Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.99□□□□□ -1.93
ZNF549Q6P9A3 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.99□□□□□ -1.93
ZNF549Q6P9A3 Z69720.2-201ENST00000624755 279 ntBASIC2.99□□□□□ -1.93
ZNF549Q6P9A3 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.99□□□□□ -1.93
ZNF549Q6P9A3 AC008264.2-201ENST00000610193 3731 ntBASIC2.99□□□□□ -1.93
ZNF549Q6P9A3 AL035425.3-201ENST00000564206 4996 ntBASIC2.98□□□□□ -1.93
ZNF549Q6P9A3 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
ZNF549Q6P9A3 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
ZNF549Q6P9A3 MIR22-201ENST00000362190 85 ntBASIC2.98□□□□□ -1.93
ZNF549Q6P9A3 Y_RNA.2-201ENST00000362330 96 ntBASIC2.98□□□□□ -1.93
ZNF549Q6P9A3 RNU6-1167P-201ENST00000363227 94 ntBASIC2.98□□□□□ -1.93
ZNF549Q6P9A3 RNU6-384P-201ENST00000364900 104 ntBASIC2.98□□□□□ -1.93
ZNF549Q6P9A3 SET-203ENST00000372688 801 ntTSL 2 BASIC2.98□□□□□ -1.93
ZNF549Q6P9A3 Y_RNA.455-201ENST00000384230 98 ntBASIC2.98□□□□□ -1.93
ZNF549Q6P9A3 RNU6-174P-201ENST00000410406 106 ntBASIC2.98□□□□□ -1.93
ZNF549Q6P9A3 RNA5SP274-201ENST00000410484 108 ntBASIC2.98□□□□□ -1.93
ZNF549Q6P9A3 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.98□□□□□ -1.93
ZNF549Q6P9A3 AC108059.2-201ENST00000434626 151 ntBASIC2.98□□□□□ -1.93
ZNF549Q6P9A3 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.98□□□□□ -1.93
ZNF549Q6P9A3 RPS3AP12-201ENST00000443616 753 ntBASIC2.98□□□□□ -1.93
ZNF549Q6P9A3 BX510359.1-201ENST00000456973 237 ntBASIC2.98□□□□□ -1.93
ZNF549Q6P9A3 RPS23P3-201ENST00000470993 430 ntBASIC2.98□□□□□ -1.93
ZNF549Q6P9A3 AC117440.1-201ENST00000474107 571 ntBASIC2.98□□□□□ -1.93
ZNF549Q6P9A3 AC011005.2-201ENST00000487324 359 ntBASIC2.98□□□□□ -1.93
ZNF549Q6P9A3 RN7SL633P-201ENST00000488974 297 ntBASIC2.98□□□□□ -1.93
ZNF549Q6P9A3 AL049874.1-201ENST00000489560 388 ntBASIC2.98□□□□□ -1.93
ZNF549Q6P9A3 AC113155.1-201ENST00000511141 769 ntBASIC2.98□□□□□ -1.93
ZNF549Q6P9A3 AC008885.1-201ENST00000514930 301 ntBASIC2.98□□□□□ -1.93
ZNF549Q6P9A3 RNU6-1315P-201ENST00000517187 99 ntBASIC2.98□□□□□ -1.93
ZNF549Q6P9A3 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.98□□□□□ -1.93
ZNF549Q6P9A3 SUB1P3-201ENST00000564581 315 ntBASIC2.98□□□□□ -1.93
ZNF549Q6P9A3 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.98□□□□□ -1.93
ZNF549Q6P9A3 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.98□□□□□ -1.93
ZNF549Q6P9A3 MIR1273C-201ENST00000578669 77 ntBASIC2.98□□□□□ -1.93
ZNF549Q6P9A3 AC018889.1-201ENST00000605372 397 ntBASIC2.98□□□□□ -1.93
ZNF549Q6P9A3 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.98□□□□□ -1.93
ZNF549Q6P9A3 AC099778.2-201ENST00000610904 211 ntBASIC2.98□□□□□ -1.93
ZNF549Q6P9A3 XIST_intron.1-201ENST00000619444 68 ntBASIC2.98□□□□□ -1.93
ZNF549Q6P9A3 AL360181.4-201ENST00000621752 134 ntBASIC2.98□□□□□ -1.93
ZNF549Q6P9A3 AL512643.1-201ENST00000635735 524 ntBASIC2.98□□□□□ -1.93
ZNF549Q6P9A3 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.98□□□□□ -1.93
ZNF549Q6P9A3 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.98□□□□□ -1.93
ZNF549Q6P9A3 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
ZNF549Q6P9A3 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
ZNF549Q6P9A3 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
ZNF549Q6P9A3 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
ZNF549Q6P9A3 AC005592.1-201ENST00000566527 1640 ntBASIC2.97□□□□□ -1.93
ZNF549Q6P9A3 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.97□□□□□ -1.93
ZNF549Q6P9A3 SNORA51.4-201ENST00000364993 124 ntBASIC2.97□□□□□ -1.93
ZNF549Q6P9A3 Y_RNA.324-201ENST00000365165 102 ntBASIC2.97□□□□□ -1.93
ZNF549Q6P9A3 RNU6-596P-201ENST00000365395 98 ntBASIC2.97□□□□□ -1.93
ZNF549Q6P9A3 Y_RNA.485-201ENST00000384395 102 ntBASIC2.97□□□□□ -1.93
ZNF549Q6P9A3 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
ZNF549Q6P9A3 RN7SKP220-201ENST00000410611 288 ntBASIC2.97□□□□□ -1.93
ZNF549Q6P9A3 RN7SKP58-201ENST00000411010 305 ntBASIC2.97□□□□□ -1.93
ZNF549Q6P9A3 RNU6-293P-201ENST00000411259 106 ntBASIC2.97□□□□□ -1.93
ZNF549Q6P9A3 AL030996.1-201ENST00000411430 235 ntBASIC2.97□□□□□ -1.93
ZNF549Q6P9A3 AC096664.2-201ENST00000411843 406 ntBASIC2.97□□□□□ -1.93
ZNF549Q6P9A3 AL592148.1-201ENST00000413568 445 ntBASIC2.97□□□□□ -1.93
ZNF549Q6P9A3 BMS1P22-201ENST00000414726 313 ntBASIC2.97□□□□□ -1.93
ZNF549Q6P9A3 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.97□□□□□ -1.93
ZNF549Q6P9A3 MTCYBP10-201ENST00000424905 650 ntBASIC2.97□□□□□ -1.93
ZNF549Q6P9A3 AC093151.1-201ENST00000427711 313 ntBASIC2.97□□□□□ -1.93
ZNF549Q6P9A3 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.97□□□□□ -1.93
ZNF549Q6P9A3 AC009969.1-201ENST00000438726 172 ntBASIC2.97□□□□□ -1.93
ZNF549Q6P9A3 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.97□□□□□ -1.93
ZNF549Q6P9A3 AC011816.1-201ENST00000441346 546 ntBASIC2.97□□□□□ -1.93
ZNF549Q6P9A3 RPL37P4-201ENST00000448908 268 ntBASIC2.97□□□□□ -1.93
ZNF549Q6P9A3 CHEK2P4-201ENST00000450340 246 ntBASIC2.97□□□□□ -1.93
ZNF549Q6P9A3 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.97□□□□□ -1.93
ZNF549Q6P9A3 FABP5P15-201ENST00000453566 214 ntBASIC2.97□□□□□ -1.93
ZNF549Q6P9A3 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.97□□□□□ -1.93
ZNF549Q6P9A3 RN7SL807P-201ENST00000470923 297 ntBASIC2.97□□□□□ -1.93
ZNF549Q6P9A3 SNORD116.3-201ENST00000517176 78 ntBASIC2.97□□□□□ -1.93
ZNF549Q6P9A3 AC069113.1-201ENST00000517763 267 ntBASIC2.97□□□□□ -1.93
ZNF549Q6P9A3 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
ZNF549Q6P9A3 AL157871.3-201ENST00000557231 293 ntBASIC2.97□□□□□ -1.93
ZNF549Q6P9A3 MED28P6-201ENST00000558776 231 ntBASIC2.97□□□□□ -1.93
ZNF549Q6P9A3 AC092447.9-201ENST00000603395 144 ntBASIC2.97□□□□□ -1.93
ZNF549Q6P9A3 AL160281.1-201ENST00000605307 311 ntBASIC2.97□□□□□ -1.93
ZNF549Q6P9A3 AC090132.2-201ENST00000615881 347 ntBASIC2.97□□□□□ -1.93
ZNF549Q6P9A3 AL353743.1-202ENST00000431724 1695 ntBASIC2.97□□□□□ -1.93
ZNF549Q6P9A3 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
ZNF549Q6P9A3 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
ZNF549Q6P9A3 CDC27P3-201ENST00000635418 1910 ntBASIC2.97□□□□□ -1.93
ZNF549Q6P9A3 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.97□□□□□ -1.93
ZNF549Q6P9A3 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.97□□□□□ -1.93
ZNF549Q6P9A3 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.96□□□□□ -1.94
ZNF549Q6P9A3 AC091812.1-201ENST00000432235 1948 ntBASIC2.96□□□□□ -1.94
ZNF549Q6P9A3 DEFB108F-201ENST00000344638 222 ntBASIC2.96□□□□□ -1.94
ZNF549Q6P9A3 RNA5SP374-201ENST00000362939 125 ntBASIC2.96□□□□□ -1.94
ZNF549Q6P9A3 Y_RNA.149-201ENST00000363558 117 ntBASIC2.96□□□□□ -1.94
ZNF549Q6P9A3 Y_RNA.401-201ENST00000383965 117 ntBASIC2.96□□□□□ -1.94
ZNF549Q6P9A3 Y_RNA.428-201ENST00000384078 102 ntBASIC2.96□□□□□ -1.94
ZNF549Q6P9A3 RNU6-1179P-201ENST00000384667 107 ntBASIC2.96□□□□□ -1.94
ZNF549Q6P9A3 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.96□□□□□ -1.94
ZNF549Q6P9A3 BX276092.3-201ENST00000424182 230 ntBASIC2.96□□□□□ -1.94
ZNF549Q6P9A3 AC096644.2-201ENST00000429278 159 ntBASIC2.96□□□□□ -1.94
ZNF549Q6P9A3 RPL23AP83-201ENST00000434984 473 ntBASIC2.96□□□□□ -1.94
ZNF549Q6P9A3 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms