Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AC093249.1-201ENST00000567049 203 ntBASIC1.88□□□□□ -2.11
PKNOX1P55347 AC137800.2-201ENST00000574375 120 ntBASIC1.88□□□□□ -2.11
PKNOX1P55347 NIFKP6-201ENST00000598115 845 ntBASIC1.88□□□□□ -2.11
PKNOX1P55347 RPL30P11-203ENST00000598995 310 ntBASIC1.88□□□□□ -2.11
PKNOX1P55347 SEPT7P9-203ENST00000604116 343 ntBASIC1.88□□□□□ -2.11
PKNOX1P55347 AC098614.4-201ENST00000607601 462 ntBASIC1.88□□□□□ -2.11
PKNOX1P55347 AC022202.1-201ENST00000613515 211 ntBASIC1.88□□□□□ -2.11
PKNOX1P55347 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.88□□□□□ -2.11
PKNOX1P55347 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
PKNOX1P55347 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.88□□□□□ -2.11
PKNOX1P55347 AP000568.1-201ENST00000282964 442 ntBASIC1.87□□□□□ -2.11
PKNOX1P55347 OR4G2P-201ENST00000328113 903 ntBASIC1.87□□□□□ -2.11
PKNOX1P55347 RNU6-529P-201ENST00000363383 104 ntBASIC1.87□□□□□ -2.11
PKNOX1P55347 RNU6-282P-201ENST00000365357 103 ntBASIC1.87□□□□□ -2.11
PKNOX1P55347 RNU6-108P-201ENST00000365558 107 ntBASIC1.87□□□□□ -2.11
PKNOX1P55347 RNU6-116P-201ENST00000384042 109 ntBASIC1.87□□□□□ -2.11
PKNOX1P55347 SNORA67.3-201ENST00000384366 140 ntBASIC1.87□□□□□ -2.11
PKNOX1P55347 RNU6-550P-201ENST00000391057 101 ntBASIC1.87□□□□□ -2.11
PKNOX1P55347 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.87□□□□□ -2.11
PKNOX1P55347 AL030996.1-201ENST00000411430 235 ntBASIC1.87□□□□□ -2.11
PKNOX1P55347 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.87□□□□□ -2.11
PKNOX1P55347 AC138623.1-201ENST00000418060 216 ntBASIC1.87□□□□□ -2.11
PKNOX1P55347 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.87□□□□□ -2.11
PKNOX1P55347 AC009238.1-201ENST00000442165 424 ntBASIC1.87□□□□□ -2.11
PKNOX1P55347 AC009237.6-201ENST00000446969 424 ntBASIC1.87□□□□□ -2.11
PKNOX1P55347 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.87□□□□□ -2.11
PKNOX1P55347 AL162395.1-201ENST00000457882 422 ntBASIC1.87□□□□□ -2.11
PKNOX1P55347 CKS1BP2-201ENST00000497342 240 ntBASIC1.87□□□□□ -2.11
PKNOX1P55347 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.87□□□□□ -2.11
PKNOX1P55347 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.87□□□□□ -2.11
PKNOX1P55347 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.87□□□□□ -2.11
PKNOX1P55347 RNU2-53P-201ENST00000516257 147 ntBASIC1.87□□□□□ -2.11
PKNOX1P55347 RNA5SP137-201ENST00000516833 135 ntBASIC1.87□□□□□ -2.11
PKNOX1P55347 AC233702.2-202ENST00000562547 291 ntBASIC1.87□□□□□ -2.11
PKNOX1P55347 MIR3126-201ENST00000577443 74 ntBASIC1.87□□□□□ -2.11
PKNOX1P55347 MIR4529-201ENST00000578110 78 ntBASIC1.87□□□□□ -2.11
PKNOX1P55347 AC090897.2-201ENST00000581715 130 ntBASIC1.87□□□□□ -2.11
PKNOX1P55347 AC007229.1-201ENST00000590455 412 ntBASIC1.87□□□□□ -2.11
PKNOX1P55347 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.87□□□□□ -2.11
PKNOX1P55347 RMST_7.1-201ENST00000621935 268 ntBASIC1.87□□□□□ -2.11
PKNOX1P55347 YWHAEP7-203ENST00000622054 312 ntBASIC1.87□□□□□ -2.11
PKNOX1P55347 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.87□□□□□ -2.11
PKNOX1P55347 MIR454-201ENST00000390180 115 ntBASIC1.86□□□□□ -2.11
PKNOX1P55347 MIR676-201ENST00000390702 67 ntBASIC1.86□□□□□ -2.11
PKNOX1P55347 RNU2-20P-201ENST00000410425 191 ntBASIC1.86□□□□□ -2.11
PKNOX1P55347 RNU6-607P-201ENST00000411283 108 ntBASIC1.86□□□□□ -2.11
PKNOX1P55347 CYCSP33-201ENST00000414485 327 ntBASIC1.86□□□□□ -2.11
PKNOX1P55347 EDDM3CP-201ENST00000415977 425 ntBASIC1.86□□□□□ -2.11
PKNOX1P55347 AC074117.2-201ENST00000417130 397 ntBASIC1.86□□□□□ -2.11
PKNOX1P55347 BX295541.1-201ENST00000417774 250 ntBASIC1.86□□□□□ -2.11
PKNOX1P55347 Z98742.3-201ENST00000418637 326 ntBASIC1.86□□□□□ -2.11
PKNOX1P55347 EIF1AXP1-201ENST00000419267 435 ntBASIC1.86□□□□□ -2.11
PKNOX1P55347 DPH3P2-201ENST00000422618 250 ntBASIC1.86□□□□□ -2.11
PKNOX1P55347 HMGN2P19-201ENST00000425149 265 ntBASIC1.86□□□□□ -2.11
PKNOX1P55347 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.86□□□□□ -2.11
PKNOX1P55347 HMGB1P31-201ENST00000437242 427 ntBASIC1.86□□□□□ -2.11
PKNOX1P55347 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.86□□□□□ -2.11
PKNOX1P55347 AC079448.1-201ENST00000449377 373 ntBASIC1.86□□□□□ -2.11
PKNOX1P55347 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.86□□□□□ -2.11
PKNOX1P55347 RNU2-44P-201ENST00000516795 194 ntBASIC1.86□□□□□ -2.11
PKNOX1P55347 AC109329.1-201ENST00000518744 317 ntBASIC1.86□□□□□ -2.11
PKNOX1P55347 AP002453.2-201ENST00000533503 320 ntBASIC1.86□□□□□ -2.11
PKNOX1P55347 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.86□□□□□ -2.11
PKNOX1P55347 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.86□□□□□ -2.11
PKNOX1P55347 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.86□□□□□ -2.11
PKNOX1P55347 MIR5692A1-201ENST00000580523 69 ntBASIC1.86□□□□□ -2.11
PKNOX1P55347 MIR4775-201ENST00000581168 75 ntBASIC1.86□□□□□ -2.11
PKNOX1P55347 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.86□□□□□ -2.11
PKNOX1P55347 AL096840.1-201ENST00000603287 93 ntBASIC1.86□□□□□ -2.11
PKNOX1P55347 uc_338.15-201ENST00000615470 191 ntBASIC1.86□□□□□ -2.11
PKNOX1P55347 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.86□□□□□ -2.11
PKNOX1P55347 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
PKNOX1P55347 SNORA25B-201ENST00000365507 128 ntBASIC1.85□□□□□ -2.11
PKNOX1P55347 RNU2-2P-201ENST00000410396 191 ntBASIC1.85□□□□□ -2.11
PKNOX1P55347 RN7SKP223-201ENST00000410582 62 ntBASIC1.85□□□□□ -2.11
PKNOX1P55347 C1DP2-201ENST00000418167 426 ntBASIC1.85□□□□□ -2.11
PKNOX1P55347 AL139413.1-201ENST00000421309 217 ntBASIC1.85□□□□□ -2.11
PKNOX1P55347 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.85□□□□□ -2.11
PKNOX1P55347 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.85□□□□□ -2.11
PKNOX1P55347 AL353705.4-201ENST00000449661 238 ntBASIC1.85□□□□□ -2.11
PKNOX1P55347 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.85□□□□□ -2.11
PKNOX1P55347 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.85□□□□□ -2.11
PKNOX1P55347 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.85□□□□□ -2.11
PKNOX1P55347 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.85□□□□□ -2.11
PKNOX1P55347 SNORA4.4-201ENST00000515921 135 ntBASIC1.85□□□□□ -2.11
PKNOX1P55347 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.85□□□□□ -2.11
PKNOX1P55347 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.85□□□□□ -2.11
PKNOX1P55347 IMMP1LP2-201ENST00000552954 492 ntBASIC1.85□□□□□ -2.11
PKNOX1P55347 MIR3913-1-201ENST00000577744 102 ntBASIC1.85□□□□□ -2.11
PKNOX1P55347 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.85□□□□□ -2.11
PKNOX1P55347 AC245014.2-201ENST00000603689 287 ntBASIC1.85□□□□□ -2.11
PKNOX1P55347 AC246785.4-201ENST00000605374 287 ntBASIC1.85□□□□□ -2.11
PKNOX1P55347 U2.15-201ENST00000611544 191 ntBASIC1.85□□□□□ -2.11
PKNOX1P55347 U2.16-201ENST00000613119 191 ntBASIC1.85□□□□□ -2.11
PKNOX1P55347 U2.12-201ENST00000613778 191 ntBASIC1.85□□□□□ -2.11
PKNOX1P55347 U2.20-201ENST00000613956 192 ntBASIC1.85□□□□□ -2.11
PKNOX1P55347 U2.9-201ENST00000615427 191 ntBASIC1.85□□□□□ -2.11
PKNOX1P55347 U2.11-201ENST00000616345 191 ntBASIC1.85□□□□□ -2.11
PKNOX1P55347 U2.2-201ENST00000616535 191 ntBASIC1.85□□□□□ -2.11
PKNOX1P55347 U2.3-201ENST00000617785 191 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms