Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 AP002392.1-201ENST00000537692 208 ntBASIC3.87□□□□□ -1.79
RNF111Q6ZNA4 MIR3133-201ENST00000583157 78 ntBASIC3.87□□□□□ -1.79
RNF111Q6ZNA4 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.87□□□□□ -1.79
RNF111Q6ZNA4 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.87□□□□□ -1.79
RNF111Q6ZNA4 U7.8-201ENST00000619968 63 ntBASIC3.87□□□□□ -1.79
RNF111Q6ZNA4 AC112200.1-201ENST00000625015 234 ntBASIC3.87□□□□□ -1.79
RNF111Q6ZNA4 AC118273.1-201ENST00000525324 3006 ntBASIC3.87□□□□□ -1.79
RNF111Q6ZNA4 IPO8P1-201ENST00000455509 3109 ntBASIC3.87□□□□□ -1.79
RNF111Q6ZNA4 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
RNF111Q6ZNA4 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.87□□□□□ -1.79
RNF111Q6ZNA4 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.87□□□□□ -1.79
RNF111Q6ZNA4 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RNF111Q6ZNA4 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.86□□□□□ -1.79
RNF111Q6ZNA4 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.86□□□□□ -1.79
RNF111Q6ZNA4 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
RNF111Q6ZNA4 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.86□□□□□ -1.79
RNF111Q6ZNA4 TNPO1P3-201ENST00000436471 2662 ntBASIC3.86□□□□□ -1.79
RNF111Q6ZNA4 RNU6-600P-201ENST00000362524 99 ntBASIC3.86□□□□□ -1.79
RNF111Q6ZNA4 RNU1-140P-201ENST00000365040 165 ntBASIC3.86□□□□□ -1.79
RNF111Q6ZNA4 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.86□□□□□ -1.79
RNF111Q6ZNA4 SNORA29-201ENST00000384183 140 ntBASIC3.86□□□□□ -1.79
RNF111Q6ZNA4 RNU1-139P-201ENST00000391307 165 ntBASIC3.86□□□□□ -1.79
RNF111Q6ZNA4 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.86□□□□□ -1.79
RNF111Q6ZNA4 AC091390.1-201ENST00000433904 331 ntBASIC3.86□□□□□ -1.79
RNF111Q6ZNA4 RPL23AP14-201ENST00000468281 468 ntBASIC3.86□□□□□ -1.79
RNF111Q6ZNA4 RN7SL604P-201ENST00000492589 296 ntBASIC3.86□□□□□ -1.79
RNF111Q6ZNA4 Vault.1-201ENST00000516474 102 ntBASIC3.86□□□□□ -1.79
RNF111Q6ZNA4 SNORA25.14-201ENST00000516481 132 ntBASIC3.86□□□□□ -1.79
RNF111Q6ZNA4 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.86□□□□□ -1.79
RNF111Q6ZNA4 ZNF192P1-203ENST00000565888 810 ntBASIC3.86□□□□□ -1.79
RNF111Q6ZNA4 AL590392.1-201ENST00000604960 446 ntBASIC3.86□□□□□ -1.79
RNF111Q6ZNA4 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RNF111Q6ZNA4 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.86□□□□□ -1.79
RNF111Q6ZNA4 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RNF111Q6ZNA4 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.86□□□□□ -1.79
RNF111Q6ZNA4 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RNF111Q6ZNA4 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.86□□□□□ -1.79
RNF111Q6ZNA4 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RNF111Q6ZNA4 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.86□□□□□ -1.79
RNF111Q6ZNA4 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.86□□□□□ -1.79
RNF111Q6ZNA4 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.85□□□□□ -1.79
RNF111Q6ZNA4 AL136964.1-201ENST00000622038 2990 ntBASIC3.85□□□□□ -1.79
RNF111Q6ZNA4 AL353743.1-202ENST00000431724 1695 ntBASIC3.85□□□□□ -1.79
RNF111Q6ZNA4 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.85□□□□□ -1.79
RNF111Q6ZNA4 SNORD56.1-201ENST00000362913 68 ntBASIC3.85□□□□□ -1.79
RNF111Q6ZNA4 RNU6-778P-201ENST00000363269 103 ntBASIC3.85□□□□□ -1.79
RNF111Q6ZNA4 Y_RNA.464-201ENST00000384282 110 ntBASIC3.85□□□□□ -1.79
RNF111Q6ZNA4 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.85□□□□□ -1.79
RNF111Q6ZNA4 AL500522.2-201ENST00000448562 343 ntBASIC3.85□□□□□ -1.79
RNF111Q6ZNA4 MTATP6P7-201ENST00000453315 681 ntBASIC3.85□□□□□ -1.79
RNF111Q6ZNA4 RPL29P14-201ENST00000495837 428 ntBASIC3.85□□□□□ -1.79
RNF111Q6ZNA4 RNU7-143P-201ENST00000516781 65 ntBASIC3.85□□□□□ -1.79
RNF111Q6ZNA4 AC087441.2-201ENST00000529141 262 ntBASIC3.85□□□□□ -1.79
RNF111Q6ZNA4 MIR5695-201ENST00000579717 85 ntBASIC3.85□□□□□ -1.79
RNF111Q6ZNA4 AC005255.1-201ENST00000593748 216 ntBASIC3.85□□□□□ -1.79
RNF111Q6ZNA4 AC010620.2-201ENST00000600135 313 ntBASIC3.85□□□□□ -1.79
RNF111Q6ZNA4 SNORD113-5-201ENST00000607261 78 ntBASIC3.85□□□□□ -1.79
RNF111Q6ZNA4 AC005296.1-201ENST00000616145 209 ntBASIC3.85□□□□□ -1.79
RNF111Q6ZNA4 AC024581.2-201ENST00000619986 252 ntBASIC3.85□□□□□ -1.79
RNF111Q6ZNA4 U2.21-201ENST00000637295 81 ntBASIC3.85□□□□□ -1.79
RNF111Q6ZNA4 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RNF111Q6ZNA4 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RNF111Q6ZNA4 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.85□□□□□ -1.79
RNF111Q6ZNA4 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.85□□□□□ -1.79
RNF111Q6ZNA4 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.84□□□□□ -1.79
RNF111Q6ZNA4 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RNF111Q6ZNA4 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RNF111Q6ZNA4 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.84□□□□□ -1.79
RNF111Q6ZNA4 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.84□□□□□ -1.79
RNF111Q6ZNA4 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.84□□□□□ -1.79
RNF111Q6ZNA4 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
RNF111Q6ZNA4 RNU6-740P-201ENST00000364734 105 ntBASIC3.84□□□□□ -1.79
RNF111Q6ZNA4 SNORD32A-201ENST00000364805 84 ntBASIC3.84□□□□□ -1.79
RNF111Q6ZNA4 RNU6-1279P-201ENST00000383917 103 ntBASIC3.84□□□□□ -1.79
RNF111Q6ZNA4 RNU1-73P-201ENST00000383971 164 ntBASIC3.84□□□□□ -1.79
RNF111Q6ZNA4 RNU6-217P-201ENST00000384164 104 ntBASIC3.84□□□□□ -1.79
RNF111Q6ZNA4 RNU6-662P-201ENST00000384253 104 ntBASIC3.84□□□□□ -1.79
RNF111Q6ZNA4 RNU6-378P-201ENST00000384324 107 ntBASIC3.84□□□□□ -1.79
RNF111Q6ZNA4 Y_RNA.504-201ENST00000384481 104 ntBASIC3.84□□□□□ -1.79
RNF111Q6ZNA4 MIR487A-201ENST00000385009 80 ntBASIC3.84□□□□□ -1.79
RNF111Q6ZNA4 RNA5SP213-201ENST00000391031 106 ntBASIC3.84□□□□□ -1.79
RNF111Q6ZNA4 COX6CP10-201ENST00000416832 224 ntBASIC3.84□□□□□ -1.79
RNF111Q6ZNA4 HMGN2P30-201ENST00000423237 256 ntBASIC3.84□□□□□ -1.79
RNF111Q6ZNA4 WARS2P1-201ENST00000429678 537 ntBASIC3.84□□□□□ -1.79
RNF111Q6ZNA4 NDUFB4P6-201ENST00000436819 366 ntBASIC3.84□□□□□ -1.79
RNF111Q6ZNA4 AC006011.1-201ENST00000442758 349 ntBASIC3.84□□□□□ -1.79
RNF111Q6ZNA4 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.84□□□□□ -1.79
RNF111Q6ZNA4 RNU7-120P-201ENST00000459334 63 ntBASIC3.84□□□□□ -1.79
RNF111Q6ZNA4 RPL30P5-201ENST00000494923 336 ntBASIC3.84□□□□□ -1.79
RNF111Q6ZNA4 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.84□□□□□ -1.79
RNF111Q6ZNA4 SEPT14P8-201ENST00000508026 178 ntBASIC3.84□□□□□ -1.79
RNF111Q6ZNA4 RNU7-110P-201ENST00000516891 62 ntBASIC3.84□□□□□ -1.79
RNF111Q6ZNA4 RNU2-31P-201ENST00000516954 155 ntBASIC3.84□□□□□ -1.79
RNF111Q6ZNA4 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.84□□□□□ -1.79
RNF111Q6ZNA4 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.84□□□□□ -1.79
RNF111Q6ZNA4 HSPE1P5-201ENST00000561489 272 ntBASIC3.84□□□□□ -1.79
RNF111Q6ZNA4 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.84□□□□□ -1.79
RNF111Q6ZNA4 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.84□□□□□ -1.79
RNF111Q6ZNA4 AC136624.4-201ENST00000573044 370 ntBASIC3.84□□□□□ -1.79
RNF111Q6ZNA4 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms