Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 AC103988.1-201ENST00000566382 2177 ntBASIC3.58□□□□□ -1.84
SF3B3Q15393 RNU5A-1-201ENST00000362698 116 ntBASIC3.58□□□□□ -1.84
SF3B3Q15393 RNA5SP126-201ENST00000365092 109 ntBASIC3.58□□□□□ -1.84
SF3B3Q15393 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SF3B3Q15393 RNA5SP274-201ENST00000410484 108 ntBASIC3.58□□□□□ -1.84
SF3B3Q15393 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.58□□□□□ -1.84
SF3B3Q15393 AC018865.2-201ENST00000423631 129 ntBASIC3.58□□□□□ -1.84
SF3B3Q15393 AC063976.3-201ENST00000426849 329 ntBASIC3.58□□□□□ -1.84
SF3B3Q15393 SUMO2P6-201ENST00000505273 288 ntBASIC3.58□□□□□ -1.84
SF3B3Q15393 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SF3B3Q15393 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.58□□□□□ -1.84
SF3B3Q15393 RNU6-1046P-201ENST00000516538 107 ntBASIC3.58□□□□□ -1.84
SF3B3Q15393 SNORA64.4-201ENST00000516632 81 ntBASIC3.58□□□□□ -1.84
SF3B3Q15393 Y_RNA.708-201ENST00000516950 96 ntBASIC3.58□□□□□ -1.84
SF3B3Q15393 RNU6-988P-201ENST00000519081 107 ntBASIC3.58□□□□□ -1.84
SF3B3Q15393 AC025423.5-201ENST00000550230 219 ntBASIC3.58□□□□□ -1.84
SF3B3Q15393 AC026371.1-201ENST00000551867 419 ntBASIC3.58□□□□□ -1.84
SF3B3Q15393 DNAJC8P1-201ENST00000554535 372 ntBASIC3.58□□□□□ -1.84
SF3B3Q15393 MIR5692A1-201ENST00000580523 69 ntBASIC3.58□□□□□ -1.84
SF3B3Q15393 AC007938.3-201ENST00000604965 623 ntBASIC3.58□□□□□ -1.84
SF3B3Q15393 AC018462.2-201ENST00000605375 395 ntBASIC3.58□□□□□ -1.84
SF3B3Q15393 AC009229.3-201ENST00000608056 282 ntBASIC3.58□□□□□ -1.84
SF3B3Q15393 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.58□□□□□ -1.84
SF3B3Q15393 AL360181.4-201ENST00000621752 134 ntBASIC3.58□□□□□ -1.84
SF3B3Q15393 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
SF3B3Q15393 SNORD56.3-201ENST00000363507 71 ntBASIC3.57□□□□□ -1.84
SF3B3Q15393 Y_RNA.148-201ENST00000363557 117 ntBASIC3.57□□□□□ -1.84
SF3B3Q15393 RNU6-173P-201ENST00000364215 104 ntBASIC3.57□□□□□ -1.84
SF3B3Q15393 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SF3B3Q15393 Y_RNA.404-201ENST00000383978 102 ntBASIC3.57□□□□□ -1.84
SF3B3Q15393 SNORA75B-201ENST00000384053 137 ntBASIC3.57□□□□□ -1.84
SF3B3Q15393 MIR578-201ENST00000384828 96 ntBASIC3.57□□□□□ -1.84
SF3B3Q15393 MIR514A1-201ENST00000385133 98 ntBASIC3.57□□□□□ -1.84
SF3B3Q15393 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
SF3B3Q15393 U3.42-201ENST00000408746 214 ntBASIC3.57□□□□□ -1.84
SF3B3Q15393 RNU6-1050P-201ENST00000410388 107 ntBASIC3.57□□□□□ -1.84
SF3B3Q15393 AC113618.1-201ENST00000416747 285 ntBASIC3.57□□□□□ -1.84
SF3B3Q15393 RPS15AP6-201ENST00000420703 385 ntBASIC3.57□□□□□ -1.84
SF3B3Q15393 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.57□□□□□ -1.84
SF3B3Q15393 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.57□□□□□ -1.84
SF3B3Q15393 AL035666.1-201ENST00000446195 348 ntBASIC3.57□□□□□ -1.84
SF3B3Q15393 MIR2053-201ENST00000459295 91 ntBASIC3.57□□□□□ -1.84
SF3B3Q15393 AC091179.1-201ENST00000461606 579 ntBASIC3.57□□□□□ -1.84
SF3B3Q15393 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.57□□□□□ -1.84
SF3B3Q15393 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.57□□□□□ -1.84
SF3B3Q15393 MTND3P25-201ENST00000509243 135 ntBASIC3.57□□□□□ -1.84
SF3B3Q15393 PTP4A1P4-201ENST00000512479 322 ntBASIC3.57□□□□□ -1.84
SF3B3Q15393 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.57□□□□□ -1.84
SF3B3Q15393 Y_RNA.670-201ENST00000516255 105 ntBASIC3.57□□□□□ -1.84
SF3B3Q15393 RNU1-54P-201ENST00000517181 120 ntBASIC3.57□□□□□ -1.84
SF3B3Q15393 RN7SKP295-201ENST00000517264 153 ntBASIC3.57□□□□□ -1.84
SF3B3Q15393 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.57□□□□□ -1.84
SF3B3Q15393 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.57□□□□□ -1.84
SF3B3Q15393 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.57□□□□□ -1.84
SF3B3Q15393 LRRC37A5P-203ENST00000580181 585 ntBASIC3.57□□□□□ -1.84
SF3B3Q15393 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SF3B3Q15393 AL355810.1-201ENST00000614629 552 ntBASIC3.57□□□□□ -1.84
SF3B3Q15393 AC002076.2-201ENST00000617362 122 ntBASIC3.57□□□□□ -1.84
SF3B3Q15393 MAPK10-322ENST00000641485 4530 ntBASIC3.56□□□□□ -1.84
SF3B3Q15393 AP003122.5-201ENST00000527668 3766 ntBASIC3.56□□□□□ -1.84
SF3B3Q15393 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SF3B3Q15393 MTND5P16-201ENST00000460269 1703 ntBASIC3.56□□□□□ -1.84
SF3B3Q15393 UBE2L2-201ENST00000254302 429 ntBASIC3.56□□□□□ -1.84
SF3B3Q15393 AC138393.1-203ENST00000327086 343 ntBASIC3.56□□□□□ -1.84
SF3B3Q15393 DEFB108F-201ENST00000344638 222 ntBASIC3.56□□□□□ -1.84
SF3B3Q15393 SNORD62.1-201ENST00000362541 86 ntBASIC3.56□□□□□ -1.84
SF3B3Q15393 RNU6-890P-201ENST00000384121 107 ntBASIC3.56□□□□□ -1.84
SF3B3Q15393 RNU6-214P-201ENST00000384130 107 ntBASIC3.56□□□□□ -1.84
SF3B3Q15393 Y_RNA.459-201ENST00000384251 102 ntBASIC3.56□□□□□ -1.84
SF3B3Q15393 RNU6-301P-201ENST00000384277 107 ntBASIC3.56□□□□□ -1.84
SF3B3Q15393 Y_RNA.594-201ENST00000410373 140 ntBASIC3.56□□□□□ -1.84
SF3B3Q15393 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.56□□□□□ -1.84
SF3B3Q15393 SNORD5.1-201ENST00000458800 75 ntBASIC3.56□□□□□ -1.84
SF3B3Q15393 RNU7-138P-201ENST00000459479 64 ntBASIC3.56□□□□□ -1.84
SF3B3Q15393 AL049874.1-201ENST00000489560 388 ntBASIC3.56□□□□□ -1.84
SF3B3Q15393 MLLT10P2-201ENST00000506434 249 ntBASIC3.56□□□□□ -1.84
SF3B3Q15393 AC096745.1-201ENST00000509945 370 ntBASIC3.56□□□□□ -1.84
SF3B3Q15393 AC092436.3-201ENST00000511788 257 ntBASIC3.56□□□□□ -1.84
SF3B3Q15393 RNA5SP471-201ENST00000516971 106 ntBASIC3.56□□□□□ -1.84
SF3B3Q15393 RNU6-1137P-201ENST00000517073 99 ntBASIC3.56□□□□□ -1.84
SF3B3Q15393 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.56□□□□□ -1.84
SF3B3Q15393 MIR548AC-201ENST00000585049 88 ntBASIC3.56□□□□□ -1.84
SF3B3Q15393 PISRT1.1-201ENST00000616930 107 ntBASIC3.56□□□□□ -1.84
SF3B3Q15393 AL031601.2-202ENST00000622650 282 ntBASIC3.56□□□□□ -1.84
SF3B3Q15393 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.56□□□□□ -1.84
SF3B3Q15393 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
SF3B3Q15393 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.56□□□□□ -1.84
SF3B3Q15393 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
SF3B3Q15393 MTND5P30-201ENST00000452896 1731 ntBASIC3.56□□□□□ -1.84
SF3B3Q15393 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SF3B3Q15393 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SF3B3Q15393 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.55□□□□□ -1.84
SF3B3Q15393 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.55□□□□□ -1.84
SF3B3Q15393 SRP72P2-201ENST00000344851 1979 ntBASIC3.55□□□□□ -1.84
SF3B3Q15393 AL049641.1-201ENST00000441055 1948 ntBASIC3.55□□□□□ -1.84
SF3B3Q15393 AL136360.1-201ENST00000503377 1900 ntBASIC3.55□□□□□ -1.84
SF3B3Q15393 Y_RNA.133-201ENST00000363428 110 ntBASIC3.55□□□□□ -1.84
SF3B3Q15393 Y_RNA.144-201ENST00000363521 113 ntBASIC3.55□□□□□ -1.84
SF3B3Q15393 Y_RNA.473-201ENST00000384333 102 ntBASIC3.55□□□□□ -1.84
SF3B3Q15393 SNORA75.6-201ENST00000391318 127 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms