Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 OR8K2P-201ENST00000524645 927 ntBASIC0.91□□□□□ -2.26
HIST1H3AP68431 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.91□□□□□ -2.26
HIST1H3AP68431 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.91□□□□□ -2.26
HIST1H3AP68431 TRAV32-201ENST00000553993 340 ntBASIC0.91□□□□□ -2.26
HIST1H3AP68431 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.91□□□□□ -2.26
HIST1H3AP68431 MIR4769-201ENST00000584126 77 ntBASIC0.91□□□□□ -2.26
HIST1H3AP68431 AC005786.1-201ENST00000588553 154 ntBASIC0.91□□□□□ -2.26
HIST1H3AP68431 AC099785.1-201ENST00000605697 437 ntBASIC0.91□□□□□ -2.26
HIST1H3AP68431 snoU13.31-201ENST00000607291 104 ntBASIC0.91□□□□□ -2.26
HIST1H3AP68431 AC123767.1-202ENST00000620407 817 ntBASIC0.91□□□□□ -2.26
HIST1H3AP68431 AC120349.3-201ENST00000624377 529 ntBASIC0.91□□□□□ -2.26
HIST1H3AP68431 RNU6-53P-201ENST00000365367 106 ntBASIC0.9□□□□□ -2.27
HIST1H3AP68431 RNU6-26P-201ENST00000383985 107 ntBASIC0.9□□□□□ -2.27
HIST1H3AP68431 Y_RNA.578-201ENST00000390903 88 ntBASIC0.9□□□□□ -2.27
HIST1H3AP68431 RNU2-23P-201ENST00000410545 195 ntBASIC0.9□□□□□ -2.27
HIST1H3AP68431 RPL23AP36-201ENST00000413895 458 ntBASIC0.9□□□□□ -2.27
HIST1H3AP68431 SNRPEP10-201ENST00000420249 274 ntBASIC0.9□□□□□ -2.27
HIST1H3AP68431 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC0.9□□□□□ -2.27
HIST1H3AP68431 AC139712.2-201ENST00000424302 339 ntBASIC0.9□□□□□ -2.27
HIST1H3AP68431 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.9□□□□□ -2.27
HIST1H3AP68431 RPL26P26-201ENST00000480251 434 ntBASIC0.9□□□□□ -2.27
HIST1H3AP68431 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.9□□□□□ -2.27
HIST1H3AP68431 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.9□□□□□ -2.27
HIST1H3AP68431 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC0.9□□□□□ -2.27
HIST1H3AP68431 AC092325.1-201ENST00000566449 554 ntBASIC0.9□□□□□ -2.27
HIST1H3AP68431 AC137800.2-201ENST00000574375 120 ntBASIC0.9□□□□□ -2.27
HIST1H3AP68431 MIR5094-201ENST00000578766 85 ntBASIC0.9□□□□□ -2.27
HIST1H3AP68431 MIR4295-201ENST00000585286 85 ntBASIC0.9□□□□□ -2.27
HIST1H3AP68431 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC0.9□□□□□ -2.27
HIST1H3AP68431 AC103810.9-201ENST00000606688 112 ntBASIC0.9□□□□□ -2.27
HIST1H3AP68431 AC063943.3-201ENST00000615562 356 ntBASIC0.9□□□□□ -2.27
HIST1H3AP68431 DDX43P2-201ENST00000604753 1354 ntBASIC0.9□□□□□ -2.27
HIST1H3AP68431 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.9□□□□□ -2.27
HIST1H3AP68431 SNORD114-6-201ENST00000364393 72 ntBASIC0.89□□□□□ -2.27
HIST1H3AP68431 RNU6-622P-201ENST00000384272 103 ntBASIC0.89□□□□□ -2.27
HIST1H3AP68431 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC0.89□□□□□ -2.27
HIST1H3AP68431 AL589872.1-201ENST00000426602 288 ntBASIC0.89□□□□□ -2.27
HIST1H3AP68431 UBE2V1P8-201ENST00000437166 265 ntBASIC0.89□□□□□ -2.27
HIST1H3AP68431 DYNLT3P2-201ENST00000442517 295 ntBASIC0.89□□□□□ -2.27
HIST1H3AP68431 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.89□□□□□ -2.27
HIST1H3AP68431 EEF1E1P1-201ENST00000446998 430 ntBASIC0.89□□□□□ -2.27
HIST1H3AP68431 AC087343.1-201ENST00000477341 475 ntBASIC0.89□□□□□ -2.27
HIST1H3AP68431 RNA5SP458-201ENST00000516188 119 ntBASIC0.89□□□□□ -2.27
HIST1H3AP68431 DEFB108A-201ENST00000530110 222 ntBASIC0.89□□□□□ -2.27
HIST1H3AP68431 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC0.89□□□□□ -2.27
HIST1H3AP68431 AL157871.3-201ENST00000557231 293 ntBASIC0.89□□□□□ -2.27
HIST1H3AP68431 AC006270.3-201ENST00000605967 1036 ntBASIC0.89□□□□□ -2.27
HIST1H3AP68431 AC004492.1-201ENST00000607036 742 ntBASIC0.89□□□□□ -2.27
HIST1H3AP68431 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.89□□□□□ -2.27
HIST1H3AP68431 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.89□□□□□ -2.27
HIST1H3AP68431 AC068205.3-201ENST00000636385 468 ntBASIC0.89□□□□□ -2.27
HIST1H3AP68431 AC099654.8-201ENST00000637757 681 ntBASIC0.89□□□□□ -2.27
HIST1H3AP68431 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.89□□□□□ -2.27
HIST1H3AP68431 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
HIST1H3AP68431 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
HIST1H3AP68431 Y_RNA.33-201ENST00000362591 102 ntBASIC0.88□□□□□ -2.27
HIST1H3AP68431 SNORD33-201ENST00000362761 85 ntBASIC0.88□□□□□ -2.27
HIST1H3AP68431 RNU4-38P-201ENST00000364472 129 ntBASIC0.88□□□□□ -2.27
HIST1H3AP68431 Y_RNA.327-201ENST00000365201 102 ntBASIC0.88□□□□□ -2.27
HIST1H3AP68431 SNORA4.3-201ENST00000365564 137 ntBASIC0.88□□□□□ -2.27
HIST1H3AP68431 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.88□□□□□ -2.27
HIST1H3AP68431 RPL23AP32-201ENST00000395315 459 ntBASIC0.88□□□□□ -2.27
HIST1H3AP68431 MRPL35P1-201ENST00000404272 572 ntBASIC0.88□□□□□ -2.27
HIST1H3AP68431 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.88□□□□□ -2.27
HIST1H3AP68431 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.88□□□□□ -2.27
HIST1H3AP68431 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.88□□□□□ -2.27
HIST1H3AP68431 AL591704.1-201ENST00000432574 275 ntBASIC0.88□□□□□ -2.27
HIST1H3AP68431 AL591212.2-201ENST00000433923 257 ntBASIC0.88□□□□□ -2.27
HIST1H3AP68431 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.88□□□□□ -2.27
HIST1H3AP68431 KATNBL1P3-201ENST00000443475 909 ntBASIC0.88□□□□□ -2.27
HIST1H3AP68431 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
HIST1H3AP68431 AC003071.1-201ENST00000451219 789 ntBASIC0.88□□□□□ -2.27
HIST1H3AP68431 AL583843.1-201ENST00000456070 346 ntBASIC0.88□□□□□ -2.27
HIST1H3AP68431 MTND1P3-201ENST00000484956 952 ntBASIC0.88□□□□□ -2.27
HIST1H3AP68431 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.88□□□□□ -2.27
HIST1H3AP68431 RAB11AP2-201ENST00000545905 639 ntBASIC0.88□□□□□ -2.27
HIST1H3AP68431 CYP3A52P-201ENST00000563326 91 ntBASIC0.88□□□□□ -2.27
HIST1H3AP68431 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.88□□□□□ -2.27
HIST1H3AP68431 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.88□□□□□ -2.27
HIST1H3AP68431 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC0.88□□□□□ -2.27
HIST1H3AP68431 AC112220.3-201ENST00000605502 502 ntBASIC0.88□□□□□ -2.27
HIST1H3AP68431 AP002802.2-201ENST00000605877 235 ntBASIC0.88□□□□□ -2.27
HIST1H3AP68431 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.88□□□□□ -2.27
HIST1H3AP68431 RNU6-942P-201ENST00000363002 107 ntBASIC0.87□□□□□ -2.27
HIST1H3AP68431 RNU6-392P-201ENST00000364926 101 ntBASIC0.87□□□□□ -2.27
HIST1H3AP68431 Y_RNA.534-201ENST00000384599 112 ntBASIC0.87□□□□□ -2.27
HIST1H3AP68431 RNU6-296P-201ENST00000384608 107 ntBASIC0.87□□□□□ -2.27
HIST1H3AP68431 MIR1284-201ENST00000408337 120 ntBASIC0.87□□□□□ -2.27
HIST1H3AP68431 MIR320C1-201ENST00000408566 88 ntBASIC0.87□□□□□ -2.27
HIST1H3AP68431 RPL21P90-201ENST00000415692 466 ntBASIC0.87□□□□□ -2.27
HIST1H3AP68431 CST2P1-201ENST00000425770 87 ntBASIC0.87□□□□□ -2.27
HIST1H3AP68431 CBX3P6-201ENST00000430257 527 ntBASIC0.87□□□□□ -2.27
HIST1H3AP68431 MTND4P15-201ENST00000437913 1033 ntBASIC0.87□□□□□ -2.27
HIST1H3AP68431 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.87□□□□□ -2.27
HIST1H3AP68431 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
HIST1H3AP68431 SNRPFP4-201ENST00000456366 242 ntBASIC0.87□□□□□ -2.27
HIST1H3AP68431 RNA5SP269-201ENST00000459032 137 ntBASIC0.87□□□□□ -2.27
HIST1H3AP68431 snoU109.2-201ENST00000459316 135 ntBASIC0.87□□□□□ -2.27
HIST1H3AP68431 snoU13.14-201ENST00000459372 104 ntBASIC0.87□□□□□ -2.27
HIST1H3AP68431 AL163540.1-201ENST00000485382 386 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms