Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.91□□□□□ -2.1
CBX1P83916 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.9□□□□□ -2.1
CBX1P83916 AC002543.1-201ENST00000299783 1954 ntBASIC1.9□□□□□ -2.1
CBX1P83916 Y_RNA.111-201ENST00000363248 100 ntBASIC1.9□□□□□ -2.11
CBX1P83916 RNU6-546P-201ENST00000383991 107 ntBASIC1.9□□□□□ -2.11
CBX1P83916 RNU5A-2P-201ENST00000384337 116 ntBASIC1.9□□□□□ -2.11
CBX1P83916 RNU6-997P-201ENST00000384725 107 ntBASIC1.9□□□□□ -2.11
CBX1P83916 OR9R1P-201ENST00000412200 877 ntBASIC1.9□□□□□ -2.11
CBX1P83916 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC1.9□□□□□ -2.11
CBX1P83916 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.9□□□□□ -2.11
CBX1P83916 AC000111.3-201ENST00000433478 193 ntBASIC1.9□□□□□ -2.11
CBX1P83916 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.9□□□□□ -2.11
CBX1P83916 AL353689.1-201ENST00000438895 199 ntBASIC1.9□□□□□ -2.11
CBX1P83916 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.9□□□□□ -2.11
CBX1P83916 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.9□□□□□ -2.11
CBX1P83916 MTCO3P9-201ENST00000506989 781 ntBASIC1.9□□□□□ -2.11
CBX1P83916 AC104806.1-201ENST00000508720 308 ntBASIC1.9□□□□□ -2.11
CBX1P83916 RN7SKP256-201ENST00000517201 314 ntBASIC1.9□□□□□ -2.11
CBX1P83916 AC090572.1-201ENST00000519251 160 ntBASIC1.9□□□□□ -2.11
CBX1P83916 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.9□□□□□ -2.11
CBX1P83916 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.9□□□□□ -2.11
CBX1P83916 AC087883.1-201ENST00000551882 391 ntBASIC1.9□□□□□ -2.11
CBX1P83916 CLIC4P2-201ENST00000601934 717 ntBASIC1.9□□□□□ -2.11
CBX1P83916 Z82243.1-201ENST00000609432 473 ntBASIC1.9□□□□□ -2.11
CBX1P83916 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.9□□□□□ -2.11
CBX1P83916 RMST_7.1-201ENST00000621935 268 ntBASIC1.9□□□□□ -2.11
CBX1P83916 RNU6-78P-201ENST00000362897 107 ntBASIC1.89□□□□□ -2.11
CBX1P83916 SNORD115-7-201ENST00000365306 82 ntBASIC1.89□□□□□ -2.11
CBX1P83916 MIR676-201ENST00000390702 67 ntBASIC1.89□□□□□ -2.11
CBX1P83916 SNORA11.4-201ENST00000408823 129 ntBASIC1.89□□□□□ -2.11
CBX1P83916 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC1.89□□□□□ -2.11
CBX1P83916 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.89□□□□□ -2.11
CBX1P83916 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.89□□□□□ -2.11
CBX1P83916 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.89□□□□□ -2.11
CBX1P83916 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.89□□□□□ -2.11
CBX1P83916 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.89□□□□□ -2.11
CBX1P83916 RPL30P12-201ENST00000474666 353 ntBASIC1.89□□□□□ -2.11
CBX1P83916 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.89□□□□□ -2.11
CBX1P83916 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.89□□□□□ -2.11
CBX1P83916 MTND3P25-201ENST00000509243 135 ntBASIC1.89□□□□□ -2.11
CBX1P83916 RNU6-410P-201ENST00000517006 107 ntBASIC1.89□□□□□ -2.11
CBX1P83916 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.89□□□□□ -2.11
CBX1P83916 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.89□□□□□ -2.11
CBX1P83916 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.89□□□□□ -2.11
CBX1P83916 AC073539.2-201ENST00000597113 165 ntBASIC1.89□□□□□ -2.11
CBX1P83916 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.89□□□□□ -2.11
CBX1P83916 MTND5P17-201ENST00000418405 1603 ntBASIC1.88□□□□□ -2.11
CBX1P83916 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.88□□□□□ -2.11
CBX1P83916 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CBX1P83916 SNORD115-3-201ENST00000363100 82 ntBASIC1.88□□□□□ -2.11
CBX1P83916 RNU6-116P-201ENST00000384042 109 ntBASIC1.88□□□□□ -2.11
CBX1P83916 RNU6-611P-201ENST00000384276 104 ntBASIC1.88□□□□□ -2.11
CBX1P83916 Y_RNA.500-201ENST00000384466 111 ntBASIC1.88□□□□□ -2.11
CBX1P83916 MIR29B2-201ENST00000385055 81 ntBASIC1.88□□□□□ -2.11
CBX1P83916 RNU2-48P-201ENST00000410694 191 ntBASIC1.88□□□□□ -2.11
CBX1P83916 BTF3L4P1-201ENST00000413813 468 ntBASIC1.88□□□□□ -2.11
CBX1P83916 OR6C66P-201ENST00000414917 930 ntBASIC1.88□□□□□ -2.11
CBX1P83916 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC1.88□□□□□ -2.11
CBX1P83916 USP9YP18-201ENST00000425912 695 ntBASIC1.88□□□□□ -2.11
CBX1P83916 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.88□□□□□ -2.11
CBX1P83916 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.88□□□□□ -2.11
CBX1P83916 AL353705.4-201ENST00000449661 238 ntBASIC1.88□□□□□ -2.11
CBX1P83916 RPL21P99-201ENST00000480369 423 ntBASIC1.88□□□□□ -2.11
CBX1P83916 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.88□□□□□ -2.11
CBX1P83916 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.88□□□□□ -2.11
CBX1P83916 OR5AL2P-201ENST00000532185 920 ntBASIC1.88□□□□□ -2.11
CBX1P83916 AP002453.2-201ENST00000533503 320 ntBASIC1.88□□□□□ -2.11
CBX1P83916 MIR4299-201ENST00000577899 72 ntBASIC1.88□□□□□ -2.11
CBX1P83916 MIR3162-201ENST00000581818 82 ntBASIC1.88□□□□□ -2.11
CBX1P83916 AC098848.2-201ENST00000588023 330 ntBASIC1.88□□□□□ -2.11
CBX1P83916 AC005034.5-201ENST00000604219 466 ntBASIC1.88□□□□□ -2.11
CBX1P83916 AL360219.1-201ENST00000610230 366 ntBASIC1.88□□□□□ -2.11
CBX1P83916 AC004908.3-201ENST00000610248 625 ntBASIC1.88□□□□□ -2.11
CBX1P83916 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.88□□□□□ -2.11
CBX1P83916 AL603839.4-201ENST00000624658 1005 ntBASIC1.88□□□□□ -2.11
CBX1P83916 AC110994.2-201ENST00000635481 492 ntBASIC1.88□□□□□ -2.11
CBX1P83916 U6.114-201ENST00000636407 96 ntBASIC1.88□□□□□ -2.11
CBX1P83916 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CBX1P83916 WWP1P1-201ENST00000466609 2769 ntBASIC1.87□□□□□ -2.11
CBX1P83916 MTND5P10-201ENST00000603719 1809 ntBASIC1.87□□□□□ -2.11
CBX1P83916 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
CBX1P83916 RNU6-944P-201ENST00000364023 107 ntBASIC1.87□□□□□ -2.11
CBX1P83916 RNU5E-7P-201ENST00000365290 117 ntBASIC1.87□□□□□ -2.11
CBX1P83916 Y_RNA.510-201ENST00000384511 114 ntBASIC1.87□□□□□ -2.11
CBX1P83916 MIR29C-201ENST00000385231 88 ntBASIC1.87□□□□□ -2.11
CBX1P83916 RNU4-53P-201ENST00000410828 140 ntBASIC1.87□□□□□ -2.11
CBX1P83916 RNU6-607P-201ENST00000411283 108 ntBASIC1.87□□□□□ -2.11
CBX1P83916 RNU6-195P-201ENST00000411352 109 ntBASIC1.87□□□□□ -2.11
CBX1P83916 HMGN1P14-201ENST00000412459 517 ntBASIC1.87□□□□□ -2.11
CBX1P83916 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.87□□□□□ -2.11
CBX1P83916 ISCA1P6-201ENST00000427740 390 ntBASIC1.87□□□□□ -2.11
CBX1P83916 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.87□□□□□ -2.11
CBX1P83916 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.87□□□□□ -2.11
CBX1P83916 AL360221.1-201ENST00000445989 335 ntBASIC1.87□□□□□ -2.11
CBX1P83916 AC079781.2-201ENST00000446424 169 ntBASIC1.87□□□□□ -2.11
CBX1P83916 AC245102.2-201ENST00000448956 180 ntBASIC1.87□□□□□ -2.11
CBX1P83916 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CBX1P83916 PRELID3BP1-201ENST00000457142 540 ntBASIC1.87□□□□□ -2.11
CBX1P83916 snoU109.1-201ENST00000459339 135 ntBASIC1.87□□□□□ -2.11
CBX1P83916 MTCYBP40-201ENST00000509390 1135 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms