Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
TRIM48Q8IWZ4 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TRIM48Q8IWZ4 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
TRIM48Q8IWZ4 AC008725.1-201ENST00000605123 2263 ntBASIC3.69□□□□□ -1.82
TRIM48Q8IWZ4 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.69□□□□□ -1.82
TRIM48Q8IWZ4 Y_RNA.27-201ENST00000362540 103 ntBASIC3.69□□□□□ -1.82
TRIM48Q8IWZ4 U3.13-201ENST00000364804 214 ntBASIC3.69□□□□□ -1.82
TRIM48Q8IWZ4 SNORD116-20-201ENST00000384529 92 ntBASIC3.69□□□□□ -1.82
TRIM48Q8IWZ4 MIR215-201ENST00000384858 110 ntBASIC3.69□□□□□ -1.82
TRIM48Q8IWZ4 RHEBP3-201ENST00000411920 351 ntBASIC3.69□□□□□ -1.82
TRIM48Q8IWZ4 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.69□□□□□ -1.82
TRIM48Q8IWZ4 RPL21P40-201ENST00000428586 483 ntBASIC3.69□□□□□ -1.82
TRIM48Q8IWZ4 AC011742.1-201ENST00000431448 434 ntBASIC3.69□□□□□ -1.82
TRIM48Q8IWZ4 GOT2P5-201ENST00000433995 546 ntBASIC3.69□□□□□ -1.82
TRIM48Q8IWZ4 AC243964.1-201ENST00000441814 261 ntBASIC3.69□□□□□ -1.82
TRIM48Q8IWZ4 HMGB3P8-201ENST00000449709 577 ntBASIC3.69□□□□□ -1.82
TRIM48Q8IWZ4 AL513124.1-201ENST00000450410 614 ntBASIC3.69□□□□□ -1.82
TRIM48Q8IWZ4 TRBVB-201ENST00000477100 408 ntBASIC3.69□□□□□ -1.82
TRIM48Q8IWZ4 Y_RNA.673-201ENST00000516306 88 ntBASIC3.69□□□□□ -1.82
TRIM48Q8IWZ4 SNORA67.7-201ENST00000516664 135 ntBASIC3.69□□□□□ -1.82
TRIM48Q8IWZ4 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.69□□□□□ -1.82
TRIM48Q8IWZ4 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.69□□□□□ -1.82
TRIM48Q8IWZ4 AL442163.3-201ENST00000554110 156 ntBASIC3.69□□□□□ -1.82
TRIM48Q8IWZ4 MIR4429-201ENST00000580105 73 ntBASIC3.69□□□□□ -1.82
TRIM48Q8IWZ4 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.69□□□□□ -1.82
TRIM48Q8IWZ4 U6.92-201ENST00000636464 89 ntBASIC3.69□□□□□ -1.82
TRIM48Q8IWZ4 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TRIM48Q8IWZ4 AC006504.1-201ENST00000562493 3666 ntBASIC3.69□□□□□ -1.82
TRIM48Q8IWZ4 UBE3AP2-201ENST00000429033 2259 ntBASIC3.69□□□□□ -1.82
TRIM48Q8IWZ4 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
TRIM48Q8IWZ4 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
TRIM48Q8IWZ4 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
TRIM48Q8IWZ4 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
TRIM48Q8IWZ4 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.68□□□□□ -1.82
TRIM48Q8IWZ4 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
TRIM48Q8IWZ4 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TRIM48Q8IWZ4 RNU6-222P-201ENST00000362438 107 ntBASIC3.68□□□□□ -1.82
TRIM48Q8IWZ4 Y_RNA.552-201ENST00000384665 112 ntBASIC3.68□□□□□ -1.82
TRIM48Q8IWZ4 MIR670-201ENST00000390142 98 ntBASIC3.68□□□□□ -1.82
TRIM48Q8IWZ4 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
TRIM48Q8IWZ4 AL358453.1-201ENST00000422522 250 ntBASIC3.68□□□□□ -1.82
TRIM48Q8IWZ4 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.68□□□□□ -1.82
TRIM48Q8IWZ4 AC124916.1-201ENST00000444020 547 ntBASIC3.68□□□□□ -1.82
TRIM48Q8IWZ4 MTND4LP30-201ENST00000454092 297 ntBASIC3.68□□□□□ -1.82
TRIM48Q8IWZ4 snoU13.30-201ENST00000458951 104 ntBASIC3.68□□□□□ -1.82
TRIM48Q8IWZ4 AL133162.1-201ENST00000463228 453 ntBASIC3.68□□□□□ -1.82
TRIM48Q8IWZ4 RPL39P38-201ENST00000467018 153 ntBASIC3.68□□□□□ -1.82
TRIM48Q8IWZ4 RPL30P1-201ENST00000488676 339 ntBASIC3.68□□□□□ -1.82
TRIM48Q8IWZ4 RPL23AP75-201ENST00000491601 451 ntBASIC3.68□□□□□ -1.82
TRIM48Q8IWZ4 AC023141.12-201ENST00000512399 199 ntBASIC3.68□□□□□ -1.82
TRIM48Q8IWZ4 RNU2-58P-201ENST00000516403 183 ntBASIC3.68□□□□□ -1.82
TRIM48Q8IWZ4 SCARNA14-201ENST00000516903 136 ntBASIC3.68□□□□□ -1.82
TRIM48Q8IWZ4 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.68□□□□□ -1.82
TRIM48Q8IWZ4 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.68□□□□□ -1.82
TRIM48Q8IWZ4 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.68□□□□□ -1.82
TRIM48Q8IWZ4 AC012433.1-201ENST00000588916 398 ntBASIC3.68□□□□□ -1.82
TRIM48Q8IWZ4 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.68□□□□□ -1.82
TRIM48Q8IWZ4 AL355877.2-201ENST00000603670 358 ntBASIC3.68□□□□□ -1.82
TRIM48Q8IWZ4 AC110741.2-201ENST00000605278 268 ntBASIC3.68□□□□□ -1.82
TRIM48Q8IWZ4 AC039056.2-201ENST00000622261 511 ntBASIC3.68□□□□□ -1.82
TRIM48Q8IWZ4 U6.104-201ENST00000637979 90 ntBASIC3.68□□□□□ -1.82
TRIM48Q8IWZ4 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.68□□□□□ -1.82
TRIM48Q8IWZ4 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
TRIM48Q8IWZ4 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
TRIM48Q8IWZ4 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
TRIM48Q8IWZ4 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
TRIM48Q8IWZ4 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.68□□□□□ -1.82
TRIM48Q8IWZ4 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.68□□□□□ -1.82
TRIM48Q8IWZ4 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
TRIM48Q8IWZ4 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TRIM48Q8IWZ4 SRP72P2-201ENST00000344851 1979 ntBASIC3.67□□□□□ -1.82
TRIM48Q8IWZ4 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TRIM48Q8IWZ4 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TRIM48Q8IWZ4 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TRIM48Q8IWZ4 RNU6-858P-201ENST00000362436 107 ntBASIC3.67□□□□□ -1.82
TRIM48Q8IWZ4 RNA5SP124-201ENST00000362739 110 ntBASIC3.67□□□□□ -1.82
TRIM48Q8IWZ4 SNORD56.1-201ENST00000362913 68 ntBASIC3.67□□□□□ -1.82
TRIM48Q8IWZ4 SNORA20.1-201ENST00000364790 130 ntBASIC3.67□□□□□ -1.82
TRIM48Q8IWZ4 RNU1-140P-201ENST00000365040 165 ntBASIC3.67□□□□□ -1.82
TRIM48Q8IWZ4 RNU6-968P-201ENST00000384076 107 ntBASIC3.67□□□□□ -1.82
TRIM48Q8IWZ4 RNU6-1093P-201ENST00000391194 107 ntBASIC3.67□□□□□ -1.82
TRIM48Q8IWZ4 RPL21P17-201ENST00000397467 475 ntBASIC3.67□□□□□ -1.82
TRIM48Q8IWZ4 MIR1183-201ENST00000408856 89 ntBASIC3.67□□□□□ -1.82
TRIM48Q8IWZ4 RNU2-20P-201ENST00000410425 191 ntBASIC3.67□□□□□ -1.82
TRIM48Q8IWZ4 RPL26P27-201ENST00000414397 437 ntBASIC3.67□□□□□ -1.82
TRIM48Q8IWZ4 AC091286.1-201ENST00000431233 461 ntBASIC3.67□□□□□ -1.82
TRIM48Q8IWZ4 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.67□□□□□ -1.82
TRIM48Q8IWZ4 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.67□□□□□ -1.82
TRIM48Q8IWZ4 RPL37P4-201ENST00000448908 268 ntBASIC3.67□□□□□ -1.82
TRIM48Q8IWZ4 AL353705.4-201ENST00000449661 238 ntBASIC3.67□□□□□ -1.82
TRIM48Q8IWZ4 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.67□□□□□ -1.82
TRIM48Q8IWZ4 SNRPGP7-201ENST00000469016 106 ntBASIC3.67□□□□□ -1.82
TRIM48Q8IWZ4 ANXA2P1-201ENST00000505539 926 ntBASIC3.67□□□□□ -1.82
TRIM48Q8IWZ4 BTF3L4P4-201ENST00000506381 449 ntBASIC3.67□□□□□ -1.82
TRIM48Q8IWZ4 AC067942.3-201ENST00000512025 362 ntBASIC3.67□□□□□ -1.82
TRIM48Q8IWZ4 AC022868.1-201ENST00000517767 391 ntBASIC3.67□□□□□ -1.82
TRIM48Q8IWZ4 AC091144.1-201ENST00000519573 138 ntBASIC3.67□□□□□ -1.82
TRIM48Q8IWZ4 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.67□□□□□ -1.82
TRIM48Q8IWZ4 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.67□□□□□ -1.82
TRIM48Q8IWZ4 MIR5187-201ENST00000583479 76 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms