Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 RNU6-702P-201ENST00000364982 107 ntBASIC4.39□□□□□ -1.71
USP48Q86UV5 RNU6-898P-201ENST00000365627 104 ntBASIC4.39□□□□□ -1.71
USP48Q86UV5 Y_RNA.455-201ENST00000384230 98 ntBASIC4.39□□□□□ -1.71
USP48Q86UV5 MIR518D-201ENST00000385014 87 ntBASIC4.39□□□□□ -1.71
USP48Q86UV5 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
USP48Q86UV5 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC4.39□□□□□ -1.71
USP48Q86UV5 AC098831.1-201ENST00000440661 216 ntBASIC4.39□□□□□ -1.71
USP48Q86UV5 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC4.39□□□□□ -1.71
USP48Q86UV5 RBMY2UP-201ENST00000453474 324 ntBASIC4.39□□□□□ -1.71
USP48Q86UV5 CEACAMP4-201ENST00000457676 421 ntBASIC4.39□□□□□ -1.71
USP48Q86UV5 AC025518.1-201ENST00000479856 347 ntBASIC4.39□□□□□ -1.71
USP48Q86UV5 AC022447.4-201ENST00000504053 364 ntBASIC4.39□□□□□ -1.71
USP48Q86UV5 RNU6-612P-201ENST00000516909 102 ntBASIC4.39□□□□□ -1.71
USP48Q86UV5 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.39□□□□□ -1.71
USP48Q86UV5 CBX3P8-201ENST00000532412 525 ntBASIC4.39□□□□□ -1.71
USP48Q86UV5 AL161670.1-201ENST00000554348 137 ntBASIC4.39□□□□□ -1.71
USP48Q86UV5 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.39□□□□□ -1.71
USP48Q86UV5 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.39□□□□□ -1.71
USP48Q86UV5 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.39□□□□□ -1.71
USP48Q86UV5 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.39□□□□□ -1.71
USP48Q86UV5 AL442067.1-201ENST00000613261 223 ntBASIC4.39□□□□□ -1.71
USP48Q86UV5 AC002076.2-201ENST00000617362 122 ntBASIC4.39□□□□□ -1.71
USP48Q86UV5 MIR6076-201ENST00000617521 113 ntBASIC4.39□□□□□ -1.71
USP48Q86UV5 AC073308.1-201ENST00000623696 305 ntBASIC4.39□□□□□ -1.71
USP48Q86UV5 MPP6-209ENST00000625307 126 ntTSL 5 BASIC4.39□□□□□ -1.71
USP48Q86UV5 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
USP48Q86UV5 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.38□□□□□ -1.71
USP48Q86UV5 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
USP48Q86UV5 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
USP48Q86UV5 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
USP48Q86UV5 MTND5P7-201ENST00000413558 1798 ntBASIC4.38□□□□□ -1.71
USP48Q86UV5 MAPK10-373ENST00000641983 6772 ntBASIC4.38□□□□□ -1.71
USP48Q86UV5 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
USP48Q86UV5 RNA5SP295-201ENST00000362655 121 ntBASIC4.38□□□□□ -1.71
USP48Q86UV5 SNORD6-201ENST00000365444 73 ntBASIC4.38□□□□□ -1.71
USP48Q86UV5 Y_RNA.574-201ENST00000384766 95 ntBASIC4.38□□□□□ -1.71
USP48Q86UV5 RPS29P13-201ENST00000402041 169 ntBASIC4.38□□□□□ -1.71
USP48Q86UV5 RN7SKP58-201ENST00000411010 305 ntBASIC4.38□□□□□ -1.71
USP48Q86UV5 EIF4EP2-201ENST00000422816 654 ntBASIC4.38□□□□□ -1.71
USP48Q86UV5 CEP57L1P1-201ENST00000430943 1201 ntBASIC4.38□□□□□ -1.71
USP48Q86UV5 AC124916.1-201ENST00000444020 547 ntBASIC4.38□□□□□ -1.71
USP48Q86UV5 RPL26P9-201ENST00000457466 433 ntBASIC4.38□□□□□ -1.71
USP48Q86UV5 AC010655.3-201ENST00000478818 450 ntBASIC4.38□□□□□ -1.71
USP48Q86UV5 FO393415.2-201ENST00000480085 343 ntBASIC4.38□□□□□ -1.71
USP48Q86UV5 NACAP3-201ENST00000552100 481 ntBASIC4.38□□□□□ -1.71
USP48Q86UV5 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
USP48Q86UV5 AC091812.1-201ENST00000432235 1948 ntBASIC4.38□□□□□ -1.71
USP48Q86UV5 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
USP48Q86UV5 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.38□□□□□ -1.71
USP48Q86UV5 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.38□□□□□ -1.71
USP48Q86UV5 AL079305.1-201ENST00000623159 3008 ntBASIC4.37□□□□□ -1.71
USP48Q86UV5 Y_RNA.176-201ENST00000363815 109 ntBASIC4.37□□□□□ -1.71
USP48Q86UV5 RNU6-270P-201ENST00000364131 105 ntBASIC4.37□□□□□ -1.71
USP48Q86UV5 RNU6-336P-201ENST00000364891 107 ntBASIC4.37□□□□□ -1.71
USP48Q86UV5 AC099548.1-201ENST00000421443 426 ntBASIC4.37□□□□□ -1.71
USP48Q86UV5 MRPS18CP6-201ENST00000423587 223 ntBASIC4.37□□□□□ -1.71
USP48Q86UV5 AL353997.1-201ENST00000432936 108 ntBASIC4.37□□□□□ -1.71
USP48Q86UV5 RPS29P31-201ENST00000446147 164 ntBASIC4.37□□□□□ -1.71
USP48Q86UV5 AL590664.1-201ENST00000448065 339 ntBASIC4.37□□□□□ -1.71
USP48Q86UV5 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC4.37□□□□□ -1.71
USP48Q86UV5 RPS27AP10-201ENST00000496103 208 ntBASIC4.37□□□□□ -1.71
USP48Q86UV5 AC116655.1-201ENST00000508324 901 ntBASIC4.37□□□□□ -1.71
USP48Q86UV5 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.37□□□□□ -1.71
USP48Q86UV5 SNORA43.2-201ENST00000516652 128 ntBASIC4.37□□□□□ -1.71
USP48Q86UV5 RNU4-77P-201ENST00000516692 156 ntBASIC4.37□□□□□ -1.71
USP48Q86UV5 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.37□□□□□ -1.71
USP48Q86UV5 MIR4738-201ENST00000579134 87 ntBASIC4.37□□□□□ -1.71
USP48Q86UV5 AC024153.1-201ENST00000603103 365 ntBASIC4.37□□□□□ -1.71
USP48Q86UV5 PRR13P7-201ENST00000605538 430 ntBASIC4.37□□□□□ -1.71
USP48Q86UV5 SNORD58B-201ENST00000607313 66 ntBASIC4.37□□□□□ -1.71
USP48Q86UV5 MIR7112-201ENST00000616126 65 ntBASIC4.37□□□□□ -1.71
USP48Q86UV5 MIR6134-201ENST00000617606 109 ntBASIC4.37□□□□□ -1.71
USP48Q86UV5 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
USP48Q86UV5 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
USP48Q86UV5 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
USP48Q86UV5 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.36□□□□□ -1.71
USP48Q86UV5 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
USP48Q86UV5 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
USP48Q86UV5 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
USP48Q86UV5 RNU4-35P-201ENST00000362588 141 ntBASIC4.36□□□□□ -1.71
USP48Q86UV5 Y_RNA.48-201ENST00000362710 103 ntBASIC4.36□□□□□ -1.71
USP48Q86UV5 RNY1P16-201ENST00000363063 111 ntBASIC4.36□□□□□ -1.71
USP48Q86UV5 RNU6-283P-201ENST00000364788 107 ntBASIC4.36□□□□□ -1.71
USP48Q86UV5 SNORA63.7-201ENST00000365579 123 ntBASIC4.36□□□□□ -1.71
USP48Q86UV5 RNA5SP424-201ENST00000390988 115 ntBASIC4.36□□□□□ -1.71
USP48Q86UV5 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.36□□□□□ -1.71
USP48Q86UV5 MIR1289-1-201ENST00000408836 144 ntBASIC4.36□□□□□ -1.71
USP48Q86UV5 MTND3P9-201ENST00000429526 346 ntBASIC4.36□□□□□ -1.71
USP48Q86UV5 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.36□□□□□ -1.71
USP48Q86UV5 SNRPGP3-201ENST00000469405 227 ntBASIC4.36□□□□□ -1.71
USP48Q86UV5 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC4.36□□□□□ -1.71
USP48Q86UV5 RPL30P14-201ENST00000482744 348 ntBASIC4.36□□□□□ -1.71
USP48Q86UV5 AC015911.1-201ENST00000495111 156 ntBASIC4.36□□□□□ -1.71
USP48Q86UV5 AC110794.1-201ENST00000505816 425 ntBASIC4.36□□□□□ -1.71
USP48Q86UV5 AC010265.1-201ENST00000513509 211 ntBASIC4.36□□□□□ -1.71
USP48Q86UV5 RNU6-635P-201ENST00000516651 102 ntBASIC4.36□□□□□ -1.71
USP48Q86UV5 GNAI2P1-201ENST00000541815 315 ntBASIC4.36□□□□□ -1.71
USP48Q86UV5 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.36□□□□□ -1.71
USP48Q86UV5 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC4.36□□□□□ -1.71
USP48Q86UV5 AC092447.9-201ENST00000603395 144 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms