Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 AC002546.1-201ENST00000588041 2504 ntBASIC4.14□□□□□ -1.75
RUFY4Q6ZNE9 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RUFY4Q6ZNE9 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
RUFY4Q6ZNE9 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.13□□□□□ -1.75
RUFY4Q6ZNE9 SNORA11.2-201ENST00000408318 127 ntBASIC4.13□□□□□ -1.75
RUFY4Q6ZNE9 RNU2-37P-201ENST00000410695 177 ntBASIC4.13□□□□□ -1.75
RUFY4Q6ZNE9 RN7SKP53-201ENST00000411337 315 ntBASIC4.13□□□□□ -1.75
RUFY4Q6ZNE9 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.13□□□□□ -1.75
RUFY4Q6ZNE9 AC092423.1-201ENST00000430165 186 ntBASIC4.13□□□□□ -1.75
RUFY4Q6ZNE9 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.13□□□□□ -1.75
RUFY4Q6ZNE9 AC108059.2-201ENST00000434626 151 ntBASIC4.13□□□□□ -1.75
RUFY4Q6ZNE9 OSTCP8-201ENST00000445117 448 ntBASIC4.13□□□□□ -1.75
RUFY4Q6ZNE9 HMGN2P16-201ENST00000456802 261 ntBASIC4.13□□□□□ -1.75
RUFY4Q6ZNE9 RPL22P13-201ENST00000493291 347 ntBASIC4.13□□□□□ -1.75
RUFY4Q6ZNE9 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.13□□□□□ -1.75
RUFY4Q6ZNE9 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC4.13□□□□□ -1.75
RUFY4Q6ZNE9 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.13□□□□□ -1.75
RUFY4Q6ZNE9 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.13□□□□□ -1.75
RUFY4Q6ZNE9 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.13□□□□□ -1.75
RUFY4Q6ZNE9 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC4.13□□□□□ -1.75
RUFY4Q6ZNE9 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.13□□□□□ -1.75
RUFY4Q6ZNE9 AL356157.2-201ENST00000605122 111 ntBASIC4.13□□□□□ -1.75
RUFY4Q6ZNE9 MIR1244-1-201ENST00000612829 85 ntBASIC4.13□□□□□ -1.75
RUFY4Q6ZNE9 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
RUFY4Q6ZNE9 AC048347.1-201ENST00000624621 427 ntBASIC4.13□□□□□ -1.75
RUFY4Q6ZNE9 MIR1244-3-201ENST00000635744 85 ntBASIC4.13□□□□□ -1.75
RUFY4Q6ZNE9 MIR1244-2-201ENST00000636449 85 ntBASIC4.13□□□□□ -1.75
RUFY4Q6ZNE9 MIR1244-4-202ENST00000636813 85 ntBASIC4.13□□□□□ -1.75
RUFY4Q6ZNE9 AL133383.2-201ENST00000622958 2336 ntBASIC4.13□□□□□ -1.75
RUFY4Q6ZNE9 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.13□□□□□ -1.75
RUFY4Q6ZNE9 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.13□□□□□ -1.75
RUFY4Q6ZNE9 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.12□□□□□ -1.75
RUFY4Q6ZNE9 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RUFY4Q6ZNE9 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RUFY4Q6ZNE9 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
RUFY4Q6ZNE9 RNU6-942P-201ENST00000363002 107 ntBASIC4.12□□□□□ -1.75
RUFY4Q6ZNE9 RNU6-527P-201ENST00000363425 104 ntBASIC4.12□□□□□ -1.75
RUFY4Q6ZNE9 RNU6-884P-201ENST00000363889 107 ntBASIC4.12□□□□□ -1.75
RUFY4Q6ZNE9 SNORA1.3-201ENST00000384676 136 ntBASIC4.12□□□□□ -1.75
RUFY4Q6ZNE9 PTMAP5-201ENST00000393073 333 ntBASIC4.12□□□□□ -1.75
RUFY4Q6ZNE9 AL591043.1-201ENST00000432461 424 ntBASIC4.12□□□□□ -1.75
RUFY4Q6ZNE9 RPL23AP14-201ENST00000468281 468 ntBASIC4.12□□□□□ -1.75
RUFY4Q6ZNE9 RPL32P34-201ENST00000486380 400 ntBASIC4.12□□□□□ -1.75
RUFY4Q6ZNE9 RPL23AP49-201ENST00000492925 468 ntBASIC4.12□□□□□ -1.75
RUFY4Q6ZNE9 AC074250.1-201ENST00000511117 192 ntBASIC4.12□□□□□ -1.75
RUFY4Q6ZNE9 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.12□□□□□ -1.75
RUFY4Q6ZNE9 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.12□□□□□ -1.75
RUFY4Q6ZNE9 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.12□□□□□ -1.75
RUFY4Q6ZNE9 AC090877.1-201ENST00000561418 344 ntBASIC4.12□□□□□ -1.75
RUFY4Q6ZNE9 AL137849.1-201ENST00000604767 169 ntBASIC4.12□□□□□ -1.75
RUFY4Q6ZNE9 U7.8-201ENST00000619968 63 ntBASIC4.12□□□□□ -1.75
RUFY4Q6ZNE9 AC006504.1-201ENST00000562493 3666 ntBASIC4.12□□□□□ -1.75
RUFY4Q6ZNE9 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RUFY4Q6ZNE9 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.12□□□□□ -1.75
RUFY4Q6ZNE9 RNU6-238P-201ENST00000363313 106 ntBASIC4.11□□□□□ -1.75
RUFY4Q6ZNE9 RNU6-898P-201ENST00000365627 104 ntBASIC4.11□□□□□ -1.75
RUFY4Q6ZNE9 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
RUFY4Q6ZNE9 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RUFY4Q6ZNE9 HLFP1-201ENST00000402375 499 ntBASIC4.11□□□□□ -1.75
RUFY4Q6ZNE9 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.11□□□□□ -1.75
RUFY4Q6ZNE9 AP000907.1-201ENST00000428428 510 ntBASIC4.11□□□□□ -1.75
RUFY4Q6ZNE9 AL513124.1-201ENST00000450410 614 ntBASIC4.11□□□□□ -1.75
RUFY4Q6ZNE9 RNU6-1143P-201ENST00000516125 104 ntBASIC4.11□□□□□ -1.75
RUFY4Q6ZNE9 CR383656.8-201ENST00000549046 145 ntBASIC4.11□□□□□ -1.75
RUFY4Q6ZNE9 HIGD1AP1-201ENST00000550979 275 ntBASIC4.11□□□□□ -1.75
RUFY4Q6ZNE9 MYL12BP1-201ENST00000569826 507 ntBASIC4.11□□□□□ -1.75
RUFY4Q6ZNE9 RPS29P30-201ENST00000600975 111 ntBASIC4.11□□□□□ -1.75
RUFY4Q6ZNE9 AL713922.2-201ENST00000619384 716 ntBASIC4.11□□□□□ -1.75
RUFY4Q6ZNE9 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.11□□□□□ -1.75
RUFY4Q6ZNE9 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
RUFY4Q6ZNE9 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
RUFY4Q6ZNE9 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.1□□□□□ -1.75
RUFY4Q6ZNE9 AF117829.1-206ENST00000621883 3802 ntBASIC4.1□□□□□ -1.75
RUFY4Q6ZNE9 CEP170P1-201ENST00000502249 4587 ntBASIC4.1□□□□□ -1.75
RUFY4Q6ZNE9 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RUFY4Q6ZNE9 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RUFY4Q6ZNE9 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RUFY4Q6ZNE9 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RUFY4Q6ZNE9 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RUFY4Q6ZNE9 Y_RNA.210-201ENST00000364161 110 ntBASIC4.1□□□□□ -1.75
RUFY4Q6ZNE9 MIR634-201ENST00000385208 97 ntBASIC4.1□□□□□ -1.75
RUFY4Q6ZNE9 MIR628-201ENST00000385229 95 ntBASIC4.1□□□□□ -1.75
RUFY4Q6ZNE9 Y_RNA.592-201ENST00000410274 109 ntBASIC4.1□□□□□ -1.75
RUFY4Q6ZNE9 RNA5SP494-201ENST00000410653 129 ntBASIC4.1□□□□□ -1.75
RUFY4Q6ZNE9 RNU6-1245P-201ENST00000411130 106 ntBASIC4.1□□□□□ -1.75
RUFY4Q6ZNE9 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC4.1□□□□□ -1.75
RUFY4Q6ZNE9 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC4.1□□□□□ -1.75
RUFY4Q6ZNE9 FCF1P4-201ENST00000448326 183 ntBASIC4.1□□□□□ -1.75
RUFY4Q6ZNE9 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.1□□□□□ -1.75
RUFY4Q6ZNE9 CYCSP35-201ENST00000451978 304 ntBASIC4.1□□□□□ -1.75
RUFY4Q6ZNE9 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC4.1□□□□□ -1.75
RUFY4Q6ZNE9 RNU7-175P-201ENST00000515915 61 ntBASIC4.1□□□□□ -1.75
RUFY4Q6ZNE9 MIR2355-201ENST00000517199 87 ntBASIC4.1□□□□□ -1.75
RUFY4Q6ZNE9 RNU6-794P-201ENST00000517261 64 ntBASIC4.1□□□□□ -1.75
RUFY4Q6ZNE9 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.1□□□□□ -1.75
RUFY4Q6ZNE9 AC007458.1-201ENST00000542812 373 ntBASIC4.1□□□□□ -1.75
RUFY4Q6ZNE9 MIR5195-201ENST00000583555 115 ntBASIC4.1□□□□□ -1.75
RUFY4Q6ZNE9 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.1□□□□□ -1.75
RUFY4Q6ZNE9 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
RUFY4Q6ZNE9 NAA50-211ENST00000630058 177 ntTSL 5 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 187.6 ms