Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 ZNF736P10Y-201ENST00000403990 1110 ntBASIC0.57□□□□□ -2.32
ABCA4P78363 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.57□□□□□ -2.32
ABCA4P78363 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
ABCA4P78363 RPS26P55-201ENST00000471178 356 ntBASIC0.57□□□□□ -2.32
ABCA4P78363 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.57□□□□□ -2.32
ABCA4P78363 SNORD116-28-201ENST00000516123 91 ntBASIC0.57□□□□□ -2.32
ABCA4P78363 SNORA76.2-201ENST00000517095 137 ntBASIC0.57□□□□□ -2.32
ABCA4P78363 SCARNA1-201ENST00000517138 166 ntBASIC0.57□□□□□ -2.32
ABCA4P78363 AP003034.1-201ENST00000534621 422 ntBASIC0.57□□□□□ -2.32
ABCA4P78363 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.57□□□□□ -2.32
ABCA4P78363 AC090115.3-201ENST00000553218 849 ntBASIC0.57□□□□□ -2.32
ABCA4P78363 AC019288.1-201ENST00000557918 224 ntBASIC0.57□□□□□ -2.32
ABCA4P78363 AP001485.1-201ENST00000604799 199 ntBASIC0.57□□□□□ -2.32
ABCA4P78363 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC0.57□□□□□ -2.32
ABCA4P78363 AC098614.4-201ENST00000607601 462 ntBASIC0.57□□□□□ -2.32
ABCA4P78363 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
ABCA4P78363 RNU6-16P-201ENST00000384385 107 ntBASIC0.56□□□□□ -2.32
ABCA4P78363 RNU6-939P-201ENST00000384634 107 ntBASIC0.56□□□□□ -2.32
ABCA4P78363 MIR506-201ENST00000384998 124 ntBASIC0.56□□□□□ -2.32
ABCA4P78363 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
ABCA4P78363 AC083875.1-201ENST00000419509 405 ntBASIC0.56□□□□□ -2.32
ABCA4P78363 RAC1P8-201ENST00000427086 527 ntBASIC0.56□□□□□ -2.32
ABCA4P78363 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.56□□□□□ -2.32
ABCA4P78363 UBE2V2P3-201ENST00000433562 437 ntBASIC0.56□□□□□ -2.32
ABCA4P78363 TPTE2P1-204ENST00000435256 593 ntBASIC0.56□□□□□ -2.32
ABCA4P78363 AC007000.2-201ENST00000442564 487 ntBASIC0.56□□□□□ -2.32
ABCA4P78363 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.56□□□□□ -2.32
ABCA4P78363 AL035666.1-201ENST00000446195 348 ntBASIC0.56□□□□□ -2.32
ABCA4P78363 MTCYBP43-201ENST00000513621 740 ntBASIC0.56□□□□□ -2.32
ABCA4P78363 RNU6-229P-201ENST00000516614 102 ntBASIC0.56□□□□□ -2.32
ABCA4P78363 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC0.56□□□□□ -2.32
ABCA4P78363 BNIP3P27-201ENST00000599991 412 ntBASIC0.56□□□□□ -2.32
ABCA4P78363 AC069304.2-201ENST00000605154 435 ntBASIC0.56□□□□□ -2.32
ABCA4P78363 AC107952.2-201ENST00000606048 486 ntBASIC0.56□□□□□ -2.32
ABCA4P78363 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
ABCA4P78363 AC087821.2-201ENST00000637086 450 ntBASIC0.56□□□□□ -2.32
ABCA4P78363 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
ABCA4P78363 AC245060.5-201ENST00000610778 3293 ntBASIC0.56□□□□□ -2.32
ABCA4P78363 RNU6-858P-201ENST00000362436 107 ntBASIC0.55□□□□□ -2.32
ABCA4P78363 SNORA22-201ENST00000383907 134 ntBASIC0.55□□□□□ -2.32
ABCA4P78363 SNORA22C-201ENST00000384614 134 ntBASIC0.55□□□□□ -2.32
ABCA4P78363 MIR618-201ENST00000385287 98 ntBASIC0.55□□□□□ -2.32
ABCA4P78363 SNORD65C-201ENST00000390962 71 ntBASIC0.55□□□□□ -2.32
ABCA4P78363 MRPL35P3-201ENST00000421557 364 ntBASIC0.55□□□□□ -2.32
ABCA4P78363 AC069257.2-201ENST00000441819 155 ntBASIC0.55□□□□□ -2.32
ABCA4P78363 MTND5P8-201ENST00000449817 1083 ntBASIC0.55□□□□□ -2.32
ABCA4P78363 AC244505.3-201ENST00000454598 187 ntBASIC0.55□□□□□ -2.32
ABCA4P78363 AC109927.2-201ENST00000506416 303 ntBASIC0.55□□□□□ -2.32
ABCA4P78363 RNU6-965P-201ENST00000516721 96 ntBASIC0.55□□□□□ -2.32
ABCA4P78363 SNORA31.17-201ENST00000516953 127 ntBASIC0.55□□□□□ -2.32
ABCA4P78363 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.55□□□□□ -2.32
ABCA4P78363 TRAV32-201ENST00000553993 340 ntBASIC0.55□□□□□ -2.32
ABCA4P78363 AP001033.2-201ENST00000609701 1003 ntBASIC0.55□□□□□ -2.32
ABCA4P78363 AP003485.1-201ENST00000625093 753 ntBASIC0.55□□□□□ -2.32
ABCA4P78363 RNU6-1167P-201ENST00000363227 94 ntBASIC0.55□□□□□ -2.32
ABCA4P78363 RNU6-546P-201ENST00000383991 107 ntBASIC0.55□□□□□ -2.32
ABCA4P78363 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
ABCA4P78363 RNU6-796P-201ENST00000391086 107 ntBASIC0.55□□□□□ -2.32
ABCA4P78363 AC119751.3-201ENST00000399720 670 ntBASIC0.55□□□□□ -2.32
ABCA4P78363 AL590084.2-201ENST00000401481 382 ntBASIC0.55□□□□□ -2.32
ABCA4P78363 DYNLT3P2-201ENST00000442517 295 ntBASIC0.55□□□□□ -2.32
ABCA4P78363 PGBD4P5-201ENST00000445958 426 ntBASIC0.55□□□□□ -2.32
ABCA4P78363 AC020550.1-201ENST00000447385 163 ntBASIC0.55□□□□□ -2.32
ABCA4P78363 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.55□□□□□ -2.32
ABCA4P78363 AL163195.1-201ENST00000496941 348 ntBASIC0.55□□□□□ -2.32
ABCA4P78363 RNU6-703P-201ENST00000516946 107 ntBASIC0.55□□□□□ -2.32
ABCA4P78363 RNU6-667P-201ENST00000517186 102 ntBASIC0.55□□□□□ -2.32
ABCA4P78363 RN7SKP256-201ENST00000517201 314 ntBASIC0.55□□□□□ -2.32
ABCA4P78363 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.55□□□□□ -2.32
ABCA4P78363 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC0.55□□□□□ -2.32
ABCA4P78363 MIR2909-201ENST00000617113 69 ntBASIC0.55□□□□□ -2.32
ABCA4P78363 AC009269.6-201ENST00000621778 588 ntBASIC0.55□□□□□ -2.32
ABCA4P78363 AL589743.1-201ENST00000551932 2712 ntBASIC0.55□□□□□ -2.32
ABCA4P78363 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.54□□□□□ -2.32
ABCA4P78363 RPL21P24-201ENST00000413752 448 ntBASIC0.54□□□□□ -2.32
ABCA4P78363 AC004854.1-201ENST00000440356 349 ntBASIC0.54□□□□□ -2.32
ABCA4P78363 MTCO3P45-201ENST00000443036 613 ntBASIC0.54□□□□□ -2.32
ABCA4P78363 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.54□□□□□ -2.32
ABCA4P78363 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC0.54□□□□□ -2.32
ABCA4P78363 MTND1P9-201ENST00000453775 944 ntBASIC0.54□□□□□ -2.32
ABCA4P78363 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.54□□□□□ -2.32
ABCA4P78363 AC018868.1-201ENST00000491307 315 ntBASIC0.54□□□□□ -2.32
ABCA4P78363 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC0.54□□□□□ -2.32
ABCA4P78363 RAB11AP2-201ENST00000545905 639 ntBASIC0.54□□□□□ -2.32
ABCA4P78363 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.54□□□□□ -2.32
ABCA4P78363 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.54□□□□□ -2.32
ABCA4P78363 NDUFA8P1-201ENST00000605525 367 ntBASIC0.54□□□□□ -2.32
ABCA4P78363 MIR5087-201ENST00000635826 76 ntBASIC0.54□□□□□ -2.32
ABCA4P78363 RNU6-1280P-201ENST00000365211 107 ntBASIC0.54□□□□□ -2.32
ABCA4P78363 MIR608-201ENST00000384820 100 ntBASIC0.54□□□□□ -2.32
ABCA4P78363 RN7SKP61-201ENST00000410642 295 ntBASIC0.54□□□□□ -2.32
ABCA4P78363 Z95118.1-201ENST00000421372 247 ntBASIC0.54□□□□□ -2.32
ABCA4P78363 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.54□□□□□ -2.32
ABCA4P78363 VN1R42P-201ENST00000424651 344 ntBASIC0.54□□□□□ -2.32
ABCA4P78363 MTCYBP15-201ENST00000433123 1127 ntBASIC0.54□□□□□ -2.32
ABCA4P78363 MTND4P6-201ENST00000438297 472 ntBASIC0.54□□□□□ -2.32
ABCA4P78363 AP006587.4-201ENST00000526053 529 ntBASIC0.54□□□□□ -2.32
ABCA4P78363 OR6C7P-201ENST00000547875 934 ntBASIC0.54□□□□□ -2.32
ABCA4P78363 AL132822.1-201ENST00000617063 513 ntBASIC0.54□□□□□ -2.32
ABCA4P78363 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 139.8 ms