Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 RNU6-140P-201ENST00000384566 108 ntBASIC0.07□□□□□ -2.4
HSPG2P98160 RNU6-360P-201ENST00000390944 104 ntBASIC0.07□□□□□ -2.4
HSPG2P98160 CCNG1P1-201ENST00000406783 885 ntBASIC0.07□□□□□ -2.4
HSPG2P98160 RNU2-7P-201ENST00000410794 178 ntBASIC0.07□□□□□ -2.4
HSPG2P98160 MTND4LP11-201ENST00000422184 280 ntBASIC0.07□□□□□ -2.4
HSPG2P98160 FAM204CP-201ENST00000424489 642 ntBASIC0.07□□□□□ -2.4
HSPG2P98160 ISCA1P1-201ENST00000426679 387 ntBASIC0.07□□□□□ -2.4
HSPG2P98160 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.07□□□□□ -2.4
HSPG2P98160 NDUFB4P10-201ENST00000452541 359 ntBASIC0.07□□□□□ -2.4
HSPG2P98160 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC0.07□□□□□ -2.4
HSPG2P98160 HMGN1P13-201ENST00000505795 138 ntBASIC0.07□□□□□ -2.4
HSPG2P98160 AC113398.2-201ENST00000507630 558 ntBASIC0.07□□□□□ -2.4
HSPG2P98160 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC0.07□□□□□ -2.4
HSPG2P98160 RNA5SP255-201ENST00000516370 107 ntBASIC0.07□□□□□ -2.4
HSPG2P98160 NACAP3-201ENST00000552100 481 ntBASIC0.07□□□□□ -2.4
HSPG2P98160 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.07□□□□□ -2.4
HSPG2P98160 MIR378F-201ENST00000578143 78 ntBASIC0.07□□□□□ -2.4
HSPG2P98160 AC012669.1-201ENST00000603209 283 ntBASIC0.07□□□□□ -2.4
HSPG2P98160 Z75746.1-201ENST00000440243 2080 ntBASIC0.06□□□□□ -2.4
HSPG2P98160 RNU4-9P-201ENST00000364951 139 ntBASIC0.06□□□□□ -2.4
HSPG2P98160 SNORA25B-201ENST00000365507 128 ntBASIC0.06□□□□□ -2.4
HSPG2P98160 MIR635-201ENST00000384830 98 ntBASIC0.06□□□□□ -2.4
HSPG2P98160 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC0.06□□□□□ -2.4
HSPG2P98160 AL512844.2-201ENST00000433990 593 ntBASIC0.06□□□□□ -2.4
HSPG2P98160 FABP5P14-201ENST00000437273 393 ntBASIC0.06□□□□□ -2.4
HSPG2P98160 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC0.06□□□□□ -2.4
HSPG2P98160 PAXBP1P1-201ENST00000449315 447 ntBASIC0.06□□□□□ -2.4
HSPG2P98160 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC0.06□□□□□ -2.4
HSPG2P98160 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC0.06□□□□□ -2.4
HSPG2P98160 RNU6-902P-201ENST00000517212 91 ntBASIC0.06□□□□□ -2.4
HSPG2P98160 RAB11AP2-201ENST00000545905 639 ntBASIC0.06□□□□□ -2.4
HSPG2P98160 AC009268.1-201ENST00000561352 1203 ntBASIC0.06□□□□□ -2.4
HSPG2P98160 AC233702.2-202ENST00000562547 291 ntBASIC0.06□□□□□ -2.4
HSPG2P98160 AP000811.1-201ENST00000603803 651 ntBASIC0.06□□□□□ -2.4
HSPG2P98160 AC239868.4-201ENST00000608318 671 ntBASIC0.06□□□□□ -2.4
HSPG2P98160 AC104465.1-201ENST00000611365 139 ntBASIC0.06□□□□□ -2.4
HSPG2P98160 AC024257.5-201ENST00000612739 531 ntBASIC0.06□□□□□ -2.4
HSPG2P98160 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC0.06□□□□□ -2.4
HSPG2P98160 AP003072.5-201ENST00000623872 773 ntBASIC0.06□□□□□ -2.4
HSPG2P98160 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC0.06□□□□□ -2.4
HSPG2P98160 RNU6-112P-201ENST00000363599 104 ntBASIC0.06□□□□□ -2.4
HSPG2P98160 SNORD51-201ENST00000384320 80 ntBASIC0.06□□□□□ -2.4
HSPG2P98160 RNA5SP496-201ENST00000391240 109 ntBASIC0.06□□□□□ -2.4
HSPG2P98160 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
HSPG2P98160 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.06□□□□□ -2.4
HSPG2P98160 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.06□□□□□ -2.4
HSPG2P98160 RNU7-40P-201ENST00000516397 64 ntBASIC0.06□□□□□ -2.4
HSPG2P98160 NRON-201ENST00000517270 370 ntBASIC0.06□□□□□ -2.4
HSPG2P98160 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC0.06□□□□□ -2.4
HSPG2P98160 AC004775.1-201ENST00000607389 753 ntBASIC0.06□□□□□ -2.4
HSPG2P98160 UBE2Q2P6-201ENST00000612666 153 ntBASIC0.06□□□□□ -2.4
HSPG2P98160 uc_338.15-201ENST00000615470 191 ntBASIC0.06□□□□□ -2.4
HSPG2P98160 AC024581.2-201ENST00000619986 252 ntBASIC0.06□□□□□ -2.4
HSPG2P98160 AC090772.4-201ENST00000623599 362 ntBASIC0.06□□□□□ -2.4
HSPG2P98160 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
HSPG2P98160 GDI2P1-201ENST00000429312 1336 ntBASIC0.06□□□□□ -2.4
HSPG2P98160 MIR411-201ENST00000362239 96 ntBASIC0.06□□□□□ -2.4
HSPG2P98160 RNY3P5-201ENST00000384127 102 ntBASIC0.06□□□□□ -2.4
HSPG2P98160 MIR135A2-201ENST00000384854 100 ntBASIC0.06□□□□□ -2.4
HSPG2P98160 AC069282.1-201ENST00000411911 526 ntBASIC0.06□□□□□ -2.4
HSPG2P98160 RPL22P18-201ENST00000417197 377 ntBASIC0.06□□□□□ -2.4
HSPG2P98160 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.06□□□□□ -2.4
HSPG2P98160 MTCO3P2-201ENST00000457365 171 ntBASIC0.06□□□□□ -2.4
HSPG2P98160 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.06□□□□□ -2.4
HSPG2P98160 AC010409.1-201ENST00000487382 476 ntBASIC0.06□□□□□ -2.4
HSPG2P98160 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.06□□□□□ -2.4
HSPG2P98160 SCARNA16.2-201ENST00000516520 172 ntBASIC0.06□□□□□ -2.4
HSPG2P98160 RNA5SP503-201ENST00000517047 117 ntBASIC0.06□□□□□ -2.4
HSPG2P98160 CYB5AP5-201ENST00000549779 389 ntBASIC0.06□□□□□ -2.4
HSPG2P98160 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC0.06□□□□□ -2.4
HSPG2P98160 AL078604.3-201ENST00000615580 211 ntBASIC0.06□□□□□ -2.4
HSPG2P98160 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC0.06□□□□□ -2.4
HSPG2P98160 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC0.06□□□□□ -2.4
HSPG2P98160 AC023934.1-201ENST00000574529 2389 ntBASIC0.06□□□□□ -2.4
HSPG2P98160 SNORD82-201ENST00000365530 70 ntBASIC0.06□□□□□ -2.4
HSPG2P98160 RNU6-750P-201ENST00000390946 107 ntBASIC0.06□□□□□ -2.4
HSPG2P98160 RPS26P5-201ENST00000418544 335 ntBASIC0.06□□□□□ -2.4
HSPG2P98160 PNRC2P1-201ENST00000423940 420 ntBASIC0.06□□□□□ -2.4
HSPG2P98160 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC0.06□□□□□ -2.4
HSPG2P98160 AC244505.3-201ENST00000454598 187 ntBASIC0.06□□□□□ -2.4
HSPG2P98160 AC084024.2-201ENST00000503480 791 ntBASIC0.06□□□□□ -2.4
HSPG2P98160 RN7SKP287-201ENST00000516546 266 ntBASIC0.06□□□□□ -2.4
HSPG2P98160 SCARNA3-201ENST00000517097 143 ntBASIC0.06□□□□□ -2.4
HSPG2P98160 SNORA70.22-201ENST00000517160 124 ntBASIC0.06□□□□□ -2.4
HSPG2P98160 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.06□□□□□ -2.4
HSPG2P98160 IGKV1-22-201ENST00000524313 326 ntBASIC0.06□□□□□ -2.4
HSPG2P98160 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.06□□□□□ -2.4
HSPG2P98160 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC0.06□□□□□ -2.4
HSPG2P98160 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC0.06□□□□□ -2.4
HSPG2P98160 MIR5093-201ENST00000583199 100 ntBASIC0.06□□□□□ -2.4
HSPG2P98160 AC100812.1-201ENST00000607622 580 ntBASIC0.06□□□□□ -2.4
HSPG2P98160 AC004908.3-201ENST00000610248 625 ntBASIC0.06□□□□□ -2.4
HSPG2P98160 AC009950.2-201ENST00000636548 183 ntBASIC0.06□□□□□ -2.4
HSPG2P98160 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.05□□□□□ -2.4
HSPG2P98160 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC0.05□□□□□ -2.4
HSPG2P98160 RNU6-414P-201ENST00000363705 104 ntBASIC0.05□□□□□ -2.4
HSPG2P98160 RNU6-950P-201ENST00000384651 107 ntBASIC0.05□□□□□ -2.4
HSPG2P98160 SNX2P2-201ENST00000424553 323 ntBASIC0.05□□□□□ -2.4
HSPG2P98160 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
HSPG2P98160 ELOCP14-201ENST00000428070 331 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms