Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.94□□□□□ -2.1
CCDC65Q8IXS2 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.94□□□□□ -2.1
CCDC65Q8IXS2 OOSP1P1-201ENST00000423265 274 ntBASIC1.94□□□□□ -2.1
CCDC65Q8IXS2 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.94□□□□□ -2.1
CCDC65Q8IXS2 AC000111.3-201ENST00000433478 193 ntBASIC1.94□□□□□ -2.1
CCDC65Q8IXS2 AL645568.3-201ENST00000433683 316 ntBASIC1.94□□□□□ -2.1
CCDC65Q8IXS2 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.94□□□□□ -2.1
CCDC65Q8IXS2 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.94□□□□□ -2.1
CCDC65Q8IXS2 GAPDHP17-201ENST00000449858 1001 ntBASIC1.94□□□□□ -2.1
CCDC65Q8IXS2 AL513124.1-201ENST00000450410 614 ntBASIC1.94□□□□□ -2.1
CCDC65Q8IXS2 RN7SL429P-201ENST00000479090 223 ntBASIC1.94□□□□□ -2.1
CCDC65Q8IXS2 RN7SL489P-201ENST00000486185 223 ntBASIC1.94□□□□□ -2.1
CCDC65Q8IXS2 RN7SL327P-201ENST00000488659 223 ntBASIC1.94□□□□□ -2.1
CCDC65Q8IXS2 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.94□□□□□ -2.1
CCDC65Q8IXS2 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.94□□□□□ -2.1
CCDC65Q8IXS2 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.94□□□□□ -2.1
CCDC65Q8IXS2 BNIP3P8-201ENST00000597863 560 ntBASIC1.94□□□□□ -2.1
CCDC65Q8IXS2 RN7SL853P-201ENST00000617250 223 ntBASIC1.94□□□□□ -2.1
CCDC65Q8IXS2 MIR5739-201ENST00000619803 80 ntBASIC1.94□□□□□ -2.1
CCDC65Q8IXS2 AL359740.1-201ENST00000624340 592 ntBASIC1.94□□□□□ -2.1
CCDC65Q8IXS2 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.94□□□□□ -2.1
CCDC65Q8IXS2 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CCDC65Q8IXS2 Y_RNA.576-201ENST00000384781 102 ntBASIC1.93□□□□□ -2.1
CCDC65Q8IXS2 RNU6-195P-201ENST00000411352 109 ntBASIC1.93□□□□□ -2.1
CCDC65Q8IXS2 MTND3P17-201ENST00000416968 344 ntBASIC1.93□□□□□ -2.1
CCDC65Q8IXS2 AL161788.1-201ENST00000441805 169 ntBASIC1.93□□□□□ -2.1
CCDC65Q8IXS2 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.93□□□□□ -2.1
CCDC65Q8IXS2 RPL23AP63-201ENST00000498752 471 ntBASIC1.93□□□□□ -2.1
CCDC65Q8IXS2 Y_RNA.687-201ENST00000516558 91 ntBASIC1.93□□□□□ -2.1
CCDC65Q8IXS2 AP005639.2-201ENST00000527592 928 ntBASIC1.93□□□□□ -2.1
CCDC65Q8IXS2 AP003072.2-201ENST00000527756 676 ntBASIC1.93□□□□□ -2.1
CCDC65Q8IXS2 OR5AL2P-201ENST00000532185 920 ntBASIC1.93□□□□□ -2.1
CCDC65Q8IXS2 HSBP1P1-201ENST00000555205 166 ntBASIC1.93□□□□□ -2.1
CCDC65Q8IXS2 BNIP3P30-201ENST00000601184 574 ntBASIC1.93□□□□□ -2.1
CCDC65Q8IXS2 AC098614.4-201ENST00000607601 462 ntBASIC1.93□□□□□ -2.1
CCDC65Q8IXS2 AC022202.1-201ENST00000613515 211 ntBASIC1.93□□□□□ -2.1
CCDC65Q8IXS2 AL133173.2-201ENST00000614270 90 ntBASIC1.93□□□□□ -2.1
CCDC65Q8IXS2 AC084768.2-201ENST00000622736 221 ntBASIC1.93□□□□□ -2.1
CCDC65Q8IXS2 AC019226.2-201ENST00000625973 424 ntBASIC1.93□□□□□ -2.1
CCDC65Q8IXS2 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.93□□□□□ -2.1
CCDC65Q8IXS2 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.93□□□□□ -2.1
CCDC65Q8IXS2 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.93□□□□□ -2.1
CCDC65Q8IXS2 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CCDC65Q8IXS2 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
CCDC65Q8IXS2 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CCDC65Q8IXS2 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.92□□□□□ -2.1
CCDC65Q8IXS2 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.92□□□□□ -2.1
CCDC65Q8IXS2 RNU6-1010P-201ENST00000362757 107 ntBASIC1.92□□□□□ -2.1
CCDC65Q8IXS2 RNU1-23P-201ENST00000363361 144 ntBASIC1.92□□□□□ -2.1
CCDC65Q8IXS2 RNU6-529P-201ENST00000363383 104 ntBASIC1.92□□□□□ -2.1
CCDC65Q8IXS2 SNORD115-7-201ENST00000365306 82 ntBASIC1.92□□□□□ -2.1
CCDC65Q8IXS2 RNU6-487P-201ENST00000365430 104 ntBASIC1.92□□□□□ -2.1
CCDC65Q8IXS2 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC1.92□□□□□ -2.1
CCDC65Q8IXS2 RNU6-1032P-201ENST00000384100 107 ntBASIC1.92□□□□□ -2.1
CCDC65Q8IXS2 RNU6-74P-201ENST00000384235 107 ntBASIC1.92□□□□□ -2.1
CCDC65Q8IXS2 RNU6-1179P-201ENST00000384667 107 ntBASIC1.92□□□□□ -2.1
CCDC65Q8IXS2 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CCDC65Q8IXS2 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CCDC65Q8IXS2 RNU2-8P-201ENST00000410727 190 ntBASIC1.92□□□□□ -2.1
CCDC65Q8IXS2 HMGN1P14-201ENST00000412459 517 ntBASIC1.92□□□□□ -2.1
CCDC65Q8IXS2 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.92□□□□□ -2.1
CCDC65Q8IXS2 MTND2P18-201ENST00000419962 1030 ntBASIC1.92□□□□□ -2.1
CCDC65Q8IXS2 MTCO3P5-201ENST00000433620 714 ntBASIC1.92□□□□□ -2.1
CCDC65Q8IXS2 AC073614.1-201ENST00000438690 650 ntBASIC1.92□□□□□ -2.1
CCDC65Q8IXS2 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.92□□□□□ -2.1
CCDC65Q8IXS2 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.92□□□□□ -2.1
CCDC65Q8IXS2 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.92□□□□□ -2.1
CCDC65Q8IXS2 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC1.92□□□□□ -2.1
CCDC65Q8IXS2 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.92□□□□□ -2.1
CCDC65Q8IXS2 AC087884.1-201ENST00000469738 328 ntBASIC1.92□□□□□ -2.1
CCDC65Q8IXS2 AC104564.1-201ENST00000493028 407 ntBASIC1.92□□□□□ -2.1
CCDC65Q8IXS2 AC116562.3-201ENST00000506136 177 ntBASIC1.92□□□□□ -2.1
CCDC65Q8IXS2 Vault.3-201ENST00000516676 95 ntBASIC1.92□□□□□ -2.1
CCDC65Q8IXS2 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.92□□□□□ -2.1
CCDC65Q8IXS2 AC068587.5-201ENST00000528506 175 ntBASIC1.92□□□□□ -2.1
CCDC65Q8IXS2 CBX3P4-201ENST00000538909 354 ntBASIC1.92□□□□□ -2.1
CCDC65Q8IXS2 BNIP3P6-201ENST00000549284 499 ntBASIC1.92□□□□□ -2.1
CCDC65Q8IXS2 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.92□□□□□ -2.1
CCDC65Q8IXS2 AC073539.2-201ENST00000597113 165 ntBASIC1.92□□□□□ -2.1
CCDC65Q8IXS2 AC021646.1-201ENST00000605469 484 ntBASIC1.92□□□□□ -2.1
CCDC65Q8IXS2 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.92□□□□□ -2.1
CCDC65Q8IXS2 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CCDC65Q8IXS2 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.92□□□□□ -2.1
CCDC65Q8IXS2 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
CCDC65Q8IXS2 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CCDC65Q8IXS2 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.91□□□□□ -2.1
CCDC65Q8IXS2 AL356292.1-201ENST00000283110 373 ntBASIC1.91□□□□□ -2.1
CCDC65Q8IXS2 RNU6-858P-201ENST00000362436 107 ntBASIC1.91□□□□□ -2.1
CCDC65Q8IXS2 Y_RNA.40-201ENST00000362645 93 ntBASIC1.91□□□□□ -2.1
CCDC65Q8IXS2 SNORD114-19-201ENST00000363072 75 ntBASIC1.91□□□□□ -2.1
CCDC65Q8IXS2 RNY4P34-201ENST00000364779 95 ntBASIC1.91□□□□□ -2.1
CCDC65Q8IXS2 SNORD48-201ENST00000364953 64 ntBASIC1.91□□□□□ -2.1
CCDC65Q8IXS2 Y_RNA.367-201ENST00000365544 101 ntBASIC1.91□□□□□ -2.1
CCDC65Q8IXS2 MT-TH-201ENST00000387441 69 ntBASIC1.91□□□□□ -2.1
CCDC65Q8IXS2 RNU2-3P-201ENST00000410144 191 ntBASIC1.91□□□□□ -2.1
CCDC65Q8IXS2 RNU6-248P-201ENST00000410720 107 ntBASIC1.91□□□□□ -2.1
CCDC65Q8IXS2 RNU2-63P-201ENST00000410792 194 ntBASIC1.91□□□□□ -2.1
CCDC65Q8IXS2 RPS20P15-201ENST00000412792 311 ntBASIC1.91□□□□□ -2.1
CCDC65Q8IXS2 PGBD4P6-201ENST00000421501 610 ntBASIC1.91□□□□□ -2.1
CCDC65Q8IXS2 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms