Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.36□□□□□ -2.03
GABPAQ06546 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.36□□□□□ -2.03
GABPAQ06546 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.36□□□□□ -2.03
GABPAQ06546 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
GABPAQ06546 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.36□□□□□ -2.03
GABPAQ06546 DEFB122-202ENST00000569013 197 ntBASIC2.36□□□□□ -2.03
GABPAQ06546 MIR4769-201ENST00000584126 77 ntBASIC2.36□□□□□ -2.03
GABPAQ06546 AC008121.1-201ENST00000603244 268 ntBASIC2.36□□□□□ -2.03
GABPAQ06546 AL356280.1-201ENST00000603614 379 ntBASIC2.36□□□□□ -2.03
GABPAQ06546 AL670379.10-201ENST00000604330 253 ntBASIC2.36□□□□□ -2.03
GABPAQ06546 AL670379.9-201ENST00000605428 253 ntBASIC2.36□□□□□ -2.03
GABPAQ06546 AL021997.1-201ENST00000605757 193 ntBASIC2.36□□□□□ -2.03
GABPAQ06546 AC007684.1-201ENST00000609671 477 ntBASIC2.36□□□□□ -2.03
GABPAQ06546 AL359854.1-201ENST00000614203 1594 ntBASIC2.36□□□□□ -2.03
GABPAQ06546 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.36□□□□□ -2.03
GABPAQ06546 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
GABPAQ06546 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.35□□□□□ -2.03
GABPAQ06546 ZNF680P1-201ENST00000436625 1469 ntBASIC2.35□□□□□ -2.03
GABPAQ06546 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.35□□□□□ -2.03
GABPAQ06546 SNORD14B-201ENST00000364533 90 ntBASIC2.35□□□□□ -2.03
GABPAQ06546 RNU6-384P-201ENST00000364900 104 ntBASIC2.35□□□□□ -2.03
GABPAQ06546 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
GABPAQ06546 RNU5A-6P-201ENST00000384136 116 ntBASIC2.35□□□□□ -2.03
GABPAQ06546 BTF3L4P1-201ENST00000413813 468 ntBASIC2.35□□□□□ -2.03
GABPAQ06546 MTCO3P30-201ENST00000426425 670 ntBASIC2.35□□□□□ -2.03
GABPAQ06546 AC073464.1-201ENST00000429823 534 ntBASIC2.35□□□□□ -2.03
GABPAQ06546 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.35□□□□□ -2.03
GABPAQ06546 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.35□□□□□ -2.03
GABPAQ06546 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.35□□□□□ -2.03
GABPAQ06546 AC007677.1-201ENST00000445757 515 ntBASIC2.35□□□□□ -2.03
GABPAQ06546 IFNA11P-201ENST00000446352 526 ntBASIC2.35□□□□□ -2.03
GABPAQ06546 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.35□□□□□ -2.03
GABPAQ06546 MTND1P29-201ENST00000448112 647 ntBASIC2.35□□□□□ -2.03
GABPAQ06546 AC012308.1-201ENST00000451232 178 ntBASIC2.35□□□□□ -2.03
GABPAQ06546 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.35□□□□□ -2.03
GABPAQ06546 RPL36AP48-201ENST00000485521 314 ntBASIC2.35□□□□□ -2.03
GABPAQ06546 HMGB1P30-201ENST00000492455 606 ntBASIC2.35□□□□□ -2.03
GABPAQ06546 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
GABPAQ06546 SCARNA3-201ENST00000517097 143 ntBASIC2.35□□□□□ -2.03
GABPAQ06546 RNU1-104P-201ENST00000517280 175 ntBASIC2.35□□□□□ -2.03
GABPAQ06546 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.35□□□□□ -2.03
GABPAQ06546 AP003392.2-201ENST00000527269 208 ntBASIC2.35□□□□□ -2.03
GABPAQ06546 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.35□□□□□ -2.03
GABPAQ06546 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.35□□□□□ -2.03
GABPAQ06546 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.35□□□□□ -2.03
GABPAQ06546 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.35□□□□□ -2.03
GABPAQ06546 MIR6845-201ENST00000613182 61 ntBASIC2.35□□□□□ -2.03
GABPAQ06546 AP001486.3-201ENST00000615334 372 ntBASIC2.35□□□□□ -2.03
GABPAQ06546 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.35□□□□□ -2.03
GABPAQ06546 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
GABPAQ06546 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.35□□□□□ -2.03
GABPAQ06546 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
GABPAQ06546 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
GABPAQ06546 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.34□□□□□ -2.03
GABPAQ06546 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
GABPAQ06546 RNU6-72P-201ENST00000384285 79 ntBASIC2.34□□□□□ -2.03
GABPAQ06546 RNU6-606P-201ENST00000384721 111 ntBASIC2.34□□□□□ -2.03
GABPAQ06546 Y_RNA.582-201ENST00000391023 95 ntBASIC2.34□□□□□ -2.03
GABPAQ06546 SNORA26.9-201ENST00000391322 122 ntBASIC2.34□□□□□ -2.03
GABPAQ06546 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
GABPAQ06546 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
GABPAQ06546 AF274854.1-201ENST00000413236 615 ntBASIC2.34□□□□□ -2.03
GABPAQ06546 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.34□□□□□ -2.03
GABPAQ06546 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.34□□□□□ -2.03
GABPAQ06546 AC002486.1-201ENST00000435098 391 ntBASIC2.34□□□□□ -2.03
GABPAQ06546 AL451074.3-201ENST00000437709 472 ntBASIC2.34□□□□□ -2.03
GABPAQ06546 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.34□□□□□ -2.03
GABPAQ06546 HMGN2P23-201ENST00000456759 269 ntBASIC2.34□□□□□ -2.03
GABPAQ06546 AC112771.1-201ENST00000463581 102 ntBASIC2.34□□□□□ -2.03
GABPAQ06546 MTAPP1-201ENST00000489154 819 ntBASIC2.34□□□□□ -2.03
GABPAQ06546 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
GABPAQ06546 AC104136.1-201ENST00000512969 394 ntBASIC2.34□□□□□ -2.03
GABPAQ06546 RNU1-86P-201ENST00000516108 154 ntBASIC2.34□□□□□ -2.03
GABPAQ06546 RNU1-107P-201ENST00000516617 154 ntBASIC2.34□□□□□ -2.03
GABPAQ06546 RNU6-295P-201ENST00000516901 104 ntBASIC2.34□□□□□ -2.03
GABPAQ06546 FAM92A1P1-201ENST00000528023 890 ntBASIC2.34□□□□□ -2.03
GABPAQ06546 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.34□□□□□ -2.03
GABPAQ06546 MIR4703-201ENST00000577728 79 ntBASIC2.34□□□□□ -2.03
GABPAQ06546 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.34□□□□□ -2.03
GABPAQ06546 MIR3616-201ENST00000584070 92 ntBASIC2.34□□□□□ -2.03
GABPAQ06546 AC073539.2-201ENST00000597113 165 ntBASIC2.34□□□□□ -2.03
GABPAQ06546 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.34□□□□□ -2.03
GABPAQ06546 AC009090.3-201ENST00000616553 565 ntBASIC2.34□□□□□ -2.03
GABPAQ06546 uc_338.11-201ENST00000619132 160 ntBASIC2.34□□□□□ -2.03
GABPAQ06546 AC048344.4-201ENST00000619744 527 ntBASIC2.34□□□□□ -2.03
GABPAQ06546 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.04
GABPAQ06546 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.34□□□□□ -2.04
GABPAQ06546 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
GABPAQ06546 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.33□□□□□ -2.04
GABPAQ06546 AC138393.1-203ENST00000327086 343 ntBASIC2.33□□□□□ -2.04
GABPAQ06546 Y_RNA.159-201ENST00000363674 87 ntBASIC2.33□□□□□ -2.04
GABPAQ06546 SNORA67.1-201ENST00000364749 141 ntBASIC2.33□□□□□ -2.04
GABPAQ06546 RNU6-715P-201ENST00000365204 103 ntBASIC2.33□□□□□ -2.04
GABPAQ06546 RNU6-45P-201ENST00000384471 107 ntBASIC2.33□□□□□ -2.04
GABPAQ06546 RNU6-220P-201ENST00000390919 107 ntBASIC2.33□□□□□ -2.04
GABPAQ06546 AL353621.1-201ENST00000418219 243 ntBASIC2.33□□□□□ -2.04
GABPAQ06546 CYCSP49-201ENST00000420810 319 ntBASIC2.33□□□□□ -2.04
GABPAQ06546 USP9YP14-201ENST00000430663 563 ntBASIC2.33□□□□□ -2.04
GABPAQ06546 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.33□□□□□ -2.04
GABPAQ06546 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms