Protein–RNA interactions for Protein: Q10570

CPSF1, Cleavage and polyadenylation specificity factor subunit 1, humanhuman

Known RBP Predictions only

Length 1,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1Q10570 AC138393.1-203ENST00000327086 343 ntBASIC0.44□□□□□ -2.34
CPSF1Q10570 SNORA4.1-201ENST00000364263 144 ntBASIC0.44□□□□□ -2.34
CPSF1Q10570 RNU6-658P-201ENST00000384606 106 ntBASIC0.44□□□□□ -2.34
CPSF1Q10570 SNORD116-23-201ENST00000384645 92 ntBASIC0.44□□□□□ -2.34
CPSF1Q10570 MIR16-1-201ENST00000385271 89 ntBASIC0.44□□□□□ -2.34
CPSF1Q10570 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
CPSF1Q10570 RNU6-360P-201ENST00000390944 104 ntBASIC0.44□□□□□ -2.34
CPSF1Q10570 AC000111.3-201ENST00000433478 193 ntBASIC0.44□□□□□ -2.34
CPSF1Q10570 AC092170.1-201ENST00000440211 356 ntBASIC0.44□□□□□ -2.34
CPSF1Q10570 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.44□□□□□ -2.34
CPSF1Q10570 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
CPSF1Q10570 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.44□□□□□ -2.34
CPSF1Q10570 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
CPSF1Q10570 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC0.44□□□□□ -2.34
CPSF1Q10570 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.44□□□□□ -2.34
CPSF1Q10570 AC090502.2-201ENST00000549267 280 ntBASIC0.44□□□□□ -2.34
CPSF1Q10570 AC011451.2-201ENST00000604303 598 ntBASIC0.44□□□□□ -2.34
CPSF1Q10570 MZT1P2-201ENST00000604387 248 ntBASIC0.44□□□□□ -2.34
CPSF1Q10570 Z82243.1-201ENST00000609432 473 ntBASIC0.44□□□□□ -2.34
CPSF1Q10570 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.44□□□□□ -2.34
CPSF1Q10570 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.43□□□□□ -2.34
CPSF1Q10570 U3.8-201ENST00000363675 217 ntBASIC0.43□□□□□ -2.34
CPSF1Q10570 RNU6-1065P-201ENST00000384513 106 ntBASIC0.43□□□□□ -2.34
CPSF1Q10570 MRPL35P1-201ENST00000404272 572 ntBASIC0.43□□□□□ -2.34
CPSF1Q10570 UBE2V1P11-201ENST00000411559 285 ntBASIC0.43□□□□□ -2.34
CPSF1Q10570 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.43□□□□□ -2.34
CPSF1Q10570 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.43□□□□□ -2.34
CPSF1Q10570 FTH1P12-201ENST00000432137 551 ntBASIC0.43□□□□□ -2.34
CPSF1Q10570 UBE2V1P8-201ENST00000437166 265 ntBASIC0.43□□□□□ -2.34
CPSF1Q10570 AC092001.1-201ENST00000453012 261 ntBASIC0.43□□□□□ -2.34
CPSF1Q10570 MTND3P4-201ENST00000453537 303 ntBASIC0.43□□□□□ -2.34
CPSF1Q10570 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC0.43□□□□□ -2.34
CPSF1Q10570 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC0.43□□□□□ -2.34
CPSF1Q10570 AC022616.8-201ENST00000533569 253 ntBASIC0.43□□□□□ -2.34
CPSF1Q10570 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.43□□□□□ -2.34
CPSF1Q10570 AC008088.1-201ENST00000580993 280 ntBASIC0.43□□□□□ -2.34
CPSF1Q10570 BNIP3P24-201ENST00000593398 557 ntBASIC0.43□□□□□ -2.34
CPSF1Q10570 AC034229.4-201ENST00000607861 441 ntBASIC0.43□□□□□ -2.34
CPSF1Q10570 AC010133.1-201ENST00000615809 842 ntBASIC0.43□□□□□ -2.34
CPSF1Q10570 MIR6718-201ENST00000616153 80 ntBASIC0.43□□□□□ -2.34
CPSF1Q10570 AC100821.1-201ENST00000523153 2479 ntBASIC0.42□□□□□ -2.34
CPSF1Q10570 MTND4P12-201ENST00000498999 1377 ntBASIC0.42□□□□□ -2.34
CPSF1Q10570 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC0.42□□□□□ -2.34
CPSF1Q10570 RNU6-252P-201ENST00000363232 107 ntBASIC0.42□□□□□ -2.34
CPSF1Q10570 RNU6-112P-201ENST00000363599 104 ntBASIC0.42□□□□□ -2.34
CPSF1Q10570 RNU1-39P-201ENST00000383897 165 ntBASIC0.42□□□□□ -2.34
CPSF1Q10570 TMSB4XP8-201ENST00000402089 135 ntBASIC0.42□□□□□ -2.34
CPSF1Q10570 TMSB4XP6-201ENST00000415187 135 ntBASIC0.42□□□□□ -2.34
CPSF1Q10570 TMSB4XP1-201ENST00000424567 135 ntBASIC0.42□□□□□ -2.34
CPSF1Q10570 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.42□□□□□ -2.34
CPSF1Q10570 OR2AQ1P-201ENST00000451972 200 ntBASIC0.42□□□□□ -2.34
CPSF1Q10570 TRBVA-201ENST00000498804 316 ntBASIC0.42□□□□□ -2.34
CPSF1Q10570 AC048346.1-201ENST00000510247 144 ntBASIC0.42□□□□□ -2.34
CPSF1Q10570 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.42□□□□□ -2.34
CPSF1Q10570 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC0.42□□□□□ -2.34
CPSF1Q10570 TRAV32-201ENST00000553993 340 ntBASIC0.42□□□□□ -2.34
CPSF1Q10570 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC0.42□□□□□ -2.34
CPSF1Q10570 AC096586.1-201ENST00000610267 561 ntBASIC0.42□□□□□ -2.34
CPSF1Q10570 AL118556.2-201ENST00000614375 824 ntBASIC0.42□□□□□ -2.34
CPSF1Q10570 Y_RNA.412-201ENST00000384001 104 ntBASIC0.41□□□□□ -2.34
CPSF1Q10570 AL133475.1-201ENST00000404414 305 ntBASIC0.41□□□□□ -2.34
CPSF1Q10570 AL161935.2-201ENST00000414627 60 ntBASIC0.41□□□□□ -2.34
CPSF1Q10570 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.41□□□□□ -2.34
CPSF1Q10570 RPL31P35-201ENST00000431058 377 ntBASIC0.41□□□□□ -2.34
CPSF1Q10570 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC0.41□□□□□ -2.34
CPSF1Q10570 HMGN1P10-201ENST00000474557 553 ntBASIC0.41□□□□□ -2.34
CPSF1Q10570 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.41□□□□□ -2.34
CPSF1Q10570 MTCYBP43-201ENST00000513621 740 ntBASIC0.41□□□□□ -2.34
CPSF1Q10570 RNU6-197P-201ENST00000516680 100 ntBASIC0.41□□□□□ -2.34
CPSF1Q10570 ACA59.2-201ENST00000517061 156 ntBASIC0.41□□□□□ -2.34
CPSF1Q10570 AP003392.2-201ENST00000527269 208 ntBASIC0.41□□□□□ -2.34
CPSF1Q10570 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.41□□□□□ -2.34
CPSF1Q10570 AL355802.4-201ENST00000607635 548 ntBASIC0.41□□□□□ -2.34
CPSF1Q10570 AC004908.3-201ENST00000610248 625 ntBASIC0.41□□□□□ -2.34
CPSF1Q10570 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
CPSF1Q10570 Y_RNA.99-201ENST00000363138 105 ntBASIC0.4□□□□□ -2.34
CPSF1Q10570 RNU6-1280P-201ENST00000365211 107 ntBASIC0.4□□□□□ -2.34
CPSF1Q10570 MTCO1P56-201ENST00000401674 224 ntBASIC0.4□□□□□ -2.34
CPSF1Q10570 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC0.4□□□□□ -2.34
CPSF1Q10570 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC0.4□□□□□ -2.34
CPSF1Q10570 GTF2IP12-201ENST00000456547 356 ntBASIC0.4□□□□□ -2.34
CPSF1Q10570 RPL30P1-201ENST00000488676 339 ntBASIC0.4□□□□□ -2.34
CPSF1Q10570 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.4□□□□□ -2.34
CPSF1Q10570 AL512310.8-201ENST00000550183 120 ntBASIC0.4□□□□□ -2.34
CPSF1Q10570 AC022387.2-201ENST00000604050 448 ntBASIC0.4□□□□□ -2.34
CPSF1Q10570 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.4□□□□□ -2.34
CPSF1Q10570 RNU6-23P-201ENST00000363283 107 ntBASIC0.39□□□□□ -2.35
CPSF1Q10570 Y_RNA.255-201ENST00000364581 97 ntBASIC0.39□□□□□ -2.35
CPSF1Q10570 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
CPSF1Q10570 TRIM60P5Y-201ENST00000413946 574 ntBASIC0.39□□□□□ -2.35
CPSF1Q10570 DNAJA1P2-201ENST00000421360 1197 ntBASIC0.39□□□□□ -2.35
CPSF1Q10570 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC0.39□□□□□ -2.35
CPSF1Q10570 AC013267.1-201ENST00000458227 267 ntBASIC0.39□□□□□ -2.35
CPSF1Q10570 RPL7P43-201ENST00000478876 753 ntBASIC0.39□□□□□ -2.35
CPSF1Q10570 AC116655.1-201ENST00000508324 901 ntBASIC0.39□□□□□ -2.35
CPSF1Q10570 AC008628.1-201ENST00000508663 265 ntBASIC0.39□□□□□ -2.35
CPSF1Q10570 AP003327.1-201ENST00000529684 127 ntBASIC0.39□□□□□ -2.35
CPSF1Q10570 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.39□□□□□ -2.35
CPSF1Q10570 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC0.39□□□□□ -2.35
CPSF1Q10570 BNIP3P16-201ENST00000589779 534 ntBASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms