Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 RNU2-72P-201ENST00000411175 163 ntBASIC0.88□□□□□ -2.27
CCL20P78556 RPL21P111-201ENST00000418453 477 ntBASIC0.88□□□□□ -2.27
CCL20P78556 MTCYBP5-201ENST00000423752 1135 ntBASIC0.88□□□□□ -2.27
CCL20P78556 AL669831.1-202ENST00000428504 417 ntBASIC0.88□□□□□ -2.27
CCL20P78556 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC0.88□□□□□ -2.27
CCL20P78556 USP9YP17-201ENST00000444617 696 ntBASIC0.88□□□□□ -2.27
CCL20P78556 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0.88□□□□□ -2.27
CCL20P78556 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC0.88□□□□□ -2.27
CCL20P78556 AC116353.3-201ENST00000511215 249 ntBASIC0.88□□□□□ -2.27
CCL20P78556 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC0.88□□□□□ -2.27
CCL20P78556 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC0.88□□□□□ -2.27
CCL20P78556 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.88□□□□□ -2.27
CCL20P78556 AC012414.6-201ENST00000568241 401 ntBASIC0.88□□□□□ -2.27
CCL20P78556 MIR5094-201ENST00000578766 85 ntBASIC0.88□□□□□ -2.27
CCL20P78556 AC103987.3-201ENST00000582071 292 ntBASIC0.88□□□□□ -2.27
CCL20P78556 AL022154.1-201ENST00000604698 785 ntBASIC0.88□□□□□ -2.27
CCL20P78556 AP000654.2-201ENST00000605633 586 ntBASIC0.88□□□□□ -2.27
CCL20P78556 AC091965.4-201ENST00000607691 587 ntBASIC0.88□□□□□ -2.27
CCL20P78556 AC072039.2-201ENST00000608883 439 ntBASIC0.88□□□□□ -2.27
CCL20P78556 AC022513.1-201ENST00000624512 117 ntBASIC0.88□□□□□ -2.27
CCL20P78556 SCARNA4-202ENST00000625402 129 ntBASIC0.88□□□□□ -2.27
CCL20P78556 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
CCL20P78556 ZNF209P-201ENST00000593450 2304 ntBASIC0.88□□□□□ -2.27
CCL20P78556 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
CCL20P78556 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
CCL20P78556 OR4G2P-201ENST00000328113 903 ntBASIC0.87□□□□□ -2.27
CCL20P78556 MIR302D-201ENST00000362275 68 ntBASIC0.87□□□□□ -2.27
CCL20P78556 RNA5SP190-201ENST00000365222 118 ntBASIC0.87□□□□□ -2.27
CCL20P78556 SNORA67.5-201ENST00000391036 107 ntBASIC0.87□□□□□ -2.27
CCL20P78556 AL136310.1-201ENST00000404926 654 ntBASIC0.87□□□□□ -2.27
CCL20P78556 AL357139.1-201ENST00000407792 426 ntBASIC0.87□□□□□ -2.27
CCL20P78556 RNU2-62P-201ENST00000410868 191 ntBASIC0.87□□□□□ -2.27
CCL20P78556 AC069282.1-201ENST00000411911 526 ntBASIC0.87□□□□□ -2.27
CCL20P78556 AL589872.1-201ENST00000426602 288 ntBASIC0.87□□□□□ -2.27
CCL20P78556 TXNL1P1-201ENST00000429528 554 ntBASIC0.87□□□□□ -2.27
CCL20P78556 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC0.87□□□□□ -2.27
CCL20P78556 UBE2V1P8-201ENST00000437166 265 ntBASIC0.87□□□□□ -2.27
CCL20P78556 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.87□□□□□ -2.27
CCL20P78556 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC0.87□□□□□ -2.27
CCL20P78556 JTBP1-201ENST00000441314 247 ntBASIC0.87□□□□□ -2.27
CCL20P78556 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.87□□□□□ -2.27
CCL20P78556 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.87□□□□□ -2.27
CCL20P78556 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.87□□□□□ -2.27
CCL20P78556 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC0.87□□□□□ -2.27
CCL20P78556 AC079140.2-201ENST00000506193 142 ntBASIC0.87□□□□□ -2.27
CCL20P78556 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC0.87□□□□□ -2.27
CCL20P78556 AC010486.1-201ENST00000511793 424 ntBASIC0.87□□□□□ -2.27
CCL20P78556 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC0.87□□□□□ -2.27
CCL20P78556 AC112198.4-201ENST00000515450 351 ntBASIC0.87□□□□□ -2.27
CCL20P78556 Y_RNA.687-201ENST00000516558 91 ntBASIC0.87□□□□□ -2.27
CCL20P78556 Y_RNA.689-201ENST00000516589 107 ntBASIC0.87□□□□□ -2.27
CCL20P78556 AC019176.1-201ENST00000518519 225 ntBASIC0.87□□□□□ -2.27
CCL20P78556 AC013828.2-201ENST00000532487 235 ntBASIC0.87□□□□□ -2.27
CCL20P78556 AC090115.3-201ENST00000553218 849 ntBASIC0.87□□□□□ -2.27
CCL20P78556 MIR3146-201ENST00000580367 79 ntBASIC0.87□□□□□ -2.27
CCL20P78556 AC174048.1-201ENST00000603389 144 ntBASIC0.87□□□□□ -2.27
CCL20P78556 AC073413.2-201ENST00000604332 360 ntBASIC0.87□□□□□ -2.27
CCL20P78556 AC103810.9-201ENST00000606688 112 ntBASIC0.87□□□□□ -2.27
CCL20P78556 AL158211.2-201ENST00000607282 395 ntBASIC0.87□□□□□ -2.27
CCL20P78556 PART1_2.1-201ENST00000612397 250 ntBASIC0.87□□□□□ -2.27
CCL20P78556 AL078604.3-201ENST00000615580 211 ntBASIC0.87□□□□□ -2.27
CCL20P78556 AL159153.1-201ENST00000619688 317 ntBASIC0.87□□□□□ -2.27
CCL20P78556 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.87□□□□□ -2.27
CCL20P78556 AC068205.3-201ENST00000636385 468 ntBASIC0.87□□□□□ -2.27
CCL20P78556 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.87□□□□□ -2.27
CCL20P78556 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
CCL20P78556 AC100821.1-201ENST00000523153 2479 ntBASIC0.86□□□□□ -2.27
CCL20P78556 MIR449A-201ENST00000362113 91 ntBASIC0.86□□□□□ -2.27
CCL20P78556 SNORD56.1-201ENST00000362913 68 ntBASIC0.86□□□□□ -2.27
CCL20P78556 RNU6-511P-201ENST00000363496 107 ntBASIC0.86□□□□□ -2.27
CCL20P78556 RNU5E-6P-201ENST00000365574 115 ntBASIC0.86□□□□□ -2.27
CCL20P78556 RNU6-723P-201ENST00000383973 107 ntBASIC0.86□□□□□ -2.27
CCL20P78556 RNU6-296P-201ENST00000384608 107 ntBASIC0.86□□□□□ -2.27
CCL20P78556 MIR618-201ENST00000385287 98 ntBASIC0.86□□□□□ -2.27
CCL20P78556 SNORA26.9-201ENST00000391322 122 ntBASIC0.86□□□□□ -2.27
CCL20P78556 SNORA11.1-201ENST00000408133 129 ntBASIC0.86□□□□□ -2.27
CCL20P78556 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.86□□□□□ -2.27
CCL20P78556 CYCSP49-201ENST00000420810 319 ntBASIC0.86□□□□□ -2.27
CCL20P78556 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.86□□□□□ -2.27
CCL20P78556 MRPL35P3-201ENST00000421557 364 ntBASIC0.86□□□□□ -2.27
CCL20P78556 AC139712.2-201ENST00000424302 339 ntBASIC0.86□□□□□ -2.27
CCL20P78556 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.86□□□□□ -2.27
CCL20P78556 AC027119.1-201ENST00000440877 241 ntBASIC0.86□□□□□ -2.27
CCL20P78556 GDI2P2-201ENST00000445131 608 ntBASIC0.86□□□□□ -2.27
CCL20P78556 NDUFB1P2-201ENST00000449477 176 ntBASIC0.86□□□□□ -2.27
CCL20P78556 RNU6-333P-201ENST00000459117 107 ntBASIC0.86□□□□□ -2.27
CCL20P78556 OR2A41P-201ENST00000473586 105 ntBASIC0.86□□□□□ -2.27
CCL20P78556 RPL30P7-201ENST00000479312 323 ntBASIC0.86□□□□□ -2.27
CCL20P78556 RPL26P26-201ENST00000480251 434 ntBASIC0.86□□□□□ -2.27
CCL20P78556 MTND2P33-201ENST00000506452 1031 ntBASIC0.86□□□□□ -2.27
CCL20P78556 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC0.86□□□□□ -2.27
CCL20P78556 AC112206.3-201ENST00000514578 389 ntBASIC0.86□□□□□ -2.27
CCL20P78556 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.86□□□□□ -2.27
CCL20P78556 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.86□□□□□ -2.27
CCL20P78556 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC0.86□□□□□ -2.27
CCL20P78556 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.86□□□□□ -2.27
CCL20P78556 AL138889.2-201ENST00000603883 242 ntBASIC0.86□□□□□ -2.27
CCL20P78556 AL355802.3-201ENST00000607571 545 ntBASIC0.86□□□□□ -2.27
CCL20P78556 AC006386.1-201ENST00000619436 415 ntBASIC0.86□□□□□ -2.27
CCL20P78556 AL356596.1-201ENST00000624230 379 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms