Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 MIR3664-201ENST00000579074 99 ntBASIC0.36□□□□□ -2.35
SSBP1Q04837 VN1R83P-201ENST00000595685 445 ntBASIC0.36□□□□□ -2.35
SSBP1Q04837 BNIP3P30-201ENST00000601184 574 ntBASIC0.36□□□□□ -2.35
SSBP1Q04837 VN1R82P-201ENST00000601481 356 ntBASIC0.36□□□□□ -2.35
SSBP1Q04837 AL450270.1-201ENST00000606160 391 ntBASIC0.36□□□□□ -2.35
SSBP1Q04837 AC243773.3-201ENST00000613270 256 ntBASIC0.36□□□□□ -2.35
SSBP1Q04837 AC123767.1-202ENST00000620407 817 ntBASIC0.36□□□□□ -2.35
SSBP1Q04837 AL445264.1-201ENST00000621719 171 ntBASIC0.36□□□□□ -2.35
SSBP1Q04837 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.36□□□□□ -2.35
SSBP1Q04837 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
SSBP1Q04837 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
SSBP1Q04837 snoU2_19.1-201ENST00000362361 80 ntBASIC0.35□□□□□ -2.35
SSBP1Q04837 SNORD18A-201ENST00000363753 72 ntBASIC0.35□□□□□ -2.35
SSBP1Q04837 RNU6-331P-201ENST00000384724 107 ntBASIC0.35□□□□□ -2.35
SSBP1Q04837 MIR194-1-201ENST00000384892 85 ntBASIC0.35□□□□□ -2.35
SSBP1Q04837 MIR10B-201ENST00000385011 110 ntBASIC0.35□□□□□ -2.35
SSBP1Q04837 RNU6-932P-201ENST00000391108 106 ntBASIC0.35□□□□□ -2.35
SSBP1Q04837 CBX3P9-201ENST00000402326 552 ntBASIC0.35□□□□□ -2.35
SSBP1Q04837 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC0.35□□□□□ -2.35
SSBP1Q04837 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.35□□□□□ -2.35
SSBP1Q04837 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.35□□□□□ -2.35
SSBP1Q04837 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0.35□□□□□ -2.35
SSBP1Q04837 HMGN2P9-201ENST00000476875 229 ntBASIC0.35□□□□□ -2.35
SSBP1Q04837 AC134050.1-201ENST00000495088 933 ntBASIC0.35□□□□□ -2.35
SSBP1Q04837 AC114981.1-201ENST00000503897 678 ntBASIC0.35□□□□□ -2.35
SSBP1Q04837 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.35□□□□□ -2.35
SSBP1Q04837 AC023632.1-201ENST00000518463 375 ntBASIC0.35□□□□□ -2.35
SSBP1Q04837 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.35□□□□□ -2.35
SSBP1Q04837 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.35□□□□□ -2.35
SSBP1Q04837 AC136618.2-201ENST00000575091 400 ntBASIC0.35□□□□□ -2.35
SSBP1Q04837 AC008751.2-201ENST00000597885 980 ntBASIC0.35□□□□□ -2.35
SSBP1Q04837 AL590229.1-201ENST00000603497 542 ntBASIC0.35□□□□□ -2.35
SSBP1Q04837 AC016727.1-205ENST00000605437 569 ntBASIC0.35□□□□□ -2.35
SSBP1Q04837 AC105129.3-201ENST00000605455 485 ntBASIC0.35□□□□□ -2.35
SSBP1Q04837 AC130324.3-201ENST00000614165 542 ntBASIC0.35□□□□□ -2.35
SSBP1Q04837 AL357080.1-201ENST00000617394 239 ntBASIC0.35□□□□□ -2.35
SSBP1Q04837 AC010975.3-201ENST00000618727 978 ntBASIC0.35□□□□□ -2.35
SSBP1Q04837 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.35□□□□□ -2.35
SSBP1Q04837 AC120349.2-201ENST00000625002 298 ntBASIC0.35□□□□□ -2.35
SSBP1Q04837 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.35□□□□□ -2.35
SSBP1Q04837 MIR6767-201ENST00000637302 66 ntBASIC0.35□□□□□ -2.35
SSBP1Q04837 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.35□□□□□ -2.35
SSBP1Q04837 RNU6-1210P-201ENST00000363775 107 ntBASIC0.34□□□□□ -2.36
SSBP1Q04837 RNU6-549P-201ENST00000384433 107 ntBASIC0.34□□□□□ -2.36
SSBP1Q04837 MIR520A-201ENST00000384862 85 ntBASIC0.34□□□□□ -2.36
SSBP1Q04837 RNU6-952P-201ENST00000391164 108 ntBASIC0.34□□□□□ -2.36
SSBP1Q04837 Y_RNA.597-201ENST00000410463 100 ntBASIC0.34□□□□□ -2.36
SSBP1Q04837 RPL21P24-201ENST00000413752 448 ntBASIC0.34□□□□□ -2.36
SSBP1Q04837 UBE2V1P10-201ENST00000414685 269 ntBASIC0.34□□□□□ -2.36
SSBP1Q04837 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.34□□□□□ -2.36
SSBP1Q04837 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.34□□□□□ -2.36
SSBP1Q04837 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.34□□□□□ -2.36
SSBP1Q04837 AC114737.2-201ENST00000421583 173 ntBASIC0.34□□□□□ -2.36
SSBP1Q04837 AL592045.1-201ENST00000429867 352 ntBASIC0.34□□□□□ -2.36
SSBP1Q04837 CETN4P-201ENST00000432407 469 ntBASIC0.34□□□□□ -2.36
SSBP1Q04837 MTCYBP15-201ENST00000433123 1127 ntBASIC0.34□□□□□ -2.36
SSBP1Q04837 AC244505.5-201ENST00000443639 207 ntBASIC0.34□□□□□ -2.36
SSBP1Q04837 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.34□□□□□ -2.36
SSBP1Q04837 MTND5P8-201ENST00000449817 1083 ntBASIC0.34□□□□□ -2.36
SSBP1Q04837 AC108059.3-201ENST00000456388 214 ntBASIC0.34□□□□□ -2.36
SSBP1Q04837 BET1P1-201ENST00000482276 359 ntBASIC0.34□□□□□ -2.36
SSBP1Q04837 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC0.34□□□□□ -2.36
SSBP1Q04837 SNORA31.19-201ENST00000517079 126 ntBASIC0.34□□□□□ -2.36
SSBP1Q04837 AC090142.3-201ENST00000519012 385 ntBASIC0.34□□□□□ -2.36
SSBP1Q04837 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC0.34□□□□□ -2.36
SSBP1Q04837 AC023538.1-201ENST00000534576 736 ntBASIC0.34□□□□□ -2.36
SSBP1Q04837 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
SSBP1Q04837 AC015712.3-201ENST00000559380 164 ntBASIC0.34□□□□□ -2.36
SSBP1Q04837 AC025678.1-201ENST00000567861 338 ntBASIC0.34□□□□□ -2.36
SSBP1Q04837 MTCYBP33-201ENST00000575007 1130 ntBASIC0.34□□□□□ -2.36
SSBP1Q04837 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.34□□□□□ -2.36
SSBP1Q04837 AP001981.2-201ENST00000603241 418 ntBASIC0.34□□□□□ -2.36
SSBP1Q04837 AP000942.3-201ENST00000603702 160 ntBASIC0.34□□□□□ -2.36
SSBP1Q04837 BNIP3P31-201ENST00000604515 566 ntBASIC0.34□□□□□ -2.36
SSBP1Q04837 AC063943.3-201ENST00000615562 356 ntBASIC0.34□□□□□ -2.36
SSBP1Q04837 AC023934.1-201ENST00000574529 2389 ntBASIC0.34□□□□□ -2.36
SSBP1Q04837 LINC02555-201ENST00000563933 1951 ntBASIC0.34□□□□□ -2.36
SSBP1Q04837 MIR29B2-201ENST00000385055 81 ntBASIC0.33□□□□□ -2.36
SSBP1Q04837 RNU2-7P-201ENST00000410794 178 ntBASIC0.33□□□□□ -2.36
SSBP1Q04837 AC027644.1-201ENST00000419595 298 ntBASIC0.33□□□□□ -2.36
SSBP1Q04837 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.33□□□□□ -2.36
SSBP1Q04837 MTCO2P25-201ENST00000447065 681 ntBASIC0.33□□□□□ -2.36
SSBP1Q04837 RNU7-136P-201ENST00000458819 69 ntBASIC0.33□□□□□ -2.36
SSBP1Q04837 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.33□□□□□ -2.36
SSBP1Q04837 SNORA31.3-201ENST00000516029 96 ntBASIC0.33□□□□□ -2.36
SSBP1Q04837 RNU5A-4P-201ENST00000516588 111 ntBASIC0.33□□□□□ -2.36
SSBP1Q04837 RNA5SP168-201ENST00000516642 112 ntBASIC0.33□□□□□ -2.36
SSBP1Q04837 SNORA70.22-201ENST00000517160 124 ntBASIC0.33□□□□□ -2.36
SSBP1Q04837 RNU6-165P-201ENST00000517170 99 ntBASIC0.33□□□□□ -2.36
SSBP1Q04837 DEFB108E-201ENST00000524692 240 ntBASIC0.33□□□□□ -2.36
SSBP1Q04837 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.33□□□□□ -2.36
SSBP1Q04837 AC011604.1-201ENST00000545978 196 ntBASIC0.33□□□□□ -2.36
SSBP1Q04837 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC0.33□□□□□ -2.36
SSBP1Q04837 AC044913.1-201ENST00000557200 430 ntBASIC0.33□□□□□ -2.36
SSBP1Q04837 AC137800.2-201ENST00000574375 120 ntBASIC0.33□□□□□ -2.36
SSBP1Q04837 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.33□□□□□ -2.36
SSBP1Q04837 AC022432.1-201ENST00000595739 310 ntBASIC0.33□□□□□ -2.36
SSBP1Q04837 AC009229.3-201ENST00000608056 282 ntBASIC0.33□□□□□ -2.36
SSBP1Q04837 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.33□□□□□ -2.36
SSBP1Q04837 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms