Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 FABP5P14-201ENST00000437273 393 ntBASIC2.32□□□□□ -2.04
VCPP55072 AL161651.1-201ENST00000440882 223 ntBASIC2.32□□□□□ -2.04
VCPP55072 AL078601.1-201ENST00000444542 271 ntBASIC2.32□□□□□ -2.04
VCPP55072 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.32□□□□□ -2.04
VCPP55072 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.32□□□□□ -2.04
VCPP55072 C1DP4-201ENST00000455429 424 ntBASIC2.32□□□□□ -2.04
VCPP55072 AC080013.2-201ENST00000460866 323 ntBASIC2.32□□□□□ -2.04
VCPP55072 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.32□□□□□ -2.04
VCPP55072 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.32□□□□□ -2.04
VCPP55072 RPL38P4-201ENST00000502376 214 ntBASIC2.32□□□□□ -2.04
VCPP55072 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.32□□□□□ -2.04
VCPP55072 MIR892C-201ENST00000516410 77 ntBASIC2.32□□□□□ -2.04
VCPP55072 SNORD19.2-201ENST00000516978 73 ntBASIC2.32□□□□□ -2.04
VCPP55072 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.32□□□□□ -2.04
VCPP55072 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.32□□□□□ -2.04
VCPP55072 AL121821.2-201ENST00000556081 394 ntBASIC2.32□□□□□ -2.04
VCPP55072 LINC00933-203ENST00000559812 219 ntBASIC2.32□□□□□ -2.04
VCPP55072 AL391840.1-201ENST00000571144 367 ntBASIC2.32□□□□□ -2.04
VCPP55072 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.32□□□□□ -2.04
VCPP55072 AC091834.1-201ENST00000614543 472 ntBASIC2.32□□□□□ -2.04
VCPP55072 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
VCPP55072 MIR6134-201ENST00000617606 109 ntBASIC2.32□□□□□ -2.04
VCPP55072 MIR219B-201ENST00000637023 88 ntBASIC2.32□□□□□ -2.04
VCPP55072 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.32□□□□□ -2.04
VCPP55072 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.32□□□□□ -2.04
VCPP55072 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.32□□□□□ -2.04
VCPP55072 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
VCPP55072 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
VCPP55072 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.31□□□□□ -2.04
VCPP55072 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.31□□□□□ -2.04
VCPP55072 MIR337-201ENST00000362281 93 ntBASIC2.31□□□□□ -2.04
VCPP55072 Y_RNA.51-201ENST00000362725 102 ntBASIC2.31□□□□□ -2.04
VCPP55072 SNORD115-7-201ENST00000365306 82 ntBASIC2.31□□□□□ -2.04
VCPP55072 SNORA75B-201ENST00000384053 137 ntBASIC2.31□□□□□ -2.04
VCPP55072 RNU6-166P-201ENST00000384371 107 ntBASIC2.31□□□□□ -2.04
VCPP55072 RNU6-456P-201ENST00000384493 107 ntBASIC2.31□□□□□ -2.04
VCPP55072 Y_RNA.576-201ENST00000384781 102 ntBASIC2.31□□□□□ -2.04
VCPP55072 MIR7-2-201ENST00000384970 110 ntBASIC2.31□□□□□ -2.04
VCPP55072 RNA5SP111-201ENST00000411386 101 ntBASIC2.31□□□□□ -2.04
VCPP55072 AL031779.1-201ENST00000415663 330 ntBASIC2.31□□□□□ -2.04
VCPP55072 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.31□□□□□ -2.04
VCPP55072 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.31□□□□□ -2.04
VCPP55072 MTCO3P5-201ENST00000433620 714 ntBASIC2.31□□□□□ -2.04
VCPP55072 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.31□□□□□ -2.04
VCPP55072 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.31□□□□□ -2.04
VCPP55072 AC068781.1-201ENST00000488231 618 ntBASIC2.31□□□□□ -2.04
VCPP55072 AC022493.1-201ENST00000492984 337 ntBASIC2.31□□□□□ -2.04
VCPP55072 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.31□□□□□ -2.04
VCPP55072 RNU6-581P-201ENST00000516214 105 ntBASIC2.31□□□□□ -2.04
VCPP55072 SNORD27.1-201ENST00000516319 72 ntBASIC2.31□□□□□ -2.04
VCPP55072 RNU6-685P-201ENST00000517088 95 ntBASIC2.31□□□□□ -2.04
VCPP55072 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.31□□□□□ -2.04
VCPP55072 AP002963.1-201ENST00000530590 184 ntBASIC2.31□□□□□ -2.04
VCPP55072 OR5AL2P-201ENST00000532185 920 ntBASIC2.31□□□□□ -2.04
VCPP55072 AC105245.1-201ENST00000581934 244 ntBASIC2.31□□□□□ -2.04
VCPP55072 VN1R80P-201ENST00000597126 338 ntBASIC2.31□□□□□ -2.04
VCPP55072 DEFB131E-202ENST00000602581 683 ntBASIC2.31□□□□□ -2.04
VCPP55072 AC091152.3-201ENST00000604227 325 ntBASIC2.31□□□□□ -2.04
VCPP55072 U6.114-201ENST00000636407 96 ntBASIC2.31□□□□□ -2.04
VCPP55072 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.31□□□□□ -2.04
VCPP55072 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.3□□□□□ -2.04
VCPP55072 Y_RNA.116-201ENST00000363292 103 ntBASIC2.3□□□□□ -2.04
VCPP55072 SNORA62.1-201ENST00000364287 154 ntBASIC2.3□□□□□ -2.04
VCPP55072 MIR518E-201ENST00000385252 88 ntBASIC2.3□□□□□ -2.04
VCPP55072 MIR454-201ENST00000390180 115 ntBASIC2.3□□□□□ -2.04
VCPP55072 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
VCPP55072 DEFB108C-201ENST00000400154 252 ntBASIC2.3□□□□□ -2.04
VCPP55072 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.3□□□□□ -2.04
VCPP55072 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.3□□□□□ -2.04
VCPP55072 MTCYBP5-201ENST00000423752 1135 ntBASIC2.3□□□□□ -2.04
VCPP55072 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.3□□□□□ -2.04
VCPP55072 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.3□□□□□ -2.04
VCPP55072 AC132479.1-201ENST00000449160 144 ntBASIC2.3□□□□□ -2.04
VCPP55072 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.3□□□□□ -2.04
VCPP55072 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.3□□□□□ -2.04
VCPP55072 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.3□□□□□ -2.04
VCPP55072 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.3□□□□□ -2.04
VCPP55072 AC079804.2-201ENST00000490376 200 ntBASIC2.3□□□□□ -2.04
VCPP55072 AC023194.1-201ENST00000493084 308 ntBASIC2.3□□□□□ -2.04
VCPP55072 AC104806.1-201ENST00000508720 308 ntBASIC2.3□□□□□ -2.04
VCPP55072 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.3□□□□□ -2.04
VCPP55072 RN7SKP298-201ENST00000515950 94 ntBASIC2.3□□□□□ -2.04
VCPP55072 RNU7-193P-201ENST00000516723 65 ntBASIC2.3□□□□□ -2.04
VCPP55072 AL133241.1-201ENST00000556832 487 ntBASIC2.3□□□□□ -2.04
VCPP55072 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.3□□□□□ -2.04
VCPP55072 MIR3611-201ENST00000584484 83 ntBASIC2.3□□□□□ -2.04
VCPP55072 MIR548AC-201ENST00000585049 88 ntBASIC2.3□□□□□ -2.04
VCPP55072 AL161423.1-201ENST00000613700 262 ntBASIC2.3□□□□□ -2.04
VCPP55072 AC009831.4-201ENST00000620744 325 ntBASIC2.3□□□□□ -2.04
VCPP55072 AC009161.2-201ENST00000624626 138 ntBASIC2.3□□□□□ -2.04
VCPP55072 CDC27P3-201ENST00000635418 1910 ntBASIC2.3□□□□□ -2.04
VCPP55072 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.29□□□□□ -2.04
VCPP55072 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.29□□□□□ -2.04
VCPP55072 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.29□□□□□ -2.04
VCPP55072 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
VCPP55072 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
VCPP55072 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
VCPP55072 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
VCPP55072 RNU6-898P-201ENST00000365627 104 ntBASIC2.29□□□□□ -2.04
VCPP55072 SNORA51.11-201ENST00000384442 131 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 138.4 ms