Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.12□□□□□ -1.91
SYNE3Q6ZMZ3 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.12□□□□□ -1.91
SYNE3Q6ZMZ3 RNU6-942P-201ENST00000363002 107 ntBASIC3.12□□□□□ -1.91
SYNE3Q6ZMZ3 VTRNA1-1-201ENST00000363120 99 ntBASIC3.12□□□□□ -1.91
SYNE3Q6ZMZ3 RNU6-254P-201ENST00000363377 107 ntBASIC3.12□□□□□ -1.91
SYNE3Q6ZMZ3 Y_RNA.160-201ENST00000363677 92 ntBASIC3.12□□□□□ -1.91
SYNE3Q6ZMZ3 SNORD113-7-201ENST00000363762 77 ntBASIC3.12□□□□□ -1.91
SYNE3Q6ZMZ3 SNORA80A-201ENST00000363922 136 ntBASIC3.12□□□□□ -1.91
SYNE3Q6ZMZ3 RNA5SP139-201ENST00000364340 117 ntBASIC3.12□□□□□ -1.91
SYNE3Q6ZMZ3 AL360182.1-201ENST00000397433 468 ntBASIC3.12□□□□□ -1.91
SYNE3Q6ZMZ3 AC096649.2-201ENST00000416186 393 ntBASIC3.12□□□□□ -1.91
SYNE3Q6ZMZ3 AL096701.2-201ENST00000416920 238 ntBASIC3.12□□□□□ -1.91
SYNE3Q6ZMZ3 AC016831.2-201ENST00000417179 352 ntBASIC3.12□□□□□ -1.91
SYNE3Q6ZMZ3 MTND4LP11-201ENST00000422184 280 ntBASIC3.12□□□□□ -1.91
SYNE3Q6ZMZ3 MRPL50P4-201ENST00000446432 475 ntBASIC3.12□□□□□ -1.91
SYNE3Q6ZMZ3 BTF3P15-201ENST00000455606 336 ntBASIC3.12□□□□□ -1.91
SYNE3Q6ZMZ3 RNU7-138P-201ENST00000459479 64 ntBASIC3.12□□□□□ -1.91
SYNE3Q6ZMZ3 RPS27AP9-201ENST00000477681 438 ntBASIC3.12□□□□□ -1.91
SYNE3Q6ZMZ3 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.12□□□□□ -1.91
SYNE3Q6ZMZ3 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.12□□□□□ -1.91
SYNE3Q6ZMZ3 ELOCP31-201ENST00000540463 467 ntBASIC3.12□□□□□ -1.91
SYNE3Q6ZMZ3 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
SYNE3Q6ZMZ3 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.12□□□□□ -1.91
SYNE3Q6ZMZ3 MIR548S-201ENST00000581352 82 ntBASIC3.12□□□□□ -1.91
SYNE3Q6ZMZ3 AP000787.2-201ENST00000604432 568 ntBASIC3.12□□□□□ -1.91
SYNE3Q6ZMZ3 AL137843.1-201ENST00000605078 385 ntBASIC3.12□□□□□ -1.91
SYNE3Q6ZMZ3 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SYNE3Q6ZMZ3 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
SYNE3Q6ZMZ3 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.12□□□□□ -1.91
SYNE3Q6ZMZ3 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.12□□□□□ -1.91
SYNE3Q6ZMZ3 AC100810.6-201ENST00000638068 285 ntBASIC3.12□□□□□ -1.91
SYNE3Q6ZMZ3 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SYNE3Q6ZMZ3 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.11□□□□□ -1.91
SYNE3Q6ZMZ3 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.11□□□□□ -1.91
SYNE3Q6ZMZ3 Y_RNA.135-201ENST00000363439 95 ntBASIC3.11□□□□□ -1.91
SYNE3Q6ZMZ3 RNU1-100P-201ENST00000365255 165 ntBASIC3.11□□□□□ -1.91
SYNE3Q6ZMZ3 RNU6-898P-201ENST00000365627 104 ntBASIC3.11□□□□□ -1.91
SYNE3Q6ZMZ3 RNU6-876P-201ENST00000391295 104 ntBASIC3.11□□□□□ -1.91
SYNE3Q6ZMZ3 MTND3P10-201ENST00000450967 341 ntBASIC3.11□□□□□ -1.91
SYNE3Q6ZMZ3 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.11□□□□□ -1.91
SYNE3Q6ZMZ3 AC013470.1-201ENST00000453438 462 ntBASIC3.11□□□□□ -1.91
SYNE3Q6ZMZ3 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.11□□□□□ -1.91
SYNE3Q6ZMZ3 AIG1P1-201ENST00000503376 148 ntBASIC3.11□□□□□ -1.91
SYNE3Q6ZMZ3 AC113155.1-201ENST00000511141 769 ntBASIC3.11□□□□□ -1.91
SYNE3Q6ZMZ3 AC096725.1-201ENST00000514266 313 ntBASIC3.11□□□□□ -1.91
SYNE3Q6ZMZ3 AC046134.1-201ENST00000514454 666 ntBASIC3.11□□□□□ -1.91
SYNE3Q6ZMZ3 RN7SKP132-201ENST00000516001 208 ntBASIC3.11□□□□□ -1.91
SYNE3Q6ZMZ3 RNU6-864P-201ENST00000516256 108 ntBASIC3.11□□□□□ -1.91
SYNE3Q6ZMZ3 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SYNE3Q6ZMZ3 AP004607.1-201ENST00000524456 203 ntBASIC3.11□□□□□ -1.91
SYNE3Q6ZMZ3 AC087241.2-201ENST00000535801 324 ntBASIC3.11□□□□□ -1.91
SYNE3Q6ZMZ3 AC123912.5-201ENST00000605470 343 ntBASIC3.11□□□□□ -1.91
SYNE3Q6ZMZ3 Z82195.2-201ENST00000612348 18351 ntBASIC3.11□□□□□ -1.91
SYNE3Q6ZMZ3 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
SYNE3Q6ZMZ3 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.11□□□□□ -1.91
SYNE3Q6ZMZ3 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
SYNE3Q6ZMZ3 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.11□□□□□ -1.91
SYNE3Q6ZMZ3 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SYNE3Q6ZMZ3 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SYNE3Q6ZMZ3 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.1□□□□□ -1.91
SYNE3Q6ZMZ3 RNU6-750P-201ENST00000390946 107 ntBASIC3.1□□□□□ -1.91
SYNE3Q6ZMZ3 U3.26-201ENST00000391236 204 ntBASIC3.1□□□□□ -1.91
SYNE3Q6ZMZ3 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.1□□□□□ -1.91
SYNE3Q6ZMZ3 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.1□□□□□ -1.91
SYNE3Q6ZMZ3 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.1□□□□□ -1.91
SYNE3Q6ZMZ3 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.1□□□□□ -1.91
SYNE3Q6ZMZ3 SNORD109B-201ENST00000458961 67 ntBASIC3.1□□□□□ -1.91
SYNE3Q6ZMZ3 SNORD109A-201ENST00000459128 67 ntBASIC3.1□□□□□ -1.91
SYNE3Q6ZMZ3 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.1□□□□□ -1.91
SYNE3Q6ZMZ3 AC096576.1-201ENST00000489014 359 ntBASIC3.1□□□□□ -1.91
SYNE3Q6ZMZ3 Y_RNA.687-201ENST00000516558 91 ntBASIC3.1□□□□□ -1.91
SYNE3Q6ZMZ3 AC087854.1-201ENST00000519706 414 ntBASIC3.1□□□□□ -1.91
SYNE3Q6ZMZ3 AC107953.1-201ENST00000522216 297 ntBASIC3.1□□□□□ -1.91
SYNE3Q6ZMZ3 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.1□□□□□ -1.91
SYNE3Q6ZMZ3 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.1□□□□□ -1.91
SYNE3Q6ZMZ3 AC025281.1-201ENST00000567026 265 ntBASIC3.1□□□□□ -1.91
SYNE3Q6ZMZ3 AC020895.1-201ENST00000595362 272 ntBASIC3.1□□□□□ -1.91
SYNE3Q6ZMZ3 AC009248.2-201ENST00000619826 254 ntBASIC3.1□□□□□ -1.91
SYNE3Q6ZMZ3 AC009033.1-201ENST00000624279 431 ntBASIC3.1□□□□□ -1.91
SYNE3Q6ZMZ3 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.91
SYNE3Q6ZMZ3 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SYNE3Q6ZMZ3 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SYNE3Q6ZMZ3 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SYNE3Q6ZMZ3 RNU6-859P-201ENST00000362728 107 ntBASIC3.09□□□□□ -1.91
SYNE3Q6ZMZ3 SNORD21-201ENST00000383953 95 ntBASIC3.09□□□□□ -1.91
SYNE3Q6ZMZ3 RNU6-831P-201ENST00000384548 107 ntBASIC3.09□□□□□ -1.91
SYNE3Q6ZMZ3 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.09□□□□□ -1.91
SYNE3Q6ZMZ3 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.09□□□□□ -1.91
SYNE3Q6ZMZ3 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.09□□□□□ -1.91
SYNE3Q6ZMZ3 HIGD1AP2-201ENST00000446367 280 ntBASIC3.09□□□□□ -1.91
SYNE3Q6ZMZ3 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.09□□□□□ -1.91
SYNE3Q6ZMZ3 PMCHL2-203ENST00000457791 237 ntBASIC3.09□□□□□ -1.91
SYNE3Q6ZMZ3 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.09□□□□□ -1.91
SYNE3Q6ZMZ3 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.09□□□□□ -1.91
SYNE3Q6ZMZ3 RN7SKP256-201ENST00000517201 314 ntBASIC3.09□□□□□ -1.91
SYNE3Q6ZMZ3 AP000889.2-201ENST00000532684 490 ntBASIC3.09□□□□□ -1.91
SYNE3Q6ZMZ3 AL121579.1-201ENST00000555129 305 ntBASIC3.09□□□□□ -1.91
SYNE3Q6ZMZ3 AC100830.2-201ENST00000581636 240 ntBASIC3.09□□□□□ -1.91
SYNE3Q6ZMZ3 AL121757.2-201ENST00000611223 313 ntBASIC3.09□□□□□ -1.91
SYNE3Q6ZMZ3 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms