Protein–RNA interactions for Protein: Q15428

SF3A2, Splicing factor 3A subunit 2, humanhuman

Known RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2Q15428 Y_RNA.51-201ENST00000362725 102 ntBASIC1.88□□□□□ -2.11
SF3A2Q15428 U3.4-201ENST00000363352 213 ntBASIC1.88□□□□□ -2.11
SF3A2Q15428 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
SF3A2Q15428 Y_RNA.436-201ENST00000384097 102 ntBASIC1.88□□□□□ -2.11
SF3A2Q15428 MIR17-201ENST00000385012 84 ntBASIC1.88□□□□□ -2.11
SF3A2Q15428 MIR301A-201ENST00000385261 86 ntBASIC1.88□□□□□ -2.11
SF3A2Q15428 RNU2-20P-201ENST00000410425 191 ntBASIC1.88□□□□□ -2.11
SF3A2Q15428 RNU2-63P-201ENST00000410792 194 ntBASIC1.88□□□□□ -2.11
SF3A2Q15428 RNU2-62P-201ENST00000410868 191 ntBASIC1.88□□□□□ -2.11
SF3A2Q15428 AL353621.1-201ENST00000418219 243 ntBASIC1.88□□□□□ -2.11
SF3A2Q15428 CYCSP46-201ENST00000423569 204 ntBASIC1.88□□□□□ -2.11
SF3A2Q15428 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.88□□□□□ -2.11
SF3A2Q15428 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.88□□□□□ -2.11
SF3A2Q15428 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.88□□□□□ -2.11
SF3A2Q15428 AL353706.1-201ENST00000436728 494 ntBASIC1.88□□□□□ -2.11
SF3A2Q15428 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.88□□□□□ -2.11
SF3A2Q15428 USP9YP8-201ENST00000441913 500 ntBASIC1.88□□□□□ -2.11
SF3A2Q15428 AL078601.1-201ENST00000444542 271 ntBASIC1.88□□□□□ -2.11
SF3A2Q15428 AL360221.1-201ENST00000445989 335 ntBASIC1.88□□□□□ -2.11
SF3A2Q15428 MTND1P29-201ENST00000448112 647 ntBASIC1.88□□□□□ -2.11
SF3A2Q15428 MTAPP1-201ENST00000489154 819 ntBASIC1.88□□□□□ -2.11
SF3A2Q15428 AC018437.1-201ENST00000492214 406 ntBASIC1.88□□□□□ -2.11
SF3A2Q15428 AC091965.2-201ENST00000512324 613 ntBASIC1.88□□□□□ -2.11
SF3A2Q15428 RNU6-1315P-201ENST00000517187 99 ntBASIC1.88□□□□□ -2.11
SF3A2Q15428 AP003122.4-201ENST00000530980 758 ntBASIC1.88□□□□□ -2.11
SF3A2Q15428 AC118273.2-201ENST00000532092 465 ntBASIC1.88□□□□□ -2.11
SF3A2Q15428 AC079598.5-201ENST00000547460 117 ntBASIC1.88□□□□□ -2.11
SF3A2Q15428 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.88□□□□□ -2.11
SF3A2Q15428 AC025165.5-201ENST00000602802 578 ntBASIC1.88□□□□□ -2.11
SF3A2Q15428 AC009314.1-201ENST00000603871 304 ntBASIC1.88□□□□□ -2.11
SF3A2Q15428 AL355297.2-201ENST00000604792 129 ntBASIC1.88□□□□□ -2.11
SF3A2Q15428 AC012360.2-201ENST00000609349 391 ntBASIC1.88□□□□□ -2.11
SF3A2Q15428 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.88□□□□□ -2.11
SF3A2Q15428 AC139792.2-201ENST00000624218 587 ntBASIC1.88□□□□□ -2.11
SF3A2Q15428 WWP1P1-201ENST00000466609 2769 ntBASIC1.88□□□□□ -2.11
SF3A2Q15428 AL390237.1-201ENST00000404226 1415 ntBASIC1.88□□□□□ -2.11
SF3A2Q15428 TEX21P-201ENST00000447107 1476 ntBASIC1.88□□□□□ -2.11
SF3A2Q15428 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SF3A2Q15428 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.87□□□□□ -2.11
SF3A2Q15428 Y_RNA.201-201ENST00000364052 96 ntBASIC1.87□□□□□ -2.11
SF3A2Q15428 RNU5E-6P-201ENST00000365574 115 ntBASIC1.87□□□□□ -2.11
SF3A2Q15428 SNORA40C-201ENST00000391285 128 ntBASIC1.87□□□□□ -2.11
SF3A2Q15428 SUMO2P12-201ENST00000405924 140 ntBASIC1.87□□□□□ -2.11
SF3A2Q15428 RNU6-1025P-201ENST00000410629 104 ntBASIC1.87□□□□□ -2.11
SF3A2Q15428 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.87□□□□□ -2.11
SF3A2Q15428 AL356583.2-201ENST00000426536 280 ntBASIC1.87□□□□□ -2.11
SF3A2Q15428 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.87□□□□□ -2.11
SF3A2Q15428 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.87□□□□□ -2.11
SF3A2Q15428 AC016691.1-201ENST00000441321 413 ntBASIC1.87□□□□□ -2.11
SF3A2Q15428 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.87□□□□□ -2.11
SF3A2Q15428 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.87□□□□□ -2.11
SF3A2Q15428 AC093899.1-201ENST00000457984 376 ntBASIC1.87□□□□□ -2.11
SF3A2Q15428 RN7SL274P-201ENST00000492268 272 ntBASIC1.87□□□□□ -2.11
SF3A2Q15428 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.87□□□□□ -2.11
SF3A2Q15428 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.87□□□□□ -2.11
SF3A2Q15428 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.87□□□□□ -2.11
SF3A2Q15428 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.87□□□□□ -2.11
SF3A2Q15428 Y_RNA.695-201ENST00000516715 107 ntBASIC1.87□□□□□ -2.11
SF3A2Q15428 RNU6-677P-201ENST00000516914 101 ntBASIC1.87□□□□□ -2.11
SF3A2Q15428 RNU6-1092P-201ENST00000516955 87 ntBASIC1.87□□□□□ -2.11
SF3A2Q15428 RNA5SP337-201ENST00000517007 109 ntBASIC1.87□□□□□ -2.11
SF3A2Q15428 RNA5SP490-201ENST00000517141 136 ntBASIC1.87□□□□□ -2.11
SF3A2Q15428 SNORA31.25-201ENST00000517242 134 ntBASIC1.87□□□□□ -2.11
SF3A2Q15428 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.87□□□□□ -2.11
SF3A2Q15428 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.87□□□□□ -2.11
SF3A2Q15428 AC012414.6-201ENST00000568241 401 ntBASIC1.87□□□□□ -2.11
SF3A2Q15428 HMGN1P30-201ENST00000589286 268 ntBASIC1.87□□□□□ -2.11
SF3A2Q15428 AC119751.7-201ENST00000600494 245 ntBASIC1.87□□□□□ -2.11
SF3A2Q15428 MIR5739-201ENST00000619803 80 ntBASIC1.87□□□□□ -2.11
SF3A2Q15428 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.87□□□□□ -2.11
SF3A2Q15428 AL359851.1-201ENST00000569460 4997 ntBASIC1.87□□□□□ -2.11
SF3A2Q15428 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SF3A2Q15428 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SF3A2Q15428 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SF3A2Q15428 RNU5E-5P-201ENST00000365379 116 ntBASIC1.86□□□□□ -2.11
SF3A2Q15428 RNU6-39P-201ENST00000384344 107 ntBASIC1.86□□□□□ -2.11
SF3A2Q15428 RNU6-166P-201ENST00000384371 107 ntBASIC1.86□□□□□ -2.11
SF3A2Q15428 MIR9-3-201ENST00000385084 90 ntBASIC1.86□□□□□ -2.11
SF3A2Q15428 SNORA46.1-201ENST00000391069 153 ntBASIC1.86□□□□□ -2.11
SF3A2Q15428 CIR1P3-201ENST00000405137 479 ntBASIC1.86□□□□□ -2.11
SF3A2Q15428 RN7SKP142-201ENST00000411236 328 ntBASIC1.86□□□□□ -2.11
SF3A2Q15428 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.86□□□□□ -2.11
SF3A2Q15428 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.86□□□□□ -2.11
SF3A2Q15428 AL589872.1-201ENST00000426602 288 ntBASIC1.86□□□□□ -2.11
SF3A2Q15428 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.86□□□□□ -2.11
SF3A2Q15428 AL591704.1-201ENST00000432574 275 ntBASIC1.86□□□□□ -2.11
SF3A2Q15428 MTCO2P18-201ENST00000457151 658 ntBASIC1.86□□□□□ -2.11
SF3A2Q15428 RNA5SP233-201ENST00000459153 113 ntBASIC1.86□□□□□ -2.11
SF3A2Q15428 AC055731.1-201ENST00000474387 401 ntBASIC1.86□□□□□ -2.11
SF3A2Q15428 RAP1BP2-201ENST00000478270 544 ntBASIC1.86□□□□□ -2.11
SF3A2Q15428 AP000797.1-201ENST00000478870 387 ntBASIC1.86□□□□□ -2.11
SF3A2Q15428 AC112204.1-201ENST00000502591 103 ntBASIC1.86□□□□□ -2.11
SF3A2Q15428 AC010587.1-201ENST00000505809 469 ntBASIC1.86□□□□□ -2.11
SF3A2Q15428 AC010424.1-201ENST00000506336 297 ntBASIC1.86□□□□□ -2.11
SF3A2Q15428 AC109927.2-201ENST00000506416 303 ntBASIC1.86□□□□□ -2.11
SF3A2Q15428 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.86□□□□□ -2.11
SF3A2Q15428 RNU6-1220P-201ENST00000517126 108 ntBASIC1.86□□□□□ -2.11
SF3A2Q15428 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.86□□□□□ -2.11
SF3A2Q15428 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SF3A2Q15428 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms