Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 MTCO2P19-201ENST00000427513 598 ntBASIC2.61□□□□□ -1.99
PRPF39Q86UA1 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.61□□□□□ -1.99
PRPF39Q86UA1 MTND1P29-201ENST00000448112 647 ntBASIC2.61□□□□□ -1.99
PRPF39Q86UA1 RPS3P1-201ENST00000456781 192 ntBASIC2.61□□□□□ -1.99
PRPF39Q86UA1 AP000852.1-201ENST00000472460 573 ntBASIC2.61□□□□□ -1.99
PRPF39Q86UA1 MTCO3P9-201ENST00000506989 781 ntBASIC2.61□□□□□ -1.99
PRPF39Q86UA1 AC008526.1-201ENST00000509149 338 ntBASIC2.61□□□□□ -1.99
PRPF39Q86UA1 RNU2-53P-201ENST00000516257 147 ntBASIC2.61□□□□□ -1.99
PRPF39Q86UA1 SNORA31.23-201ENST00000517219 133 ntBASIC2.61□□□□□ -1.99
PRPF39Q86UA1 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.61□□□□□ -1.99
PRPF39Q86UA1 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.61□□□□□ -1.99
PRPF39Q86UA1 HIF1AP1-201ENST00000553642 175 ntBASIC2.61□□□□□ -1.99
PRPF39Q86UA1 NDUFAF4P1-201ENST00000559425 519 ntBASIC2.61□□□□□ -1.99
PRPF39Q86UA1 AC078795.2-201ENST00000602835 1252 ntBASIC2.61□□□□□ -1.99
PRPF39Q86UA1 AL670379.2-201ENST00000604983 252 ntBASIC2.61□□□□□ -1.99
PRPF39Q86UA1 RNU6-6P-201ENST00000606623 107 ntBASIC2.61□□□□□ -1.99
PRPF39Q86UA1 AC008121.3-201ENST00000618726 433 ntBASIC2.61□□□□□ -1.99
PRPF39Q86UA1 RMST_7.1-201ENST00000621935 268 ntBASIC2.61□□□□□ -1.99
PRPF39Q86UA1 AC080100.1-201ENST00000624239 5356 ntBASIC2.61□□□□□ -1.99
PRPF39Q86UA1 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
PRPF39Q86UA1 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.6□□□□□ -1.99
PRPF39Q86UA1 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
PRPF39Q86UA1 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
PRPF39Q86UA1 Y_RNA.381-201ENST00000365666 102 ntBASIC2.6□□□□□ -1.99
PRPF39Q86UA1 MIR186-201ENST00000384988 86 ntBASIC2.6□□□□□ -1.99
PRPF39Q86UA1 RNA5SP390-201ENST00000410191 113 ntBASIC2.6□□□□□ -1.99
PRPF39Q86UA1 RN7SKP158-201ENST00000410453 326 ntBASIC2.6□□□□□ -1.99
PRPF39Q86UA1 RNU6-1245P-201ENST00000411130 106 ntBASIC2.6□□□□□ -1.99
PRPF39Q86UA1 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.6□□□□□ -1.99
PRPF39Q86UA1 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC2.6□□□□□ -1.99
PRPF39Q86UA1 AC091133.4-201ENST00000511142 308 ntBASIC2.6□□□□□ -1.99
PRPF39Q86UA1 RNU2-69P-201ENST00000516061 100 ntBASIC2.6□□□□□ -1.99
PRPF39Q86UA1 AP005435.4-201ENST00000529514 284 ntBASIC2.6□□□□□ -1.99
PRPF39Q86UA1 AL137161.1-201ENST00000532231 390 ntBASIC2.6□□□□□ -1.99
PRPF39Q86UA1 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.6□□□□□ -1.99
PRPF39Q86UA1 AC090897.2-201ENST00000581715 130 ntBASIC2.6□□□□□ -1.99
PRPF39Q86UA1 MIR3945-201ENST00000581853 98 ntBASIC2.6□□□□□ -1.99
PRPF39Q86UA1 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.6□□□□□ -1.99
PRPF39Q86UA1 NDUFA8P1-201ENST00000605525 367 ntBASIC2.6□□□□□ -1.99
PRPF39Q86UA1 U2.17-201ENST00000611454 95 ntBASIC2.6□□□□□ -1.99
PRPF39Q86UA1 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
PRPF39Q86UA1 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
PRPF39Q86UA1 AC009233.1-201ENST00000616477 371 ntBASIC2.6□□□□□ -1.99
PRPF39Q86UA1 AC009090.3-201ENST00000616553 565 ntBASIC2.6□□□□□ -1.99
PRPF39Q86UA1 AC007792.1-201ENST00000623023 402 ntBASIC2.6□□□□□ -1.99
PRPF39Q86UA1 AC139792.3-201ENST00000623525 224 ntBASIC2.6□□□□□ -1.99
PRPF39Q86UA1 Z69720.2-201ENST00000624755 279 ntBASIC2.6□□□□□ -1.99
PRPF39Q86UA1 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
PRPF39Q86UA1 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
PRPF39Q86UA1 MAPK10-266ENST00000641066 6555 ntBASIC2.59□□□□□ -1.99
PRPF39Q86UA1 RNA5SP393-201ENST00000363423 117 ntBASIC2.59□□□□□ -1.99
PRPF39Q86UA1 RNU1-91P-201ENST00000364746 163 ntBASIC2.59□□□□□ -1.99
PRPF39Q86UA1 RNU6-622P-201ENST00000384272 103 ntBASIC2.59□□□□□ -1.99
PRPF39Q86UA1 Y_RNA.559-201ENST00000384686 107 ntBASIC2.59□□□□□ -1.99
PRPF39Q86UA1 SNORA16.2-201ENST00000390991 127 ntBASIC2.59□□□□□ -1.99
PRPF39Q86UA1 AL139095.1-201ENST00000404326 391 ntBASIC2.59□□□□□ -1.99
PRPF39Q86UA1 AL606923.1-201ENST00000406616 190 ntBASIC2.59□□□□□ -1.99
PRPF39Q86UA1 BTF3P7-201ENST00000407097 488 ntBASIC2.59□□□□□ -1.99
PRPF39Q86UA1 AC007064.1-201ENST00000412238 351 ntBASIC2.59□□□□□ -1.99
PRPF39Q86UA1 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.59□□□□□ -1.99
PRPF39Q86UA1 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.59□□□□□ -1.99
PRPF39Q86UA1 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.59□□□□□ -1.99
PRPF39Q86UA1 AL161788.1-201ENST00000441805 169 ntBASIC2.59□□□□□ -1.99
PRPF39Q86UA1 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
PRPF39Q86UA1 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.59□□□□□ -1.99
PRPF39Q86UA1 MTCO2P18-201ENST00000457151 658 ntBASIC2.59□□□□□ -1.99
PRPF39Q86UA1 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.59□□□□□ -1.99
PRPF39Q86UA1 RPL30P12-201ENST00000474666 353 ntBASIC2.59□□□□□ -1.99
PRPF39Q86UA1 AL163973.1-201ENST00000484753 577 ntBASIC2.59□□□□□ -1.99
PRPF39Q86UA1 AP001025.1-201ENST00000486139 332 ntBASIC2.59□□□□□ -1.99
PRPF39Q86UA1 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.59□□□□□ -1.99
PRPF39Q86UA1 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.59□□□□□ -1.99
PRPF39Q86UA1 RNU6-377P-201ENST00000515965 102 ntBASIC2.59□□□□□ -1.99
PRPF39Q86UA1 RNU1-104P-201ENST00000517280 175 ntBASIC2.59□□□□□ -1.99
PRPF39Q86UA1 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.59□□□□□ -1.99
PRPF39Q86UA1 AC109329.1-201ENST00000518744 317 ntBASIC2.59□□□□□ -1.99
PRPF39Q86UA1 AGGF1P4-201ENST00000568249 801 ntBASIC2.59□□□□□ -1.99
PRPF39Q86UA1 Z99129.1-201ENST00000612510 255 ntBASIC2.59□□□□□ -1.99
PRPF39Q86UA1 AL158209.2-201ENST00000619266 216 ntBASIC2.59□□□□□ -1.99
PRPF39Q86UA1 AC090517.3-201ENST00000625170 141 ntBASIC2.59□□□□□ -1.99
PRPF39Q86UA1 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.59□□□□□ -1.99
PRPF39Q86UA1 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.59□□□□□ -1.99
PRPF39Q86UA1 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.59□□□□□ -2
PRPF39Q86UA1 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.59□□□□□ -2
PRPF39Q86UA1 RNU6-655P-201ENST00000362858 107 ntBASIC2.58□□□□□ -2
PRPF39Q86UA1 OR5H15-201ENST00000383696 930 ntBASIC2.58□□□□□ -2
PRPF39Q86UA1 RNU6-259P-201ENST00000383999 107 ntBASIC2.58□□□□□ -2
PRPF39Q86UA1 RNU1-52P-201ENST00000384190 164 ntBASIC2.58□□□□□ -2
PRPF39Q86UA1 MIR27B-201ENST00000385129 97 ntBASIC2.58□□□□□ -2
PRPF39Q86UA1 RN7SKP284-201ENST00000411002 343 ntBASIC2.58□□□□□ -2
PRPF39Q86UA1 AL353193.1-201ENST00000421444 268 ntBASIC2.58□□□□□ -2
PRPF39Q86UA1 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.58□□□□□ -2
PRPF39Q86UA1 AC117503.1-201ENST00000472241 394 ntBASIC2.58□□□□□ -2
PRPF39Q86UA1 TRBV12-1-201ENST00000479785 344 ntBASIC2.58□□□□□ -2
PRPF39Q86UA1 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.58□□□□□ -2
PRPF39Q86UA1 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.58□□□□□ -2
PRPF39Q86UA1 MTND4P7-201ENST00000523876 130 ntBASIC2.58□□□□□ -2
PRPF39Q86UA1 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.58□□□□□ -2
PRPF39Q86UA1 AC024909.2-201ENST00000553035 286 ntBASIC2.58□□□□□ -2
PRPF39Q86UA1 AC104073.3-201ENST00000610942 955 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 144.6 ms