Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 Y_RNA.801-201ENST00000619005 101 ntBASIC3.03□□□□□ -1.92
RAE1P78406 MIR3199-2-201ENST00000636243 86 ntBASIC3.03□□□□□ -1.92
RAE1P78406 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
RAE1P78406 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
RAE1P78406 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
RAE1P78406 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.03□□□□□ -1.93
RAE1P78406 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.02□□□□□ -1.93
RAE1P78406 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.02□□□□□ -1.93
RAE1P78406 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
RAE1P78406 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.02□□□□□ -1.93
RAE1P78406 Y_RNA.2-201ENST00000362330 96 ntBASIC3.02□□□□□ -1.93
RAE1P78406 RNU6-1115P-201ENST00000362490 106 ntBASIC3.02□□□□□ -1.93
RAE1P78406 RNU6-1280P-201ENST00000365211 107 ntBASIC3.02□□□□□ -1.93
RAE1P78406 Y_RNA.445-201ENST00000384168 102 ntBASIC3.02□□□□□ -1.93
RAE1P78406 RNU6-474P-201ENST00000384243 107 ntBASIC3.02□□□□□ -1.93
RAE1P78406 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
RAE1P78406 AL591034.2-201ENST00000402839 359 ntBASIC3.02□□□□□ -1.93
RAE1P78406 FTH1P15-201ENST00000406984 280 ntBASIC3.02□□□□□ -1.93
RAE1P78406 RPL32P35-201ENST00000415214 394 ntBASIC3.02□□□□□ -1.93
RAE1P78406 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.02□□□□□ -1.93
RAE1P78406 AC124916.1-201ENST00000444020 547 ntBASIC3.02□□□□□ -1.93
RAE1P78406 NIPA2P5-201ENST00000452282 464 ntBASIC3.02□□□□□ -1.93
RAE1P78406 AC091153.1-201ENST00000466297 402 ntBASIC3.02□□□□□ -1.93
RAE1P78406 AC133134.1-201ENST00000466800 359 ntBASIC3.02□□□□□ -1.93
RAE1P78406 AC034236.1-201ENST00000469891 373 ntBASIC3.02□□□□□ -1.93
RAE1P78406 MRPL42P6-201ENST00000486397 371 ntBASIC3.02□□□□□ -1.93
RAE1P78406 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.02□□□□□ -1.93
RAE1P78406 AC116655.1-201ENST00000508324 901 ntBASIC3.02□□□□□ -1.93
RAE1P78406 SCARNA16.2-201ENST00000516520 172 ntBASIC3.02□□□□□ -1.93
RAE1P78406 RNA5SP384-201ENST00000516615 116 ntBASIC3.02□□□□□ -1.93
RAE1P78406 SNORA31.18-201ENST00000517043 134 ntBASIC3.02□□□□□ -1.93
RAE1P78406 SNORA31.21-201ENST00000517180 77 ntBASIC3.02□□□□□ -1.93
RAE1P78406 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.02□□□□□ -1.93
RAE1P78406 AP005902.1-201ENST00000521358 186 ntBASIC3.02□□□□□ -1.93
RAE1P78406 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.02□□□□□ -1.93
RAE1P78406 BNIP3P16-201ENST00000589779 534 ntBASIC3.02□□□□□ -1.93
RAE1P78406 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.02□□□□□ -1.93
RAE1P78406 AC022432.1-201ENST00000595739 310 ntBASIC3.02□□□□□ -1.93
RAE1P78406 SNRPGP17-201ENST00000603780 214 ntBASIC3.02□□□□□ -1.93
RAE1P78406 AC092608.2-201ENST00000624427 218 ntBASIC3.02□□□□□ -1.93
RAE1P78406 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
RAE1P78406 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.02□□□□□ -1.93
RAE1P78406 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.02□□□□□ -1.93
RAE1P78406 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
RAE1P78406 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.01□□□□□ -1.93
RAE1P78406 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.01□□□□□ -1.93
RAE1P78406 Y_RNA.112-201ENST00000363250 102 ntBASIC3.01□□□□□ -1.93
RAE1P78406 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.01□□□□□ -1.93
RAE1P78406 SNORD116-20-201ENST00000384529 92 ntBASIC3.01□□□□□ -1.93
RAE1P78406 SNORA41-201ENST00000384675 132 ntBASIC3.01□□□□□ -1.93
RAE1P78406 MIR449B-201ENST00000384995 97 ntBASIC3.01□□□□□ -1.93
RAE1P78406 AL590004.1-201ENST00000405321 300 ntBASIC3.01□□□□□ -1.93
RAE1P78406 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
RAE1P78406 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.01□□□□□ -1.93
RAE1P78406 AL353705.1-201ENST00000433468 480 ntBASIC3.01□□□□□ -1.93
RAE1P78406 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.01□□□□□ -1.93
RAE1P78406 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.01□□□□□ -1.93
RAE1P78406 MIR2053-201ENST00000459295 91 ntBASIC3.01□□□□□ -1.93
RAE1P78406 RPS27P29-201ENST00000463110 252 ntBASIC3.01□□□□□ -1.93
RAE1P78406 RPS29P27-201ENST00000463711 170 ntBASIC3.01□□□□□ -1.93
RAE1P78406 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.01□□□□□ -1.93
RAE1P78406 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.01□□□□□ -1.93
RAE1P78406 RNU6-581P-201ENST00000516214 105 ntBASIC3.01□□□□□ -1.93
RAE1P78406 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.01□□□□□ -1.93
RAE1P78406 Y_RNA.711-201ENST00000516993 102 ntBASIC3.01□□□□□ -1.93
RAE1P78406 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.01□□□□□ -1.93
RAE1P78406 CR383656.8-201ENST00000549046 145 ntBASIC3.01□□□□□ -1.93
RAE1P78406 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.01□□□□□ -1.93
RAE1P78406 MIR5047-201ENST00000579212 100 ntBASIC3.01□□□□□ -1.93
RAE1P78406 MIR3171-201ENST00000584270 74 ntBASIC3.01□□□□□ -1.93
RAE1P78406 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.01□□□□□ -1.93
RAE1P78406 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.01□□□□□ -1.93
RAE1P78406 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.01□□□□□ -1.93
RAE1P78406 AC090617.7-201ENST00000623952 126 ntBASIC3.01□□□□□ -1.93
RAE1P78406 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.01□□□□□ -1.93
RAE1P78406 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
RAE1P78406 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
RAE1P78406 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
RAE1P78406 MTND4P27-201ENST00000450813 1354 ntBASIC3□□□□□ -1.93
RAE1P78406 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3□□□□□ -1.93
RAE1P78406 RNU6-527P-201ENST00000363425 104 ntBASIC3□□□□□ -1.93
RAE1P78406 MIR521-1-201ENST00000384902 87 ntBASIC3□□□□□ -1.93
RAE1P78406 AC023141.4-201ENST00000412031 328 ntBASIC3□□□□□ -1.93
RAE1P78406 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3□□□□□ -1.93
RAE1P78406 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3□□□□□ -1.93
RAE1P78406 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3□□□□□ -1.93
RAE1P78406 AL161651.1-201ENST00000440882 223 ntBASIC3□□□□□ -1.93
RAE1P78406 AL137792.2-201ENST00000443484 235 ntBASIC3□□□□□ -1.93
RAE1P78406 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3□□□□□ -1.93
RAE1P78406 FTH1P2-201ENST00000466086 412 ntBASIC3□□□□□ -1.93
RAE1P78406 RN7SL330P-201ENST00000469709 307 ntBASIC3□□□□□ -1.93
RAE1P78406 MED28P2-201ENST00000475771 317 ntBASIC3□□□□□ -1.93
RAE1P78406 HMGN2P13-201ENST00000476476 274 ntBASIC3□□□□□ -1.93
RAE1P78406 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3□□□□□ -1.93
RAE1P78406 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3□□□□□ -1.93
RAE1P78406 SCARNA15.1-201ENST00000516384 125 ntBASIC3□□□□□ -1.93
RAE1P78406 SNORD19.2-201ENST00000516978 73 ntBASIC3□□□□□ -1.93
RAE1P78406 ELOCP31-201ENST00000540463 467 ntBASIC3□□□□□ -1.93
RAE1P78406 SNRPGP18-201ENST00000553000 214 ntBASIC3□□□□□ -1.93
RAE1P78406 BNIP3P22-201ENST00000593399 556 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms