Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 MIR518D-201ENST00000385014 87 ntBASIC2.49□□□□□ -2.01
CCDC60Q8IWA6 SNORD70.1-201ENST00000391007 85 ntBASIC2.49□□□□□ -2.01
CCDC60Q8IWA6 AL606923.1-201ENST00000406616 190 ntBASIC2.49□□□□□ -2.01
CCDC60Q8IWA6 MTCO1P21-201ENST00000416634 589 ntBASIC2.49□□□□□ -2.01
CCDC60Q8IWA6 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC60Q8IWA6 PTGES3P4-201ENST00000426243 356 ntBASIC2.49□□□□□ -2.01
CCDC60Q8IWA6 TOMM20P4-201ENST00000427861 435 ntBASIC2.49□□□□□ -2.01
CCDC60Q8IWA6 AL669831.1-202ENST00000428504 417 ntBASIC2.49□□□□□ -2.01
CCDC60Q8IWA6 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC60Q8IWA6 GTF2IP13-201ENST00000438487 386 ntBASIC2.49□□□□□ -2.01
CCDC60Q8IWA6 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CCDC60Q8IWA6 AC090096.1-201ENST00000489168 390 ntBASIC2.49□□□□□ -2.01
CCDC60Q8IWA6 AC082651.2-201ENST00000496833 166 ntBASIC2.49□□□□□ -2.01
CCDC60Q8IWA6 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC60Q8IWA6 AC104136.1-201ENST00000512969 394 ntBASIC2.49□□□□□ -2.01
CCDC60Q8IWA6 MIR892C-201ENST00000516410 77 ntBASIC2.49□□□□□ -2.01
CCDC60Q8IWA6 SNORD19.2-201ENST00000516978 73 ntBASIC2.49□□□□□ -2.01
CCDC60Q8IWA6 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC60Q8IWA6 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC60Q8IWA6 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.49□□□□□ -2.01
CCDC60Q8IWA6 EIF1P4-201ENST00000572664 335 ntBASIC2.49□□□□□ -2.01
CCDC60Q8IWA6 BNIP3P30-201ENST00000601184 574 ntBASIC2.49□□□□□ -2.01
CCDC60Q8IWA6 AC093788.1-201ENST00000609356 927 ntBASIC2.49□□□□□ -2.01
CCDC60Q8IWA6 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.49□□□□□ -2.01
CCDC60Q8IWA6 MIR6873-201ENST00000622788 63 ntBASIC2.49□□□□□ -2.01
CCDC60Q8IWA6 AC004520.1-201ENST00000608362 1413 ntBASIC2.49□□□□□ -2.01
CCDC60Q8IWA6 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.49□□□□□ -2.01
CCDC60Q8IWA6 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CCDC60Q8IWA6 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.48□□□□□ -2.01
CCDC60Q8IWA6 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
CCDC60Q8IWA6 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CCDC60Q8IWA6 AL139276.1-201ENST00000311910 1001 ntBASIC2.48□□□□□ -2.01
CCDC60Q8IWA6 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CCDC60Q8IWA6 RNU6-858P-201ENST00000362436 107 ntBASIC2.48□□□□□ -2.01
CCDC60Q8IWA6 SNORA69-201ENST00000383895 132 ntBASIC2.48□□□□□ -2.01
CCDC60Q8IWA6 AL590002.1-201ENST00000406554 418 ntBASIC2.48□□□□□ -2.01
CCDC60Q8IWA6 AL353621.1-201ENST00000418219 243 ntBASIC2.48□□□□□ -2.01
CCDC60Q8IWA6 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.48□□□□□ -2.01
CCDC60Q8IWA6 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.48□□□□□ -2.01
CCDC60Q8IWA6 AL121890.1-201ENST00000435457 205 ntBASIC2.48□□□□□ -2.01
CCDC60Q8IWA6 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.48□□□□□ -2.01
CCDC60Q8IWA6 OSTCP8-201ENST00000445117 448 ntBASIC2.48□□□□□ -2.01
CCDC60Q8IWA6 NDUFB1P2-201ENST00000449477 176 ntBASIC2.48□□□□□ -2.01
CCDC60Q8IWA6 AC083798.1-201ENST00000472671 131 ntBASIC2.48□□□□□ -2.01
CCDC60Q8IWA6 AC019235.1-201ENST00000503847 207 ntBASIC2.48□□□□□ -2.01
CCDC60Q8IWA6 AC074344.1-201ENST00000512823 224 ntBASIC2.48□□□□□ -2.01
CCDC60Q8IWA6 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.48□□□□□ -2.01
CCDC60Q8IWA6 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.48□□□□□ -2.01
CCDC60Q8IWA6 Y_RNA.693-201ENST00000516641 110 ntBASIC2.48□□□□□ -2.01
CCDC60Q8IWA6 ACA59.2-201ENST00000517061 156 ntBASIC2.48□□□□□ -2.01
CCDC60Q8IWA6 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.48□□□□□ -2.01
CCDC60Q8IWA6 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.48□□□□□ -2.01
CCDC60Q8IWA6 AL391813.1-201ENST00000603098 260 ntBASIC2.48□□□□□ -2.01
CCDC60Q8IWA6 AC087045.1-201ENST00000605856 382 ntBASIC2.48□□□□□ -2.01
CCDC60Q8IWA6 uc_338.34-201ENST00000617467 174 ntBASIC2.48□□□□□ -2.01
CCDC60Q8IWA6 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.48□□□□□ -2.01
CCDC60Q8IWA6 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.48□□□□□ -2.01
CCDC60Q8IWA6 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.48□□□□□ -2.01
CCDC60Q8IWA6 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.48□□□□□ -2.01
CCDC60Q8IWA6 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.47□□□□□ -2.01
CCDC60Q8IWA6 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.47□□□□□ -2.01
CCDC60Q8IWA6 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CCDC60Q8IWA6 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
CCDC60Q8IWA6 SNORA16.2-201ENST00000390991 127 ntBASIC2.47□□□□□ -2.01
CCDC60Q8IWA6 U3.37-201ENST00000408528 213 ntBASIC2.47□□□□□ -2.01
CCDC60Q8IWA6 TIMM9P3-201ENST00000428659 274 ntBASIC2.47□□□□□ -2.01
CCDC60Q8IWA6 C8orf59P1-201ENST00000429930 303 ntBASIC2.47□□□□□ -2.01
CCDC60Q8IWA6 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.47□□□□□ -2.01
CCDC60Q8IWA6 PRPS1P1-201ENST00000445305 876 ntBASIC2.47□□□□□ -2.01
CCDC60Q8IWA6 RNU7-26P-201ENST00000458980 63 ntBASIC2.47□□□□□ -2.01
CCDC60Q8IWA6 RNU6-261P-201ENST00000459506 102 ntBASIC2.47□□□□□ -2.01
CCDC60Q8IWA6 AP000852.1-201ENST00000472460 573 ntBASIC2.47□□□□□ -2.01
CCDC60Q8IWA6 AC011005.2-201ENST00000487324 359 ntBASIC2.47□□□□□ -2.01
CCDC60Q8IWA6 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.47□□□□□ -2.01
CCDC60Q8IWA6 RNA5SP401-201ENST00000515920 127 ntBASIC2.47□□□□□ -2.01
CCDC60Q8IWA6 Y_RNA.687-201ENST00000516558 91 ntBASIC2.47□□□□□ -2.01
CCDC60Q8IWA6 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.47□□□□□ -2.01
CCDC60Q8IWA6 AL137161.1-201ENST00000532231 390 ntBASIC2.47□□□□□ -2.01
CCDC60Q8IWA6 AK6P1-201ENST00000540219 478 ntBASIC2.47□□□□□ -2.01
CCDC60Q8IWA6 HMGB1P33-201ENST00000563485 527 ntBASIC2.47□□□□□ -2.01
CCDC60Q8IWA6 AL049779.4-201ENST00000604500 156 ntBASIC2.47□□□□□ -2.01
CCDC60Q8IWA6 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.47□□□□□ -2.01
CCDC60Q8IWA6 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.47□□□□□ -2.01
CCDC60Q8IWA6 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.47□□□□□ -2.01
CCDC60Q8IWA6 AL031601.2-202ENST00000622650 282 ntBASIC2.47□□□□□ -2.01
CCDC60Q8IWA6 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.47□□□□□ -2.01
CCDC60Q8IWA6 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.46□□□□□ -2.02
CCDC60Q8IWA6 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.46□□□□□ -2.02
CCDC60Q8IWA6 RNU6-72P-201ENST00000384285 79 ntBASIC2.46□□□□□ -2.02
CCDC60Q8IWA6 RNU6-434P-201ENST00000384376 107 ntBASIC2.46□□□□□ -2.02
CCDC60Q8IWA6 SNORA64-201ENST00000384674 134 ntBASIC2.46□□□□□ -2.02
CCDC60Q8IWA6 RNU6-1072P-201ENST00000384703 107 ntBASIC2.46□□□□□ -2.02
CCDC60Q8IWA6 RNU6-443P-201ENST00000384780 107 ntBASIC2.46□□□□□ -2.02
CCDC60Q8IWA6 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CCDC60Q8IWA6 AL079342.1-201ENST00000401460 267 ntBASIC2.46□□□□□ -2.02
CCDC60Q8IWA6 FTH1P15-201ENST00000406984 280 ntBASIC2.46□□□□□ -2.02
CCDC60Q8IWA6 RNU6-607P-201ENST00000411283 108 ntBASIC2.46□□□□□ -2.02
CCDC60Q8IWA6 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.46□□□□□ -2.02
CCDC60Q8IWA6 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC60Q8IWA6 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms