 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.65□□□□□ -1.82
PRPF38AQ8NAV1 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.65□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 230.9 ms