Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 MTCYBP34-201ENST00000439552 670 ntBASIC-0.35□□□□□ -2.47
VPS13CQ709C8 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC-0.35□□□□□ -2.47
VPS13CQ709C8 AC023157.2-201ENST00000540596 141 ntBASIC-0.35□□□□□ -2.47
VPS13CQ709C8 MIR4441-201ENST00000582623 100 ntBASIC-0.35□□□□□ -2.47
VPS13CQ709C8 MIR4324-201ENST00000584846 72 ntBASIC-0.35□□□□□ -2.47
VPS13CQ709C8 AC010738.1-201ENST00000604970 987 ntBASIC-0.35□□□□□ -2.47
VPS13CQ709C8 SNORD14C-201ENST00000365382 88 ntBASIC-0.35□□□□□ -2.47
VPS13CQ709C8 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC-0.35□□□□□ -2.47
VPS13CQ709C8 MTND1P20-201ENST00000430341 950 ntBASIC-0.35□□□□□ -2.47
VPS13CQ709C8 RNA5SP461-201ENST00000516451 104 ntBASIC-0.35□□□□□ -2.47
VPS13CQ709C8 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC-0.35□□□□□ -2.47
VPS13CQ709C8 AC093023.1-201ENST00000547375 507 ntBASIC-0.35□□□□□ -2.47
VPS13CQ709C8 SNORD114-5-201ENST00000362928 70 ntBASIC-0.35□□□□□ -2.47
VPS13CQ709C8 RNU6-1097P-201ENST00000363586 107 ntBASIC-0.35□□□□□ -2.47
VPS13CQ709C8 Y_RNA.352-201ENST00000365439 102 ntBASIC-0.35□□□□□ -2.47
VPS13CQ709C8 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.35□□□□□ -2.47
VPS13CQ709C8 UBE2D3P2-201ENST00000424409 445 ntBASIC-0.35□□□□□ -2.47
VPS13CQ709C8 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC-0.35□□□□□ -2.47
VPS13CQ709C8 AC013267.1-201ENST00000458227 267 ntBASIC-0.35□□□□□ -2.47
VPS13CQ709C8 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC-0.35□□□□□ -2.47
VPS13CQ709C8 MTND1P22-201ENST00000510572 951 ntBASIC-0.35□□□□□ -2.47
VPS13CQ709C8 Y_RNA.711-201ENST00000516993 102 ntBASIC-0.35□□□□□ -2.47
VPS13CQ709C8 RN7SKP5-201ENST00000517045 272 ntBASIC-0.35□□□□□ -2.47
VPS13CQ709C8 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC-0.35□□□□□ -2.47
VPS13CQ709C8 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC-0.35□□□□□ -2.47
VPS13CQ709C8 AC090079.2-201ENST00000575289 768 ntBASIC-0.35□□□□□ -2.47
VPS13CQ709C8 AC060771.1-201ENST00000582031 164 ntBASIC-0.35□□□□□ -2.47
VPS13CQ709C8 AP000238.1-201ENST00000608759 426 ntBASIC-0.35□□□□□ -2.47
VPS13CQ709C8 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC-0.36□□□□□ -2.47
VPS13CQ709C8 Y_RNA.475-201ENST00000384345 101 ntBASIC-0.36□□□□□ -2.47
VPS13CQ709C8 DAP3P1-201ENST00000441522 278 ntBASIC-0.36□□□□□ -2.47
VPS13CQ709C8 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC-0.36□□□□□ -2.47
VPS13CQ709C8 BPTFP1-201ENST00000579209 492 ntBASIC-0.36□□□□□ -2.47
VPS13CQ709C8 AC138749.5-201ENST00000611461 208 ntBASIC-0.36□□□□□ -2.47
VPS13CQ709C8 RNU6-119P-201ENST00000364882 107 ntBASIC-0.36□□□□□ -2.47
VPS13CQ709C8 RNU6-950P-201ENST00000384651 107 ntBASIC-0.36□□□□□ -2.47
VPS13CQ709C8 MIR218-1-201ENST00000384999 110 ntBASIC-0.36□□□□□ -2.47
VPS13CQ709C8 MTCYBP24-201ENST00000420387 1106 ntBASIC-0.36□□□□□ -2.47
VPS13CQ709C8 RPS27P16-201ENST00000425758 201 ntBASIC-0.36□□□□□ -2.47
VPS13CQ709C8 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.36□□□□□ -2.47
VPS13CQ709C8 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.36□□□□□ -2.47
VPS13CQ709C8 AL391597.1-201ENST00000618707 694 ntBASIC-0.36□□□□□ -2.47
VPS13CQ709C8 PCMTD1P7-201ENST00000634506 357 ntBASIC-0.36□□□□□ -2.47
VPS13CQ709C8 MIR95-201ENST00000385072 81 ntBASIC-0.36□□□□□ -2.47
VPS13CQ709C8 AL355796.1-201ENST00000406706 323 ntBASIC-0.36□□□□□ -2.47
VPS13CQ709C8 AC025465.3-201ENST00000510570 311 ntBASIC-0.36□□□□□ -2.47
VPS13CQ709C8 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC-0.36□□□□□ -2.47
VPS13CQ709C8 AC006963.1-201ENST00000624003 1052 ntBASIC-0.36□□□□□ -2.47
VPS13CQ709C8 Z99571.1-201ENST00000636677 394 ntBASIC-0.36□□□□□ -2.47
VPS13CQ709C8 BX664727.1-201ENST00000416024 466 ntBASIC-0.37□□□□□ -2.47
VPS13CQ709C8 MTATP6P22-201ENST00000507369 598 ntBASIC-0.37□□□□□ -2.47
VPS13CQ709C8 AL031667.3-201ENST00000620124 655 ntBASIC-0.37□□□□□ -2.47
VPS13CQ709C8 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.37□□□□□ -2.47
VPS13CQ709C8 AC233266.1-201ENST00000454518 96 ntBASIC-0.37□□□□□ -2.47
VPS13CQ709C8 KRTAP13-6P-201ENST00000508999 371 ntBASIC-0.37□□□□□ -2.47
VPS13CQ709C8 TRAPPC2P7-201ENST00000509650 231 ntBASIC-0.37□□□□□ -2.47
VPS13CQ709C8 AC108157.1-201ENST00000510511 539 ntBASIC-0.37□□□□□ -2.47
VPS13CQ709C8 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC-0.37□□□□□ -2.47
VPS13CQ709C8 AC242852.1-201ENST00000612151 96 ntBASIC-0.37□□□□□ -2.47
VPS13CQ709C8 AC244015.1-201ENST00000622301 99 ntBASIC-0.37□□□□□ -2.47
VPS13CQ709C8 AC100810.6-201ENST00000638068 285 ntBASIC-0.37□□□□□ -2.47
VPS13CQ709C8 SNORA42.1-201ENST00000363515 137 ntBASIC-0.37□□□□□ -2.47
VPS13CQ709C8 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC-0.37□□□□□ -2.47
VPS13CQ709C8 RNU6-735P-201ENST00000410612 107 ntBASIC-0.37□□□□□ -2.47
VPS13CQ709C8 RNU6ATAC13P-201ENST00000516152 131 ntBASIC-0.37□□□□□ -2.47
VPS13CQ709C8 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC-0.37□□□□□ -2.47
VPS13CQ709C8 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC-0.37□□□□□ -2.47
VPS13CQ709C8 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC-0.37□□□□□ -2.47
VPS13CQ709C8 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.37□□□□□ -2.47
VPS13CQ709C8 AL049641.1-201ENST00000441055 1948 ntBASIC-0.38□□□□□ -2.47
VPS13CQ709C8 MIR103A1-201ENST00000362165 78 ntBASIC-0.38□□□□□ -2.47
VPS13CQ709C8 SNORA63D-201ENST00000364359 132 ntBASIC-0.38□□□□□ -2.47
VPS13CQ709C8 SNORD1A-201ENST00000364968 72 ntBASIC-0.38□□□□□ -2.47
VPS13CQ709C8 SNORD114-24-201ENST00000365029 72 ntBASIC-0.38□□□□□ -2.47
VPS13CQ709C8 MIR493-201ENST00000385254 89 ntBASIC-0.38□□□□□ -2.47
VPS13CQ709C8 Y_RNA.616-201ENST00000410835 95 ntBASIC-0.38□□□□□ -2.47
VPS13CQ709C8 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC-0.38□□□□□ -2.47
VPS13CQ709C8 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC-0.38□□□□□ -2.47
VPS13CQ709C8 AL596245.1-201ENST00000618994 362 ntBASIC-0.38□□□□□ -2.47
VPS13CQ709C8 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.38□□□□□ -2.47
VPS13CQ709C8 RNU6-793P-201ENST00000384233 104 ntBASIC-0.38□□□□□ -2.47
VPS13CQ709C8 RNU6-1197P-201ENST00000391183 107 ntBASIC-0.38□□□□□ -2.47
VPS13CQ709C8 RNVU1-2-201ENST00000516326 135 ntBASIC-0.38□□□□□ -2.47
VPS13CQ709C8 RN7SKP88-201ENST00000516847 250 ntBASIC-0.38□□□□□ -2.47
VPS13CQ709C8 7SK.8-201ENST00000612110 250 ntBASIC-0.38□□□□□ -2.47
VPS13CQ709C8 7SK.11-201ENST00000615477 250 ntBASIC-0.38□□□□□ -2.47
VPS13CQ709C8 MIR5739-201ENST00000619803 80 ntBASIC-0.38□□□□□ -2.47
VPS13CQ709C8 7SK.13-201ENST00000622040 250 ntBASIC-0.38□□□□□ -2.47
VPS13CQ709C8 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC-0.39□□□□□ -2.47
VPS13CQ709C8 POC1B-211ENST00000549504 581 ntTSL 5 BASIC-0.39□□□□□ -2.47
VPS13CQ709C8 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC-0.39□□□□□ -2.47
VPS13CQ709C8 RNU11-3P-201ENST00000391111 133 ntBASIC-0.39□□□□□ -2.47
VPS13CQ709C8 MIR1250-201ENST00000408098 113 ntBASIC-0.39□□□□□ -2.47
VPS13CQ709C8 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC-0.39□□□□□ -2.47
VPS13CQ709C8 AC023194.1-201ENST00000493084 308 ntBASIC-0.39□□□□□ -2.47
VPS13CQ709C8 HIGD1AP17-201ENST00000554576 276 ntBASIC-0.39□□□□□ -2.47
VPS13CQ709C8 MIR196A2-201ENST00000385189 110 ntBASIC-0.39□□□□□ -2.47
VPS13CQ709C8 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC-0.39□□□□□ -2.47
VPS13CQ709C8 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC-0.39□□□□□ -2.47
VPS13CQ709C8 AC245102.2-201ENST00000448956 180 ntBASIC-0.39□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms