Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
PDLIM3Q53GG5 VTRNA1-1-201ENST00000363120 99 ntBASIC2.5□□□□□ -2.01
PDLIM3Q53GG5 RNU6-876P-201ENST00000391295 104 ntBASIC2.5□□□□□ -2.01
PDLIM3Q53GG5 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
PDLIM3Q53GG5 HMGB1P31-201ENST00000437242 427 ntBASIC2.5□□□□□ -2.01
PDLIM3Q53GG5 AL603825.1-201ENST00000438481 80 ntBASIC2.5□□□□□ -2.01
PDLIM3Q53GG5 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.5□□□□□ -2.01
PDLIM3Q53GG5 AL031274.1-201ENST00000450334 232 ntBASIC2.5□□□□□ -2.01
PDLIM3Q53GG5 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.5□□□□□ -2.01
PDLIM3Q53GG5 AC117503.1-201ENST00000472241 394 ntBASIC2.5□□□□□ -2.01
PDLIM3Q53GG5 RPL23AP11-201ENST00000475260 469 ntBASIC2.5□□□□□ -2.01
PDLIM3Q53GG5 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.5□□□□□ -2.01
PDLIM3Q53GG5 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.5□□□□□ -2.01
PDLIM3Q53GG5 AC025465.4-201ENST00000513422 638 ntBASIC2.5□□□□□ -2.01
PDLIM3Q53GG5 BTF3P12-201ENST00000519620 469 ntBASIC2.5□□□□□ -2.01
PDLIM3Q53GG5 RPL7P20-201ENST00000520308 745 ntBASIC2.5□□□□□ -2.01
PDLIM3Q53GG5 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.5□□□□□ -2.01
PDLIM3Q53GG5 RNU6-323P-201ENST00000521915 107 ntBASIC2.5□□□□□ -2.01
PDLIM3Q53GG5 LRRC37A5P-203ENST00000580181 585 ntBASIC2.5□□□□□ -2.01
PDLIM3Q53GG5 CTHRC1P1-201ENST00000605383 469 ntBASIC2.5□□□□□ -2.01
PDLIM3Q53GG5 RNU6-85P-201ENST00000605989 107 ntBASIC2.5□□□□□ -2.01
PDLIM3Q53GG5 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.5□□□□□ -2.01
PDLIM3Q53GG5 MIR622-201ENST00000638396 96 ntBASIC2.5□□□□□ -2.01
PDLIM3Q53GG5 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.5□□□□□ -2.01
PDLIM3Q53GG5 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.5□□□□□ -2.01
PDLIM3Q53GG5 CASC19-280ENST00000642102 1351 ntBASIC2.49□□□□□ -2.01
PDLIM3Q53GG5 AL161431.1-201ENST00000618966 4205 ntBASIC2.49□□□□□ -2.01
PDLIM3Q53GG5 MIR514A2-201ENST00000385131 88 ntBASIC2.49□□□□□ -2.01
PDLIM3Q53GG5 MIR514A3-201ENST00000385132 88 ntBASIC2.49□□□□□ -2.01
PDLIM3Q53GG5 AL162578.1-201ENST00000406202 378 ntBASIC2.49□□□□□ -2.01
PDLIM3Q53GG5 FTH1P15-201ENST00000406984 280 ntBASIC2.49□□□□□ -2.01
PDLIM3Q53GG5 RPL30P16-201ENST00000419341 429 ntBASIC2.49□□□□□ -2.01
PDLIM3Q53GG5 SNRPEP10-201ENST00000420249 274 ntBASIC2.49□□□□□ -2.01
PDLIM3Q53GG5 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.49□□□□□ -2.01
PDLIM3Q53GG5 snoU13.23-201ENST00000458863 104 ntBASIC2.49□□□□□ -2.01
PDLIM3Q53GG5 RNU6-1208P-201ENST00000459588 107 ntBASIC2.49□□□□□ -2.01
PDLIM3Q53GG5 RN7SL863P-201ENST00000462370 296 ntBASIC2.49□□□□□ -2.01
PDLIM3Q53GG5 Y_RNA.654-201ENST00000497848 106 ntBASIC2.49□□□□□ -2.01
PDLIM3Q53GG5 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.49□□□□□ -2.01
PDLIM3Q53GG5 AC018710.1-201ENST00000506509 158 ntBASIC2.49□□□□□ -2.01
PDLIM3Q53GG5 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.49□□□□□ -2.01
PDLIM3Q53GG5 SNORA25.11-201ENST00000515935 105 ntBASIC2.49□□□□□ -2.01
PDLIM3Q53GG5 Y_RNA.665-201ENST00000516177 98 ntBASIC2.49□□□□□ -2.01
PDLIM3Q53GG5 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.49□□□□□ -2.01
PDLIM3Q53GG5 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.49□□□□□ -2.01
PDLIM3Q53GG5 AC023050.3-201ENST00000541142 333 ntBASIC2.49□□□□□ -2.01
PDLIM3Q53GG5 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.49□□□□□ -2.01
PDLIM3Q53GG5 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.49□□□□□ -2.01
PDLIM3Q53GG5 AC008121.1-201ENST00000603244 268 ntBASIC2.49□□□□□ -2.01
PDLIM3Q53GG5 AC093913.1-201ENST00000614178 329 ntBASIC2.49□□□□□ -2.01
PDLIM3Q53GG5 AC009033.1-201ENST00000624279 431 ntBASIC2.49□□□□□ -2.01
PDLIM3Q53GG5 MIR7515-201ENST00000637837 67 ntBASIC2.49□□□□□ -2.01
PDLIM3Q53GG5 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
PDLIM3Q53GG5 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
PDLIM3Q53GG5 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.48□□□□□ -2.01
PDLIM3Q53GG5 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
PDLIM3Q53GG5 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.48□□□□□ -2.01
PDLIM3Q53GG5 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.48□□□□□ -2.01
PDLIM3Q53GG5 RNU1-100P-201ENST00000365255 165 ntBASIC2.48□□□□□ -2.01
PDLIM3Q53GG5 Y_RNA.399-201ENST00000383955 105 ntBASIC2.48□□□□□ -2.01
PDLIM3Q53GG5 SNORA7.4-201ENST00000384249 137 ntBASIC2.48□□□□□ -2.01
PDLIM3Q53GG5 RNU6-72P-201ENST00000384285 79 ntBASIC2.48□□□□□ -2.01
PDLIM3Q53GG5 MIR518D-201ENST00000385014 87 ntBASIC2.48□□□□□ -2.01
PDLIM3Q53GG5 SNORD73A-201ENST00000386062 65 ntBASIC2.48□□□□□ -2.01
PDLIM3Q53GG5 MIR147B-201ENST00000390185 80 ntBASIC2.48□□□□□ -2.01
PDLIM3Q53GG5 U3.37-201ENST00000408528 213 ntBASIC2.48□□□□□ -2.01
PDLIM3Q53GG5 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.48□□□□□ -2.01
PDLIM3Q53GG5 RPLP0P7-201ENST00000416050 667 ntBASIC2.48□□□□□ -2.01
PDLIM3Q53GG5 NUP35P1-201ENST00000422734 947 ntBASIC2.48□□□□□ -2.01
PDLIM3Q53GG5 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.48□□□□□ -2.01
PDLIM3Q53GG5 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.48□□□□□ -2.01
PDLIM3Q53GG5 HIGD1AP2-201ENST00000446367 280 ntBASIC2.48□□□□□ -2.01
PDLIM3Q53GG5 AC012308.1-201ENST00000451232 178 ntBASIC2.48□□□□□ -2.01
PDLIM3Q53GG5 NIPA2P5-201ENST00000452282 464 ntBASIC2.48□□□□□ -2.01
PDLIM3Q53GG5 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.48□□□□□ -2.01
PDLIM3Q53GG5 HMGN2P26-201ENST00000463169 339 ntBASIC2.48□□□□□ -2.01
PDLIM3Q53GG5 RN7SL499P-201ENST00000481141 276 ntBASIC2.48□□□□□ -2.01
PDLIM3Q53GG5 GZMAP1-201ENST00000503054 631 ntBASIC2.48□□□□□ -2.01
PDLIM3Q53GG5 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
PDLIM3Q53GG5 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.48□□□□□ -2.01
PDLIM3Q53GG5 SNORA19.2-201ENST00000516013 114 ntBASIC2.48□□□□□ -2.01
PDLIM3Q53GG5 SNORA14.1-201ENST00000516113 141 ntBASIC2.48□□□□□ -2.01
PDLIM3Q53GG5 RNA5SP367-201ENST00000516557 118 ntBASIC2.48□□□□□ -2.01
PDLIM3Q53GG5 ACA59.2-201ENST00000517061 156 ntBASIC2.48□□□□□ -2.01
PDLIM3Q53GG5 SNORA25.17-201ENST00000517184 124 ntBASIC2.48□□□□□ -2.01
PDLIM3Q53GG5 SCARNA11.3-201ENST00000517276 130 ntBASIC2.48□□□□□ -2.01
PDLIM3Q53GG5 AC109329.2-201ENST00000519658 482 ntBASIC2.48□□□□□ -2.01
PDLIM3Q53GG5 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.48□□□□□ -2.01
PDLIM3Q53GG5 AC025423.5-201ENST00000550230 219 ntBASIC2.48□□□□□ -2.01
PDLIM3Q53GG5 AC090115.3-201ENST00000553218 849 ntBASIC2.48□□□□□ -2.01
PDLIM3Q53GG5 AL158827.2-201ENST00000602494 330 ntBASIC2.48□□□□□ -2.01
PDLIM3Q53GG5 AC087045.1-201ENST00000605856 382 ntBASIC2.48□□□□□ -2.01
PDLIM3Q53GG5 MIR6134-201ENST00000617606 109 ntBASIC2.48□□□□□ -2.01
PDLIM3Q53GG5 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.48□□□□□ -2.01
PDLIM3Q53GG5 AC097372.5-201ENST00000623665 376 ntBASIC2.48□□□□□ -2.01
PDLIM3Q53GG5 AL691447.3-201ENST00000635020 330 ntBASIC2.48□□□□□ -2.01
PDLIM3Q53GG5 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.48□□□□□ -2.01
PDLIM3Q53GG5 AC000403.1-201ENST00000613696 3585 ntBASIC2.48□□□□□ -2.01
PDLIM3Q53GG5 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
PDLIM3Q53GG5 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms