Protein–RNA interactions for Protein: Q3L8U1

CHD9, Chromodomain-helicase-DNA-binding protein 9, humanhuman

Predictions only

Length 2,897 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9Q3L8U1 RNU6-878P-201ENST00000384578 110 ntBASIC0.31□□□□□ -2.36
CHD9Q3L8U1 AC119751.3-201ENST00000399720 670 ntBASIC0.31□□□□□ -2.36
CHD9Q3L8U1 RNA5SP501-201ENST00000410990 112 ntBASIC0.31□□□□□ -2.36
CHD9Q3L8U1 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.31□□□□□ -2.36
CHD9Q3L8U1 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.31□□□□□ -2.36
CHD9Q3L8U1 AC013267.1-201ENST00000458227 267 ntBASIC0.31□□□□□ -2.36
CHD9Q3L8U1 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.31□□□□□ -2.36
CHD9Q3L8U1 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC0.31□□□□□ -2.36
CHD9Q3L8U1 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC0.31□□□□□ -2.36
CHD9Q3L8U1 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.31□□□□□ -2.36
CHD9Q3L8U1 RNA5SP404-201ENST00000517118 132 ntBASIC0.31□□□□□ -2.36
CHD9Q3L8U1 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC0.31□□□□□ -2.36
CHD9Q3L8U1 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC0.31□□□□□ -2.36
CHD9Q3L8U1 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.31□□□□□ -2.36
CHD9Q3L8U1 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.31□□□□□ -2.36
CHD9Q3L8U1 AC006518.2-201ENST00000542513 940 ntBASIC0.31□□□□□ -2.36
CHD9Q3L8U1 VN1R82P-201ENST00000601481 356 ntBASIC0.31□□□□□ -2.36
CHD9Q3L8U1 CLIC4P2-201ENST00000601934 717 ntBASIC0.31□□□□□ -2.36
CHD9Q3L8U1 AC079416.3-201ENST00000624479 549 ntBASIC0.31□□□□□ -2.36
CHD9Q3L8U1 FARSBP1-201ENST00000435808 1778 ntBASIC0.31□□□□□ -2.36
CHD9Q3L8U1 SEC63P2-201ENST00000503863 1939 ntBASIC0.31□□□□□ -2.36
CHD9Q3L8U1 DLEU2_6.3-201ENST00000340052 136 ntBASIC0.31□□□□□ -2.36
CHD9Q3L8U1 MIR597-201ENST00000384968 97 ntBASIC0.31□□□□□ -2.36
CHD9Q3L8U1 MIR10B-201ENST00000385011 110 ntBASIC0.31□□□□□ -2.36
CHD9Q3L8U1 MIR514A1-201ENST00000385133 98 ntBASIC0.31□□□□□ -2.36
CHD9Q3L8U1 RNU6-750P-201ENST00000390946 107 ntBASIC0.31□□□□□ -2.36
CHD9Q3L8U1 AL590383.1-201ENST00000428602 75 ntBASIC0.31□□□□□ -2.36
CHD9Q3L8U1 RPS25P9-201ENST00000435591 252 ntBASIC0.31□□□□□ -2.36
CHD9Q3L8U1 MTND2P21-201ENST00000436242 1042 ntBASIC0.31□□□□□ -2.36
CHD9Q3L8U1 RPS26P55-201ENST00000471178 356 ntBASIC0.31□□□□□ -2.36
CHD9Q3L8U1 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
CHD9Q3L8U1 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.31□□□□□ -2.36
CHD9Q3L8U1 AC124293.1-201ENST00000530034 493 ntBASIC0.31□□□□□ -2.36
CHD9Q3L8U1 AL590705.4-201ENST00000532209 134 ntBASIC0.31□□□□□ -2.36
CHD9Q3L8U1 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.31□□□□□ -2.36
CHD9Q3L8U1 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC0.31□□□□□ -2.36
CHD9Q3L8U1 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC0.31□□□□□ -2.36
CHD9Q3L8U1 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC0.31□□□□□ -2.36
CHD9Q3L8U1 AC091152.3-201ENST00000604227 325 ntBASIC0.31□□□□□ -2.36
CHD9Q3L8U1 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.31□□□□□ -2.36
CHD9Q3L8U1 DLEU2_6.2-201ENST00000620994 136 ntBASIC0.31□□□□□ -2.36
CHD9Q3L8U1 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
CHD9Q3L8U1 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
CHD9Q3L8U1 AL512637.2-201ENST00000431287 1256 ntBASIC0.3□□□□□ -2.36
CHD9Q3L8U1 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC0.3□□□□□ -2.36
CHD9Q3L8U1 MTCO1P57-201ENST00000432182 261 ntBASIC0.3□□□□□ -2.36
CHD9Q3L8U1 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.3□□□□□ -2.36
CHD9Q3L8U1 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.3□□□□□ -2.36
CHD9Q3L8U1 AL441985.1-201ENST00000457727 251 ntBASIC0.3□□□□□ -2.36
CHD9Q3L8U1 RPL31P3-201ENST00000458430 332 ntBASIC0.3□□□□□ -2.36
CHD9Q3L8U1 RNU6-775P-201ENST00000459318 96 ntBASIC0.3□□□□□ -2.36
CHD9Q3L8U1 AC034114.1-201ENST00000520293 285 ntBASIC0.3□□□□□ -2.36
CHD9Q3L8U1 AP003034.1-201ENST00000534621 422 ntBASIC0.3□□□□□ -2.36
CHD9Q3L8U1 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.3□□□□□ -2.36
CHD9Q3L8U1 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.3□□□□□ -2.36
CHD9Q3L8U1 AF129408.1-201ENST00000608767 431 ntBASIC0.3□□□□□ -2.36
CHD9Q3L8U1 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC0.3□□□□□ -2.36
CHD9Q3L8U1 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC0.3□□□□□ -2.36
CHD9Q3L8U1 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.3□□□□□ -2.36
CHD9Q3L8U1 MIR1283-2-201ENST00000408621 87 ntBASIC0.3□□□□□ -2.36
CHD9Q3L8U1 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.3□□□□□ -2.36
CHD9Q3L8U1 RPL23AP95-201ENST00000426806 265 ntBASIC0.3□□□□□ -2.36
CHD9Q3L8U1 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.3□□□□□ -2.36
CHD9Q3L8U1 MTND4P6-201ENST00000438297 472 ntBASIC0.3□□□□□ -2.36
CHD9Q3L8U1 AC002542.1-201ENST00000440683 193 ntBASIC0.3□□□□□ -2.36
CHD9Q3L8U1 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC0.3□□□□□ -2.36
CHD9Q3L8U1 AL157398.1-201ENST00000452981 186 ntBASIC0.3□□□□□ -2.36
CHD9Q3L8U1 OR2A41P-201ENST00000473586 105 ntBASIC0.3□□□□□ -2.36
CHD9Q3L8U1 MTND2P33-201ENST00000506452 1031 ntBASIC0.3□□□□□ -2.36
CHD9Q3L8U1 AC025465.3-201ENST00000510570 311 ntBASIC0.3□□□□□ -2.36
CHD9Q3L8U1 RNA5SP437-201ENST00000517249 129 ntBASIC0.3□□□□□ -2.36
CHD9Q3L8U1 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.3□□□□□ -2.36
CHD9Q3L8U1 HSPA8P13-201ENST00000523715 472 ntBASIC0.3□□□□□ -2.36
CHD9Q3L8U1 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.3□□□□□ -2.36
CHD9Q3L8U1 AC068790.6-201ENST00000602558 258 ntBASIC0.3□□□□□ -2.36
CHD9Q3L8U1 AL133445.2-201ENST00000611191 527 ntBASIC0.3□□□□□ -2.36
CHD9Q3L8U1 UBE2Q2P6-201ENST00000612666 153 ntBASIC0.3□□□□□ -2.36
CHD9Q3L8U1 AC022202.1-201ENST00000613515 211 ntBASIC0.3□□□□□ -2.36
CHD9Q3L8U1 SNORA25B-201ENST00000365507 128 ntBASIC0.29□□□□□ -2.36
CHD9Q3L8U1 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
CHD9Q3L8U1 RNU2-36P-201ENST00000410361 191 ntBASIC0.29□□□□□ -2.36
CHD9Q3L8U1 AC069282.1-201ENST00000411911 526 ntBASIC0.29□□□□□ -2.36
CHD9Q3L8U1 PPP1R11P2-201ENST00000423543 382 ntBASIC0.29□□□□□ -2.36
CHD9Q3L8U1 AC069257.2-201ENST00000441819 155 ntBASIC0.29□□□□□ -2.36
CHD9Q3L8U1 RAD1P2-201ENST00000446414 663 ntBASIC0.29□□□□□ -2.36
CHD9Q3L8U1 MTND3P4-201ENST00000453537 303 ntBASIC0.29□□□□□ -2.36
CHD9Q3L8U1 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC0.29□□□□□ -2.36
CHD9Q3L8U1 AKIRIN2P1-201ENST00000505898 352 ntBASIC0.29□□□□□ -2.36
CHD9Q3L8U1 BNIP3P27-201ENST00000599991 412 ntBASIC0.29□□□□□ -2.36
CHD9Q3L8U1 AC069304.2-201ENST00000605154 435 ntBASIC0.29□□□□□ -2.36
CHD9Q3L8U1 AC091946.2-201ENST00000606105 291 ntBASIC0.29□□□□□ -2.36
CHD9Q3L8U1 AC107075.1-201ENST00000613695 314 ntBASIC0.29□□□□□ -2.36
CHD9Q3L8U1 AC017037.3-201ENST00000625016 472 ntBASIC0.29□□□□□ -2.36
CHD9Q3L8U1 MIR424-201ENST00000362227 98 ntBASIC0.29□□□□□ -2.36
CHD9Q3L8U1 RNU6-944P-201ENST00000364023 107 ntBASIC0.29□□□□□ -2.36
CHD9Q3L8U1 MIR518D-201ENST00000385014 87 ntBASIC0.29□□□□□ -2.36
CHD9Q3L8U1 MIR1267-201ENST00000408723 78 ntBASIC0.29□□□□□ -2.36
CHD9Q3L8U1 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.29□□□□□ -2.36
CHD9Q3L8U1 AC008267.5-201ENST00000424928 265 ntBASIC0.29□□□□□ -2.36
CHD9Q3L8U1 MTCO1P31-201ENST00000506355 492 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms