Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 AC244505.5-201ENST00000443639 207 ntBASIC2.2□□□□□ -2.06
SRP54P61011 RPS27AP8-201ENST00000452665 445 ntBASIC2.2□□□□□ -2.06
SRP54P61011 snoU13.15-201ENST00000459407 104 ntBASIC2.2□□□□□ -2.06
SRP54P61011 snoU13.26-201ENST00000459452 105 ntBASIC2.2□□□□□ -2.06
SRP54P61011 BET1P1-201ENST00000482276 359 ntBASIC2.2□□□□□ -2.06
SRP54P61011 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.2□□□□□ -2.06
SRP54P61011 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.2□□□□□ -2.06
SRP54P61011 AC092436.1-201ENST00000506450 503 ntBASIC2.2□□□□□ -2.06
SRP54P61011 RNU2-53P-201ENST00000516257 147 ntBASIC2.2□□□□□ -2.06
SRP54P61011 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.2□□□□□ -2.06
SRP54P61011 IGKV3-31-201ENST00000523109 329 ntBASIC2.2□□□□□ -2.06
SRP54P61011 AP000873.5-201ENST00000533906 236 ntBASIC2.2□□□□□ -2.06
SRP54P61011 AC007834.2-201ENST00000536310 343 ntBASIC2.2□□□□□ -2.06
SRP54P61011 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.2□□□□□ -2.06
SRP54P61011 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.2□□□□□ -2.06
SRP54P61011 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.2□□□□□ -2.06
SRP54P61011 AC068790.2-201ENST00000602601 557 ntBASIC2.2□□□□□ -2.06
SRP54P61011 RMST_7.1-201ENST00000621935 268 ntBASIC2.2□□□□□ -2.06
SRP54P61011 AL031601.2-202ENST00000622650 282 ntBASIC2.2□□□□□ -2.06
SRP54P61011 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.2□□□□□ -2.06
SRP54P61011 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.2□□□□□ -2.06
SRP54P61011 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SRP54P61011 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SRP54P61011 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SRP54P61011 RNU6-529P-201ENST00000363383 104 ntBASIC2.19□□□□□ -2.06
SRP54P61011 RNU4-48P-201ENST00000365559 182 ntBASIC2.19□□□□□ -2.06
SRP54P61011 SNORD116-8-201ENST00000384365 95 ntBASIC2.19□□□□□ -2.06
SRP54P61011 RNU6-45P-201ENST00000384471 107 ntBASIC2.19□□□□□ -2.06
SRP54P61011 MIR1-2-201ENST00000384961 85 ntBASIC2.19□□□□□ -2.06
SRP54P61011 AL355497.1-201ENST00000406262 551 ntBASIC2.19□□□□□ -2.06
SRP54P61011 SNORD23.1-201ENST00000408212 104 ntBASIC2.19□□□□□ -2.06
SRP54P61011 RNU2-3P-201ENST00000410144 191 ntBASIC2.19□□□□□ -2.06
SRP54P61011 RNU6-1140P-201ENST00000410517 106 ntBASIC2.19□□□□□ -2.06
SRP54P61011 RNU2-23P-201ENST00000410545 195 ntBASIC2.19□□□□□ -2.06
SRP54P61011 RNU4-46P-201ENST00000410818 138 ntBASIC2.19□□□□□ -2.06
SRP54P61011 RN7SKP142-201ENST00000411236 328 ntBASIC2.19□□□□□ -2.06
SRP54P61011 RNA5SP270-201ENST00000411361 118 ntBASIC2.19□□□□□ -2.06
SRP54P61011 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.19□□□□□ -2.06
SRP54P61011 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.19□□□□□ -2.06
SRP54P61011 AC074117.2-201ENST00000417130 397 ntBASIC2.19□□□□□ -2.06
SRP54P61011 BX295541.1-201ENST00000417774 250 ntBASIC2.19□□□□□ -2.06
SRP54P61011 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.19□□□□□ -2.06
SRP54P61011 AL596276.1-201ENST00000434465 418 ntBASIC2.19□□□□□ -2.06
SRP54P61011 HMGB1P31-201ENST00000437242 427 ntBASIC2.19□□□□□ -2.06
SRP54P61011 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.19□□□□□ -2.06
SRP54P61011 KATNBL1P3-201ENST00000443475 909 ntBASIC2.19□□□□□ -2.06
SRP54P61011 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.19□□□□□ -2.06
SRP54P61011 AC079448.1-201ENST00000449377 373 ntBASIC2.19□□□□□ -2.06
SRP54P61011 RPS27P21-201ENST00000486977 252 ntBASIC2.19□□□□□ -2.06
SRP54P61011 MTND3P25-201ENST00000509243 135 ntBASIC2.19□□□□□ -2.06
SRP54P61011 RNA5SP503-201ENST00000517047 117 ntBASIC2.19□□□□□ -2.06
SRP54P61011 BNIP3P6-201ENST00000549284 499 ntBASIC2.19□□□□□ -2.06
SRP54P61011 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.19□□□□□ -2.06
SRP54P61011 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.19□□□□□ -2.06
SRP54P61011 MIR3124-201ENST00000582636 67 ntBASIC2.19□□□□□ -2.06
SRP54P61011 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.19□□□□□ -2.06
SRP54P61011 NDUFA8P1-201ENST00000605525 367 ntBASIC2.19□□□□□ -2.06
SRP54P61011 AC073114.1-201ENST00000612027 490 ntBASIC2.19□□□□□ -2.06
SRP54P61011 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.19□□□□□ -2.06
SRP54P61011 AC008147.4-201ENST00000617570 1204 ntBASIC2.19□□□□□ -2.06
SRP54P61011 AC072046.2-201ENST00000618366 268 ntBASIC2.19□□□□□ -2.06
SRP54P61011 AC078883.4-201ENST00000623218 367 ntBASIC2.19□□□□□ -2.06
SRP54P61011 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SRP54P61011 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SRP54P61011 OR5H15-201ENST00000383696 930 ntBASIC2.18□□□□□ -2.06
SRP54P61011 CETN4P-201ENST00000432407 469 ntBASIC2.18□□□□□ -2.06
SRP54P61011 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.18□□□□□ -2.06
SRP54P61011 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.18□□□□□ -2.06
SRP54P61011 AL162395.1-201ENST00000457882 422 ntBASIC2.18□□□□□ -2.06
SRP54P61011 snoU13.14-201ENST00000459372 104 ntBASIC2.18□□□□□ -2.06
SRP54P61011 MTCO3P9-201ENST00000506989 781 ntBASIC2.18□□□□□ -2.06
SRP54P61011 AC074344.1-201ENST00000512823 224 ntBASIC2.18□□□□□ -2.06
SRP54P61011 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.18□□□□□ -2.06
SRP54P61011 RNU7-193P-201ENST00000516723 65 ntBASIC2.18□□□□□ -2.06
SRP54P61011 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.18□□□□□ -2.06
SRP54P61011 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.18□□□□□ -2.06
SRP54P61011 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.18□□□□□ -2.06
SRP54P61011 OSBPL9P5-201ENST00000542581 171 ntBASIC2.18□□□□□ -2.06
SRP54P61011 IMMP1LP2-201ENST00000552954 492 ntBASIC2.18□□□□□ -2.06
SRP54P61011 AL158211.1-201ENST00000566763 763 ntBASIC2.18□□□□□ -2.06
SRP54P61011 AC093249.1-201ENST00000567049 203 ntBASIC2.18□□□□□ -2.06
SRP54P61011 Z84480.1-201ENST00000605131 311 ntBASIC2.18□□□□□ -2.06
SRP54P61011 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.18□□□□□ -2.06
SRP54P61011 MIR6132-201ENST00000622083 109 ntBASIC2.18□□□□□ -2.06
SRP54P61011 AC009161.2-201ENST00000624626 138 ntBASIC2.18□□□□□ -2.06
SRP54P61011 ZNF720P1-201ENST00000562403 1939 ntBASIC2.17□□□□□ -2.06
SRP54P61011 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
SRP54P61011 MIRLET7G-201ENST00000362280 84 ntBASIC2.17□□□□□ -2.06
SRP54P61011 RNU6-655P-201ENST00000362858 107 ntBASIC2.17□□□□□ -2.06
SRP54P61011 RNU6-78P-201ENST00000362897 107 ntBASIC2.17□□□□□ -2.06
SRP54P61011 RNU6-181P-201ENST00000363225 107 ntBASIC2.17□□□□□ -2.06
SRP54P61011 RNU6-282P-201ENST00000365357 103 ntBASIC2.17□□□□□ -2.06
SRP54P61011 RNA5SP37-201ENST00000365420 130 ntBASIC2.17□□□□□ -2.06
SRP54P61011 RNU6-456P-201ENST00000384493 107 ntBASIC2.17□□□□□ -2.06
SRP54P61011 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SRP54P61011 SNORA11.4-201ENST00000408823 129 ntBASIC2.17□□□□□ -2.06
SRP54P61011 RN7SKP32-201ENST00000410167 303 ntBASIC2.17□□□□□ -2.06
SRP54P61011 RNU4-26P-201ENST00000410270 107 ntBASIC2.17□□□□□ -2.06
SRP54P61011 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.17□□□□□ -2.06
SRP54P61011 CYCSP33-201ENST00000414485 327 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms