Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 AL138889.2-201ENST00000603883 242 ntBASIC2.12□□□□□ -2.07
ZNF544Q6NX49 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
ZNF544Q6NX49 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.12□□□□□ -2.07
ZNF544Q6NX49 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
ZNF544Q6NX49 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
ZNF544Q6NX49 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.11□□□□□ -2.07
ZNF544Q6NX49 Y_RNA.33-201ENST00000362591 102 ntBASIC2.11□□□□□ -2.07
ZNF544Q6NX49 RNU6-451P-201ENST00000362921 107 ntBASIC2.11□□□□□ -2.07
ZNF544Q6NX49 RNY3P3-201ENST00000363816 102 ntBASIC2.11□□□□□ -2.07
ZNF544Q6NX49 RNU6-1090P-201ENST00000364065 94 ntBASIC2.11□□□□□ -2.07
ZNF544Q6NX49 SNORA68.1-201ENST00000364537 132 ntBASIC2.11□□□□□ -2.07
ZNF544Q6NX49 Y_RNA.256-201ENST00000364594 104 ntBASIC2.11□□□□□ -2.07
ZNF544Q6NX49 RNU4-12P-201ENST00000365233 139 ntBASIC2.11□□□□□ -2.07
ZNF544Q6NX49 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
ZNF544Q6NX49 SNORA75B-201ENST00000384053 137 ntBASIC2.11□□□□□ -2.07
ZNF544Q6NX49 MIR514A2-201ENST00000385131 88 ntBASIC2.11□□□□□ -2.07
ZNF544Q6NX49 MIR514A3-201ENST00000385132 88 ntBASIC2.11□□□□□ -2.07
ZNF544Q6NX49 SNORA40C-201ENST00000391285 128 ntBASIC2.11□□□□□ -2.07
ZNF544Q6NX49 MIR1277-201ENST00000408536 78 ntBASIC2.11□□□□□ -2.07
ZNF544Q6NX49 RN7SKP284-201ENST00000411002 343 ntBASIC2.11□□□□□ -2.07
ZNF544Q6NX49 NDUFS5P4-201ENST00000412983 318 ntBASIC2.11□□□□□ -2.07
ZNF544Q6NX49 HMGN2P38-201ENST00000423806 265 ntBASIC2.11□□□□□ -2.07
ZNF544Q6NX49 AL669831.1-202ENST00000428504 417 ntBASIC2.11□□□□□ -2.07
ZNF544Q6NX49 HMGB1P9-201ENST00000429856 646 ntBASIC2.11□□□□□ -2.07
ZNF544Q6NX49 GTF2IP13-201ENST00000438487 386 ntBASIC2.11□□□□□ -2.07
ZNF544Q6NX49 CALM1P1-201ENST00000442082 433 ntBASIC2.11□□□□□ -2.07
ZNF544Q6NX49 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.11□□□□□ -2.07
ZNF544Q6NX49 NDUFB1P2-201ENST00000449477 176 ntBASIC2.11□□□□□ -2.07
ZNF544Q6NX49 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.11□□□□□ -2.07
ZNF544Q6NX49 RPL12P25-201ENST00000455592 494 ntBASIC2.11□□□□□ -2.07
ZNF544Q6NX49 TRBV1-201ENST00000476502 284 ntBASIC2.11□□□□□ -2.07
ZNF544Q6NX49 TRBV12-1-201ENST00000479785 344 ntBASIC2.11□□□□□ -2.07
ZNF544Q6NX49 AC022493.1-201ENST00000492984 337 ntBASIC2.11□□□□□ -2.07
ZNF544Q6NX49 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.11□□□□□ -2.07
ZNF544Q6NX49 AC104136.1-201ENST00000512969 394 ntBASIC2.11□□□□□ -2.07
ZNF544Q6NX49 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.11□□□□□ -2.07
ZNF544Q6NX49 LRRC34P2-201ENST00000514850 553 ntBASIC2.11□□□□□ -2.07
ZNF544Q6NX49 SNORD60.2-201ENST00000516883 86 ntBASIC2.11□□□□□ -2.07
ZNF544Q6NX49 AC025755.1-201ENST00000521306 278 ntBASIC2.11□□□□□ -2.07
ZNF544Q6NX49 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.11□□□□□ -2.07
ZNF544Q6NX49 AL137161.1-201ENST00000532231 390 ntBASIC2.11□□□□□ -2.07
ZNF544Q6NX49 AL391261.3-201ENST00000557194 520 ntBASIC2.11□□□□□ -2.07
ZNF544Q6NX49 AC068135.2-201ENST00000569293 1028 ntBASIC2.11□□□□□ -2.07
ZNF544Q6NX49 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.11□□□□□ -2.07
ZNF544Q6NX49 AL355598.1-201ENST00000604169 202 ntBASIC2.11□□□□□ -2.07
ZNF544Q6NX49 AC116312.1-201ENST00000606841 314 ntBASIC2.11□□□□□ -2.07
ZNF544Q6NX49 AC068944.2-201ENST00000610373 403 ntBASIC2.11□□□□□ -2.07
ZNF544Q6NX49 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.11□□□□□ -2.07
ZNF544Q6NX49 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
ZNF544Q6NX49 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.1□□□□□ -2.07
ZNF544Q6NX49 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.1□□□□□ -2.07
ZNF544Q6NX49 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.1□□□□□ -2.07
ZNF544Q6NX49 NACAP2-201ENST00000318548 624 ntBASIC2.1□□□□□ -2.07
ZNF544Q6NX49 RNU6-534P-201ENST00000364877 106 ntBASIC2.1□□□□□ -2.07
ZNF544Q6NX49 XGY1-201ENST00000381172 446 ntBASIC2.1□□□□□ -2.07
ZNF544Q6NX49 Y_RNA.399-201ENST00000383955 105 ntBASIC2.1□□□□□ -2.07
ZNF544Q6NX49 RNU1-73P-201ENST00000383971 164 ntBASIC2.1□□□□□ -2.07
ZNF544Q6NX49 SNORA70B-201ENST00000384210 135 ntBASIC2.1□□□□□ -2.07
ZNF544Q6NX49 RNU6-1127P-201ENST00000384580 107 ntBASIC2.1□□□□□ -2.07
ZNF544Q6NX49 SNORD115-47-201ENST00000391226 86 ntBASIC2.1□□□□□ -2.07
ZNF544Q6NX49 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.1□□□□□ -2.07
ZNF544Q6NX49 RNU4-53P-201ENST00000410828 140 ntBASIC2.1□□□□□ -2.07
ZNF544Q6NX49 RN7SKP192-201ENST00000411291 327 ntBASIC2.1□□□□□ -2.07
ZNF544Q6NX49 AC009963.1-201ENST00000417265 157 ntBASIC2.1□□□□□ -2.07
ZNF544Q6NX49 OOSP1P1-201ENST00000423265 274 ntBASIC2.1□□□□□ -2.07
ZNF544Q6NX49 AC098614.2-201ENST00000426040 255 ntBASIC2.1□□□□□ -2.07
ZNF544Q6NX49 GTF2IP20-201ENST00000431663 360 ntBASIC2.1□□□□□ -2.07
ZNF544Q6NX49 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.1□□□□□ -2.07
ZNF544Q6NX49 USP9YP28-201ENST00000435142 589 ntBASIC2.1□□□□□ -2.07
ZNF544Q6NX49 MTATP6P13-201ENST00000438531 667 ntBASIC2.1□□□□□ -2.07
ZNF544Q6NX49 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.1□□□□□ -2.07
ZNF544Q6NX49 WASF1P1-201ENST00000447560 1131 ntBASIC2.1□□□□□ -2.07
ZNF544Q6NX49 AL360271.2-201ENST00000447710 161 ntBASIC2.1□□□□□ -2.07
ZNF544Q6NX49 SNRPFP3-201ENST00000457792 225 ntBASIC2.1□□□□□ -2.07
ZNF544Q6NX49 RNU7-23P-201ENST00000459465 62 ntBASIC2.1□□□□□ -2.07
ZNF544Q6NX49 RN7SL636P-201ENST00000497504 294 ntBASIC2.1□□□□□ -2.07
ZNF544Q6NX49 RPL38P4-201ENST00000502376 214 ntBASIC2.1□□□□□ -2.07
ZNF544Q6NX49 GZMAP1-201ENST00000503054 631 ntBASIC2.1□□□□□ -2.07
ZNF544Q6NX49 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.1□□□□□ -2.07
ZNF544Q6NX49 AC091885.1-201ENST00000506658 268 ntBASIC2.1□□□□□ -2.07
ZNF544Q6NX49 AC234781.5-201ENST00000508429 271 ntBASIC2.1□□□□□ -2.07
ZNF544Q6NX49 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.1□□□□□ -2.07
ZNF544Q6NX49 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.1□□□□□ -2.07
ZNF544Q6NX49 AP000889.2-201ENST00000532684 490 ntBASIC2.1□□□□□ -2.07
ZNF544Q6NX49 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.1□□□□□ -2.07
ZNF544Q6NX49 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.1□□□□□ -2.07
ZNF544Q6NX49 SNORA59B-202ENST00000578183 701 ntBASIC2.1□□□□□ -2.07
ZNF544Q6NX49 MIR548AC-201ENST00000585049 88 ntBASIC2.1□□□□□ -2.07
ZNF544Q6NX49 AL670379.4-201ENST00000605279 254 ntBASIC2.1□□□□□ -2.07
ZNF544Q6NX49 AL158032.1-201ENST00000605401 106 ntBASIC2.1□□□□□ -2.07
ZNF544Q6NX49 AL121917.1-203ENST00000605534 577 ntBASIC2.1□□□□□ -2.07
ZNF544Q6NX49 AC104458.1-201ENST00000608243 463 ntBASIC2.1□□□□□ -2.07
ZNF544Q6NX49 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.1□□□□□ -2.07
ZNF544Q6NX49 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
ZNF544Q6NX49 DISC2.1-201ENST00000612827 205 ntBASIC2.1□□□□□ -2.07
ZNF544Q6NX49 AC007014.2-201ENST00000615581 479 ntBASIC2.1□□□□□ -2.07
ZNF544Q6NX49 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.1□□□□□ -2.07
ZNF544Q6NX49 YWHAEP7-203ENST00000622054 312 ntBASIC2.1□□□□□ -2.07
ZNF544Q6NX49 AC024940.5-201ENST00000622889 474 ntBASIC2.1□□□□□ -2.07
ZNF544Q6NX49 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms