Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.3□□□□□ -2.04
RIPK4P57078 MTCO2P19-201ENST00000427513 598 ntBASIC2.3□□□□□ -2.04
RIPK4P57078 RPL23AP30-201ENST00000432419 501 ntBASIC2.3□□□□□ -2.04
RIPK4P57078 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.3□□□□□ -2.04
RIPK4P57078 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.3□□□□□ -2.04
RIPK4P57078 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.3□□□□□ -2.04
RIPK4P57078 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.3□□□□□ -2.04
RIPK4P57078 SCARNA24.1-201ENST00000516465 137 ntBASIC2.3□□□□□ -2.04
RIPK4P57078 Vault.3-201ENST00000516676 95 ntBASIC2.3□□□□□ -2.04
RIPK4P57078 RNA5SP165-201ENST00000517142 115 ntBASIC2.3□□□□□ -2.04
RIPK4P57078 SCARNA11.3-201ENST00000517276 130 ntBASIC2.3□□□□□ -2.04
RIPK4P57078 ARL2BPP2-201ENST00000550907 489 ntBASIC2.3□□□□□ -2.04
RIPK4P57078 AC087883.1-201ENST00000551882 391 ntBASIC2.3□□□□□ -2.04
RIPK4P57078 MIR3682-201ENST00000581338 84 ntBASIC2.3□□□□□ -2.04
RIPK4P57078 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.3□□□□□ -2.04
RIPK4P57078 AL355877.2-201ENST00000603670 358 ntBASIC2.3□□□□□ -2.04
RIPK4P57078 MIR98-201ENST00000606724 119 ntBASIC2.3□□□□□ -2.04
RIPK4P57078 AC092794.1-201ENST00000612734 582 ntBASIC2.3□□□□□ -2.04
RIPK4P57078 SEPT14P19-203ENST00000633205 211 ntBASIC2.3□□□□□ -2.04
RIPK4P57078 MIR6863-201ENST00000636112 90 ntBASIC2.3□□□□□ -2.04
RIPK4P57078 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.3□□□□□ -2.04
RIPK4P57078 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.29□□□□□ -2.04
RIPK4P57078 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.29□□□□□ -2.04
RIPK4P57078 Y_RNA.22-201ENST00000362492 102 ntBASIC2.29□□□□□ -2.04
RIPK4P57078 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
RIPK4P57078 SNORA20.2-201ENST00000383922 131 ntBASIC2.29□□□□□ -2.04
RIPK4P57078 RNU6-817P-201ENST00000391083 104 ntBASIC2.29□□□□□ -2.04
RIPK4P57078 AL627390.1-201ENST00000396055 340 ntBASIC2.29□□□□□ -2.04
RIPK4P57078 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.29□□□□□ -2.04
RIPK4P57078 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.29□□□□□ -2.04
RIPK4P57078 FCF1P9-201ENST00000412546 282 ntBASIC2.29□□□□□ -2.04
RIPK4P57078 AL358453.1-201ENST00000422522 250 ntBASIC2.29□□□□□ -2.04
RIPK4P57078 HMGN2P19-201ENST00000425149 265 ntBASIC2.29□□□□□ -2.04
RIPK4P57078 AC093106.2-201ENST00000428212 385 ntBASIC2.29□□□□□ -2.04
RIPK4P57078 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.29□□□□□ -2.04
RIPK4P57078 GPM6BP2-201ENST00000432046 144 ntBASIC2.29□□□□□ -2.04
RIPK4P57078 GPM6BP1-201ENST00000446387 144 ntBASIC2.29□□□□□ -2.04
RIPK4P57078 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.29□□□□□ -2.04
RIPK4P57078 MTATP6P7-201ENST00000453315 681 ntBASIC2.29□□□□□ -2.04
RIPK4P57078 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.29□□□□□ -2.04
RIPK4P57078 SNORD97-201ENST00000459187 142 ntBASIC2.29□□□□□ -2.04
RIPK4P57078 RNU6-718P-201ENST00000516166 105 ntBASIC2.29□□□□□ -2.04
RIPK4P57078 RNU6-314P-201ENST00000516574 104 ntBASIC2.29□□□□□ -2.04
RIPK4P57078 RNU6-548P-201ENST00000517083 115 ntBASIC2.29□□□□□ -2.04
RIPK4P57078 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.29□□□□□ -2.04
RIPK4P57078 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.29□□□□□ -2.04
RIPK4P57078 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.29□□□□□ -2.04
RIPK4P57078 AC245014.2-201ENST00000603689 287 ntBASIC2.29□□□□□ -2.04
RIPK4P57078 AL670379.6-201ENST00000603753 252 ntBASIC2.29□□□□□ -2.04
RIPK4P57078 AL670379.11-201ENST00000604059 253 ntBASIC2.29□□□□□ -2.04
RIPK4P57078 AC008162.1-201ENST00000604718 254 ntBASIC2.29□□□□□ -2.04
RIPK4P57078 AL670379.1-201ENST00000604752 252 ntBASIC2.29□□□□□ -2.04
RIPK4P57078 AL670379.5-201ENST00000605253 252 ntBASIC2.29□□□□□ -2.04
RIPK4P57078 AL670379.12-201ENST00000605291 253 ntBASIC2.29□□□□□ -2.04
RIPK4P57078 AL670379.8-201ENST00000605353 252 ntBASIC2.29□□□□□ -2.04
RIPK4P57078 AC246785.4-201ENST00000605374 287 ntBASIC2.29□□□□□ -2.04
RIPK4P57078 AL670379.7-201ENST00000605823 252 ntBASIC2.29□□□□□ -2.04
RIPK4P57078 AC090517.2-201ENST00000614966 680 ntBASIC2.29□□□□□ -2.04
RIPK4P57078 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.29□□□□□ -2.04
RIPK4P57078 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
RIPK4P57078 RNU6-461P-201ENST00000364195 107 ntBASIC2.28□□□□□ -2.04
RIPK4P57078 Y_RNA.296-201ENST00000364930 108 ntBASIC2.28□□□□□ -2.04
RIPK4P57078 RNU6-1072P-201ENST00000384703 107 ntBASIC2.28□□□□□ -2.04
RIPK4P57078 RNU6-443P-201ENST00000384780 107 ntBASIC2.28□□□□□ -2.04
RIPK4P57078 MIR1-2-201ENST00000384961 85 ntBASIC2.28□□□□□ -2.04
RIPK4P57078 MTCO3P40-201ENST00000392516 676 ntBASIC2.28□□□□□ -2.04
RIPK4P57078 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
RIPK4P57078 RNU6-648P-201ENST00000410190 107 ntBASIC2.28□□□□□ -2.04
RIPK4P57078 RNU2-36P-201ENST00000410361 191 ntBASIC2.28□□□□□ -2.04
RIPK4P57078 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.28□□□□□ -2.04
RIPK4P57078 AC003685.2-201ENST00000422795 395 ntBASIC2.28□□□□□ -2.04
RIPK4P57078 RAC1P6-201ENST00000423911 575 ntBASIC2.28□□□□□ -2.04
RIPK4P57078 AC133104.1-201ENST00000429100 218 ntBASIC2.28□□□□□ -2.04
RIPK4P57078 AC073464.1-201ENST00000429823 534 ntBASIC2.28□□□□□ -2.04
RIPK4P57078 AL445687.1-201ENST00000439946 251 ntBASIC2.28□□□□□ -2.04
RIPK4P57078 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.28□□□□□ -2.04
RIPK4P57078 MTND1P12-201ENST00000455231 147 ntBASIC2.28□□□□□ -2.04
RIPK4P57078 AL121769.1-201ENST00000469473 401 ntBASIC2.28□□□□□ -2.04
RIPK4P57078 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.28□□□□□ -2.04
RIPK4P57078 AC019235.1-201ENST00000503847 207 ntBASIC2.28□□□□□ -2.04
RIPK4P57078 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.28□□□□□ -2.04
RIPK4P57078 AC098591.2-201ENST00000510152 315 ntBASIC2.28□□□□□ -2.04
RIPK4P57078 AC009646.1-201ENST00000510455 318 ntBASIC2.28□□□□□ -2.04
RIPK4P57078 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.28□□□□□ -2.04
RIPK4P57078 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.28□□□□□ -2.04
RIPK4P57078 SNORA31.23-201ENST00000517219 133 ntBASIC2.28□□□□□ -2.04
RIPK4P57078 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.28□□□□□ -2.04
RIPK4P57078 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.28□□□□□ -2.04
RIPK4P57078 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.28□□□□□ -2.04
RIPK4P57078 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.28□□□□□ -2.04
RIPK4P57078 MIR4524B-201ENST00000581569 115 ntBASIC2.28□□□□□ -2.04
RIPK4P57078 OR1M4P-201ENST00000589199 287 ntBASIC2.28□□□□□ -2.04
RIPK4P57078 AL355598.1-201ENST00000604169 202 ntBASIC2.28□□□□□ -2.04
RIPK4P57078 AP001596.2-201ENST00000608410 312 ntBASIC2.28□□□□□ -2.04
RIPK4P57078 AC068944.2-201ENST00000610373 403 ntBASIC2.28□□□□□ -2.04
RIPK4P57078 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.28□□□□□ -2.04
RIPK4P57078 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
RIPK4P57078 OR4G2P-201ENST00000328113 903 ntBASIC2.27□□□□□ -2.05
RIPK4P57078 RNU6-1090P-201ENST00000364065 94 ntBASIC2.27□□□□□ -2.05
RIPK4P57078 RNU6-188P-201ENST00000364207 107 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms