Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC009812.2-201ENST00000517657 457 ntBASIC2.43□□□□□ -2.02
CX3CL1P78423 SCOCP1-201ENST00000554676 349 ntBASIC2.43□□□□□ -2.02
CX3CL1P78423 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.43□□□□□ -2.02
CX3CL1P78423 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.43□□□□□ -2.02
CX3CL1P78423 AC100830.2-201ENST00000581636 240 ntBASIC2.43□□□□□ -2.02
CX3CL1P78423 MIR3672-201ENST00000584290 82 ntBASIC2.43□□□□□ -2.02
CX3CL1P78423 MIR4765-201ENST00000585007 77 ntBASIC2.43□□□□□ -2.02
CX3CL1P78423 AC011712.1-201ENST00000588959 234 ntBASIC2.43□□□□□ -2.02
CX3CL1P78423 AC012493.2-201ENST00000595083 291 ntBASIC2.43□□□□□ -2.02
CX3CL1P78423 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.43□□□□□ -2.02
CX3CL1P78423 AC009314.1-201ENST00000603871 304 ntBASIC2.43□□□□□ -2.02
CX3CL1P78423 AC019159.1-201ENST00000605094 187 ntBASIC2.43□□□□□ -2.02
CX3CL1P78423 AC005046.1-201ENST00000608515 625 ntBASIC2.43□□□□□ -2.02
CX3CL1P78423 AC096577.2-201ENST00000611455 153 ntBASIC2.43□□□□□ -2.02
CX3CL1P78423 AL138726.1-201ENST00000614873 333 ntBASIC2.43□□□□□ -2.02
CX3CL1P78423 AC090617.7-201ENST00000623952 126 ntBASIC2.43□□□□□ -2.02
CX3CL1P78423 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.43□□□□□ -2.02
CX3CL1P78423 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.43□□□□□ -2.02
CX3CL1P78423 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
CX3CL1P78423 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.42□□□□□ -2.02
CX3CL1P78423 MIR22-201ENST00000362190 85 ntBASIC2.42□□□□□ -2.02
CX3CL1P78423 Y_RNA.135-201ENST00000363439 95 ntBASIC2.42□□□□□ -2.02
CX3CL1P78423 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CX3CL1P78423 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CX3CL1P78423 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CX3CL1P78423 SNORD88.1-201ENST00000408684 91 ntBASIC2.42□□□□□ -2.02
CX3CL1P78423 AC138393.2-201ENST00000414742 246 ntBASIC2.42□□□□□ -2.02
CX3CL1P78423 UBE2V1P4-201ENST00000425374 344 ntBASIC2.42□□□□□ -2.02
CX3CL1P78423 MTCO3P46-201ENST00000425787 232 ntBASIC2.42□□□□□ -2.02
CX3CL1P78423 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.42□□□□□ -2.02
CX3CL1P78423 IFNA20P-201ENST00000436840 528 ntBASIC2.42□□□□□ -2.02
CX3CL1P78423 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CX3CL1P78423 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.42□□□□□ -2.02
CX3CL1P78423 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.42□□□□□ -2.02
CX3CL1P78423 RPL32P28-201ENST00000443577 397 ntBASIC2.42□□□□□ -2.02
CX3CL1P78423 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.42□□□□□ -2.02
CX3CL1P78423 AC112771.1-201ENST00000463581 102 ntBASIC2.42□□□□□ -2.02
CX3CL1P78423 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.42□□□□□ -2.02
CX3CL1P78423 RPL39P5-202ENST00000512505 151 ntBASIC2.42□□□□□ -2.02
CX3CL1P78423 SNORA25.11-201ENST00000515935 105 ntBASIC2.42□□□□□ -2.02
CX3CL1P78423 RN7SKP272-201ENST00000516988 232 ntBASIC2.42□□□□□ -2.02
CX3CL1P78423 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.42□□□□□ -2.02
CX3CL1P78423 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.42□□□□□ -2.02
CX3CL1P78423 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.42□□□□□ -2.02
CX3CL1P78423 AC118273.2-201ENST00000532092 465 ntBASIC2.42□□□□□ -2.02
CX3CL1P78423 AC010186.2-204ENST00000537668 439 ntBASIC2.42□□□□□ -2.02
CX3CL1P78423 AC026371.1-201ENST00000551867 419 ntBASIC2.42□□□□□ -2.02
CX3CL1P78423 MIR4742-201ENST00000581069 85 ntBASIC2.42□□□□□ -2.02
CX3CL1P78423 AC023043.2-201ENST00000589678 1026 ntBASIC2.42□□□□□ -2.02
CX3CL1P78423 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.42□□□□□ -2.02
CX3CL1P78423 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.42□□□□□ -2.02
CX3CL1P78423 MTND5P30-201ENST00000452896 1731 ntBASIC2.42□□□□□ -2.02
CX3CL1P78423 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
CX3CL1P78423 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CX3CL1P78423 CBX3P1-201ENST00000325243 554 ntBASIC2.41□□□□□ -2.02
CX3CL1P78423 Y_RNA.212-201ENST00000364177 102 ntBASIC2.41□□□□□ -2.02
CX3CL1P78423 RNU6-461P-201ENST00000364195 107 ntBASIC2.41□□□□□ -2.02
CX3CL1P78423 Y_RNA.303-201ENST00000364998 94 ntBASIC2.41□□□□□ -2.02
CX3CL1P78423 RNU1-140P-201ENST00000365040 165 ntBASIC2.41□□□□□ -2.02
CX3CL1P78423 SET-203ENST00000372688 801 ntTSL 2 BASIC2.41□□□□□ -2.02
CX3CL1P78423 RNU6-510P-201ENST00000391239 108 ntBASIC2.41□□□□□ -2.02
CX3CL1P78423 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.41□□□□□ -2.02
CX3CL1P78423 RPS15AP10-201ENST00000432472 382 ntBASIC2.41□□□□□ -2.02
CX3CL1P78423 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.41□□□□□ -2.02
CX3CL1P78423 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.41□□□□□ -2.02
CX3CL1P78423 Z96811.1-201ENST00000445880 108 ntBASIC2.41□□□□□ -2.02
CX3CL1P78423 GSTA11P-201ENST00000452866 669 ntBASIC2.41□□□□□ -2.02
CX3CL1P78423 RNU6-329P-201ENST00000459618 107 ntBASIC2.41□□□□□ -2.02
CX3CL1P78423 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.41□□□□□ -2.02
CX3CL1P78423 RPL23AP70-201ENST00000483361 460 ntBASIC2.41□□□□□ -2.02
CX3CL1P78423 RPL36AP48-201ENST00000485521 314 ntBASIC2.41□□□□□ -2.02
CX3CL1P78423 RN7SL20P-201ENST00000488827 297 ntBASIC2.41□□□□□ -2.02
CX3CL1P78423 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.41□□□□□ -2.02
CX3CL1P78423 AC008526.1-201ENST00000509149 338 ntBASIC2.41□□□□□ -2.02
CX3CL1P78423 RNA5SP76-201ENST00000516277 87 ntBASIC2.41□□□□□ -2.02
CX3CL1P78423 RNU6-1088P-201ENST00000516850 104 ntBASIC2.41□□□□□ -2.02
CX3CL1P78423 RNU6-56P-201ENST00000516986 93 ntBASIC2.41□□□□□ -2.02
CX3CL1P78423 CKS1BP7-201ENST00000522230 235 ntBASIC2.41□□□□□ -2.02
CX3CL1P78423 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.41□□□□□ -2.02
CX3CL1P78423 COX6CP5-201ENST00000527162 228 ntBASIC2.41□□□□□ -2.02
CX3CL1P78423 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.41□□□□□ -2.02
CX3CL1P78423 AC079598.5-201ENST00000547460 117 ntBASIC2.41□□□□□ -2.02
CX3CL1P78423 TRAV32-201ENST00000553993 340 ntBASIC2.41□□□□□ -2.02
CX3CL1P78423 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.41□□□□□ -2.02
CX3CL1P78423 MTCO3P13-201ENST00000577757 781 ntBASIC2.41□□□□□ -2.02
CX3CL1P78423 AC090616.3-201ENST00000582184 217 ntBASIC2.41□□□□□ -2.02
CX3CL1P78423 BNIP3P16-201ENST00000589779 534 ntBASIC2.41□□□□□ -2.02
CX3CL1P78423 AL627309.6-201ENST00000606857 840 ntBASIC2.41□□□□□ -2.02
CX3CL1P78423 AC107871.2-201ENST00000612894 502 ntBASIC2.41□□□□□ -2.02
CX3CL1P78423 AC010329.5-201ENST00000623497 2174 ntBASIC2.41□□□□□ -2.02
CX3CL1P78423 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.41□□□□□ -2.02
CX3CL1P78423 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
CX3CL1P78423 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
CX3CL1P78423 AC080128.1-201ENST00000474389 1917 ntBASIC2.4□□□□□ -2.02
CX3CL1P78423 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.4□□□□□ -2.02
CX3CL1P78423 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.4□□□□□ -2.02
CX3CL1P78423 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
CX3CL1P78423 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.02
CX3CL1P78423 RNA5SP374-201ENST00000362939 125 ntBASIC2.4□□□□□ -2.03
CX3CL1P78423 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms