Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AC092447.10-201ENST00000620607 1652 ntBASIC0.27□□□□□ -2.37
VPS8Q8N3P4 ENSAP3-201ENST00000312710 333 ntBASIC0.27□□□□□ -2.37
VPS8Q8N3P4 Y_RNA.412-201ENST00000384001 104 ntBASIC0.27□□□□□ -2.37
VPS8Q8N3P4 MIR32-201ENST00000384965 70 ntBASIC0.27□□□□□ -2.37
VPS8Q8N3P4 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
VPS8Q8N3P4 AL589872.1-201ENST00000426602 288 ntBASIC0.27□□□□□ -2.37
VPS8Q8N3P4 OR2AQ1P-201ENST00000451972 200 ntBASIC0.27□□□□□ -2.37
VPS8Q8N3P4 RNA5SP269-201ENST00000459032 137 ntBASIC0.27□□□□□ -2.37
VPS8Q8N3P4 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC0.27□□□□□ -2.37
VPS8Q8N3P4 RPL30P6-201ENST00000475925 342 ntBASIC0.27□□□□□ -2.37
VPS8Q8N3P4 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.27□□□□□ -2.37
VPS8Q8N3P4 RNA5SP134-201ENST00000516492 96 ntBASIC0.27□□□□□ -2.37
VPS8Q8N3P4 ARL2BPP5-201ENST00000523141 481 ntBASIC0.27□□□□□ -2.37
VPS8Q8N3P4 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.27□□□□□ -2.37
VPS8Q8N3P4 MIR5093-201ENST00000583199 100 ntBASIC0.27□□□□□ -2.37
VPS8Q8N3P4 AP001429.1-201ENST00000602568 530 ntBASIC0.27□□□□□ -2.37
VPS8Q8N3P4 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.27□□□□□ -2.37
VPS8Q8N3P4 AC009509.4-201ENST00000619202 509 ntBASIC0.27□□□□□ -2.37
VPS8Q8N3P4 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.27□□□□□ -2.37
VPS8Q8N3P4 MTCO1P18-201ENST00000455518 1419 ntBASIC0.26□□□□□ -2.37
VPS8Q8N3P4 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.26□□□□□ -2.37
VPS8Q8N3P4 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
VPS8Q8N3P4 RNU6-23P-201ENST00000363283 107 ntBASIC0.26□□□□□ -2.37
VPS8Q8N3P4 RNU6-348P-201ENST00000384386 107 ntBASIC0.26□□□□□ -2.37
VPS8Q8N3P4 MIR605-201ENST00000385078 83 ntBASIC0.26□□□□□ -2.37
VPS8Q8N3P4 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
VPS8Q8N3P4 CETN4P-201ENST00000432407 469 ntBASIC0.26□□□□□ -2.37
VPS8Q8N3P4 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.26□□□□□ -2.37
VPS8Q8N3P4 AC091435.1-201ENST00000505442 584 ntBASIC0.26□□□□□ -2.37
VPS8Q8N3P4 RNA5SP476-201ENST00000516613 103 ntBASIC0.26□□□□□ -2.37
VPS8Q8N3P4 RNA5SP503-201ENST00000517047 117 ntBASIC0.26□□□□□ -2.37
VPS8Q8N3P4 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC0.26□□□□□ -2.37
VPS8Q8N3P4 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC0.26□□□□□ -2.37
VPS8Q8N3P4 AC087897.1-201ENST00000550134 156 ntBASIC0.26□□□□□ -2.37
VPS8Q8N3P4 TRAV32-201ENST00000553993 340 ntBASIC0.26□□□□□ -2.37
VPS8Q8N3P4 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.26□□□□□ -2.37
VPS8Q8N3P4 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC0.26□□□□□ -2.37
VPS8Q8N3P4 AC091489.2-201ENST00000566263 604 ntBASIC0.26□□□□□ -2.37
VPS8Q8N3P4 AL357094.1-201ENST00000603845 844 ntBASIC0.26□□□□□ -2.37
VPS8Q8N3P4 AC004908.3-201ENST00000610248 625 ntBASIC0.26□□□□□ -2.37
VPS8Q8N3P4 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC0.26□□□□□ -2.37
VPS8Q8N3P4 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
VPS8Q8N3P4 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.25□□□□□ -2.37
VPS8Q8N3P4 RNU6-840P-201ENST00000517275 65 ntBASIC0.25□□□□□ -2.37
VPS8Q8N3P4 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.25□□□□□ -2.37
VPS8Q8N3P4 AL138726.1-201ENST00000614873 333 ntBASIC0.25□□□□□ -2.37
VPS8Q8N3P4 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
VPS8Q8N3P4 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC0.24□□□□□ -2.37
VPS8Q8N3P4 RNU6-112P-201ENST00000363599 104 ntBASIC0.24□□□□□ -2.37
VPS8Q8N3P4 RNU6-288P-201ENST00000363690 104 ntBASIC0.24□□□□□ -2.37
VPS8Q8N3P4 RNU6-418P-201ENST00000384035 107 ntBASIC0.24□□□□□ -2.37
VPS8Q8N3P4 AL358794.1-201ENST00000445689 381 ntBASIC0.24□□□□□ -2.37
VPS8Q8N3P4 AC011005.2-201ENST00000487324 359 ntBASIC0.24□□□□□ -2.37
VPS8Q8N3P4 AC002350.1-201ENST00000490759 375 ntBASIC0.24□□□□□ -2.37
VPS8Q8N3P4 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.24□□□□□ -2.37
VPS8Q8N3P4 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC0.24□□□□□ -2.37
VPS8Q8N3P4 AL139344.1-201ENST00000605228 195 ntBASIC0.24□□□□□ -2.37
VPS8Q8N3P4 AL158163.2-201ENST00000619110 700 ntBASIC0.24□□□□□ -2.37
VPS8Q8N3P4 Y_RNA.458-201ENST00000384240 102 ntBASIC0.23□□□□□ -2.37
VPS8Q8N3P4 Y_RNA.476-201ENST00000384347 108 ntBASIC0.23□□□□□ -2.37
VPS8Q8N3P4 RPL31P35-201ENST00000431058 377 ntBASIC0.23□□□□□ -2.37
VPS8Q8N3P4 GTF2IP13-201ENST00000438487 386 ntBASIC0.23□□□□□ -2.37
VPS8Q8N3P4 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.23□□□□□ -2.37
VPS8Q8N3P4 RNU6-1092P-201ENST00000516955 87 ntBASIC0.23□□□□□ -2.37
VPS8Q8N3P4 APOOP3-201ENST00000536787 586 ntBASIC0.23□□□□□ -2.37
VPS8Q8N3P4 AC022432.1-201ENST00000595739 310 ntBASIC0.23□□□□□ -2.37
VPS8Q8N3P4 CLIC4P2-201ENST00000601934 717 ntBASIC0.23□□□□□ -2.37
VPS8Q8N3P4 AC091057.3-201ENST00000602684 733 ntBASIC0.23□□□□□ -2.37
VPS8Q8N3P4 AL355802.4-201ENST00000607635 548 ntBASIC0.23□□□□□ -2.37
VPS8Q8N3P4 AL132822.1-201ENST00000617063 513 ntBASIC0.23□□□□□ -2.37
VPS8Q8N3P4 AC130454.1-201ENST00000622948 401 ntBASIC0.23□□□□□ -2.37
VPS8Q8N3P4 AC104820.1-201ENST00000624183 307 ntBASIC0.23□□□□□ -2.37
VPS8Q8N3P4 SEC63P2-201ENST00000503863 1939 ntBASIC0.23□□□□□ -2.37
VPS8Q8N3P4 FARSBP1-201ENST00000435808 1778 ntBASIC0.22□□□□□ -2.37
VPS8Q8N3P4 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
VPS8Q8N3P4 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.22□□□□□ -2.37
VPS8Q8N3P4 CCNG1P1-201ENST00000406783 885 ntBASIC0.22□□□□□ -2.37
VPS8Q8N3P4 AC019070.1-201ENST00000415008 1024 ntBASIC0.22□□□□□ -2.37
VPS8Q8N3P4 AL096829.2-201ENST00000446582 742 ntBASIC0.22□□□□□ -2.37
VPS8Q8N3P4 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC0.22□□□□□ -2.37
VPS8Q8N3P4 RNU6-581P-201ENST00000516214 105 ntBASIC0.22□□□□□ -2.37
VPS8Q8N3P4 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
VPS8Q8N3P4 AC040896.1-201ENST00000613819 479 ntBASIC0.22□□□□□ -2.37
VPS8Q8N3P4 AC106858.1-201ENST00000637497 429 ntBASIC0.22□□□□□ -2.37
VPS8Q8N3P4 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.22□□□□□ -2.37
VPS8Q8N3P4 AC023934.1-201ENST00000574529 2389 ntBASIC0.22□□□□□ -2.37
VPS8Q8N3P4 MIR200A-201ENST00000384875 90 ntBASIC0.21□□□□□ -2.38
VPS8Q8N3P4 MIR525-201ENST00000384978 85 ntBASIC0.21□□□□□ -2.38
VPS8Q8N3P4 TIMM9P1-201ENST00000436122 256 ntBASIC0.21□□□□□ -2.38
VPS8Q8N3P4 HSPE1P9-201ENST00000440046 311 ntBASIC0.21□□□□□ -2.38
VPS8Q8N3P4 AC010631.1-201ENST00000474150 156 ntBASIC0.21□□□□□ -2.38
VPS8Q8N3P4 RPL30P1-201ENST00000488676 339 ntBASIC0.21□□□□□ -2.38
VPS8Q8N3P4 AKIRIN2P1-201ENST00000505898 352 ntBASIC0.21□□□□□ -2.38
VPS8Q8N3P4 RNA5SP285-201ENST00000516619 119 ntBASIC0.21□□□□□ -2.38
VPS8Q8N3P4 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.21□□□□□ -2.38
VPS8Q8N3P4 AC022387.2-201ENST00000604050 448 ntBASIC0.21□□□□□ -2.38
VPS8Q8N3P4 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC0.21□□□□□ -2.38
VPS8Q8N3P4 AC006213.5-201ENST00000619673 288 ntBASIC0.21□□□□□ -2.38
VPS8Q8N3P4 Y_RNA.99-201ENST00000363138 105 ntBASIC0.21□□□□□ -2.38
VPS8Q8N3P4 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms