Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.32□□□□□ -2.04
HMGCS2P54868 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HMGCS2P54868 MTCO3P30-201ENST00000426425 670 ntBASIC2.32□□□□□ -2.04
HMGCS2P54868 AC000111.3-201ENST00000433478 193 ntBASIC2.32□□□□□ -2.04
HMGCS2P54868 AL606489.2-201ENST00000433886 234 ntBASIC2.32□□□□□ -2.04
HMGCS2P54868 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HMGCS2P54868 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.32□□□□□ -2.04
HMGCS2P54868 RPL37P6-201ENST00000460682 294 ntBASIC2.32□□□□□ -2.04
HMGCS2P54868 AP000852.1-201ENST00000472460 573 ntBASIC2.32□□□□□ -2.04
HMGCS2P54868 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.32□□□□□ -2.04
HMGCS2P54868 AC022493.1-201ENST00000492984 337 ntBASIC2.32□□□□□ -2.04
HMGCS2P54868 RPL23AP63-201ENST00000498752 471 ntBASIC2.32□□□□□ -2.04
HMGCS2P54868 AC009646.1-201ENST00000510455 318 ntBASIC2.32□□□□□ -2.04
HMGCS2P54868 Y_RNA.676-201ENST00000516393 96 ntBASIC2.32□□□□□ -2.04
HMGCS2P54868 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.32□□□□□ -2.04
HMGCS2P54868 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.32□□□□□ -2.04
HMGCS2P54868 TPRKBP2-201ENST00000565969 475 ntBASIC2.32□□□□□ -2.04
HMGCS2P54868 MIR4703-201ENST00000577728 79 ntBASIC2.32□□□□□ -2.04
HMGCS2P54868 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
HMGCS2P54868 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.32□□□□□ -2.04
HMGCS2P54868 DEFB131E-202ENST00000602581 683 ntBASIC2.32□□□□□ -2.04
HMGCS2P54868 AC012507.3-201ENST00000603556 477 ntBASIC2.32□□□□□ -2.04
HMGCS2P54868 SNRPGP19-201ENST00000603826 189 ntBASIC2.32□□□□□ -2.04
HMGCS2P54868 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
HMGCS2P54868 AL449363.1-201ENST00000617815 186 ntBASIC2.32□□□□□ -2.04
HMGCS2P54868 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.32□□□□□ -2.04
HMGCS2P54868 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
HMGCS2P54868 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
HMGCS2P54868 NACAP2-201ENST00000318548 624 ntBASIC2.31□□□□□ -2.04
HMGCS2P54868 Y_RNA.372-201ENST00000365599 102 ntBASIC2.31□□□□□ -2.04
HMGCS2P54868 Y_RNA.554-201ENST00000384672 102 ntBASIC2.31□□□□□ -2.04
HMGCS2P54868 MIR301A-201ENST00000385261 86 ntBASIC2.31□□□□□ -2.04
HMGCS2P54868 RNU6-192P-201ENST00000391253 100 ntBASIC2.31□□□□□ -2.04
HMGCS2P54868 RNU6-903P-201ENST00000391270 109 ntBASIC2.31□□□□□ -2.04
HMGCS2P54868 AF274854.1-201ENST00000413236 615 ntBASIC2.31□□□□□ -2.04
HMGCS2P54868 BPY2DP-201ENST00000422208 265 ntBASIC2.31□□□□□ -2.04
HMGCS2P54868 AL445685.2-201ENST00000422551 342 ntBASIC2.31□□□□□ -2.04
HMGCS2P54868 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.31□□□□□ -2.04
HMGCS2P54868 MTND3P21-201ENST00000433774 331 ntBASIC2.31□□□□□ -2.04
HMGCS2P54868 AL596276.1-201ENST00000434465 418 ntBASIC2.31□□□□□ -2.04
HMGCS2P54868 RPS15AP5-201ENST00000436276 388 ntBASIC2.31□□□□□ -2.04
HMGCS2P54868 BRK1P2-201ENST00000442875 223 ntBASIC2.31□□□□□ -2.04
HMGCS2P54868 AC073415.1-201ENST00000449240 153 ntBASIC2.31□□□□□ -2.04
HMGCS2P54868 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.31□□□□□ -2.04
HMGCS2P54868 AC027673.1-201ENST00000456245 405 ntBASIC2.31□□□□□ -2.04
HMGCS2P54868 GMFBP1-201ENST00000467831 427 ntBASIC2.31□□□□□ -2.04
HMGCS2P54868 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.31□□□□□ -2.04
HMGCS2P54868 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.31□□□□□ -2.04
HMGCS2P54868 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.31□□□□□ -2.04
HMGCS2P54868 AC105417.1-201ENST00000514691 285 ntBASIC2.31□□□□□ -2.04
HMGCS2P54868 SNORA40.12-201ENST00000516329 111 ntBASIC2.31□□□□□ -2.04
HMGCS2P54868 RNU6-143P-201ENST00000516942 93 ntBASIC2.31□□□□□ -2.04
HMGCS2P54868 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.31□□□□□ -2.04
HMGCS2P54868 AC025755.1-201ENST00000521306 278 ntBASIC2.31□□□□□ -2.04
HMGCS2P54868 AC087241.2-201ENST00000535801 324 ntBASIC2.31□□□□□ -2.04
HMGCS2P54868 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.31□□□□□ -2.04
HMGCS2P54868 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.31□□□□□ -2.04
HMGCS2P54868 AL157871.3-201ENST00000557231 293 ntBASIC2.31□□□□□ -2.04
HMGCS2P54868 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.31□□□□□ -2.04
HMGCS2P54868 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.31□□□□□ -2.04
HMGCS2P54868 MIR5002-201ENST00000584713 97 ntBASIC2.31□□□□□ -2.04
HMGCS2P54868 BNIP3P30-201ENST00000601184 574 ntBASIC2.31□□□□□ -2.04
HMGCS2P54868 AC080078.2-201ENST00000603766 501 ntBASIC2.31□□□□□ -2.04
HMGCS2P54868 AL670379.4-201ENST00000605279 254 ntBASIC2.31□□□□□ -2.04
HMGCS2P54868 AC008536.2-201ENST00000607284 349 ntBASIC2.31□□□□□ -2.04
HMGCS2P54868 MIR7515-201ENST00000637837 67 ntBASIC2.31□□□□□ -2.04
HMGCS2P54868 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.31□□□□□ -2.04
HMGCS2P54868 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.3□□□□□ -2.04
HMGCS2P54868 RNU6-116P-201ENST00000384042 109 ntBASIC2.3□□□□□ -2.04
HMGCS2P54868 MIR578-201ENST00000384828 96 ntBASIC2.3□□□□□ -2.04
HMGCS2P54868 SNORA40C-201ENST00000391285 128 ntBASIC2.3□□□□□ -2.04
HMGCS2P54868 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.3□□□□□ -2.04
HMGCS2P54868 Y_RNA.599-201ENST00000410489 109 ntBASIC2.3□□□□□ -2.04
HMGCS2P54868 RNU6-1025P-201ENST00000410629 104 ntBASIC2.3□□□□□ -2.04
HMGCS2P54868 MTCYBP8-201ENST00000422855 651 ntBASIC2.3□□□□□ -2.04
HMGCS2P54868 MTND1P34-201ENST00000438556 671 ntBASIC2.3□□□□□ -2.04
HMGCS2P54868 AC016691.1-201ENST00000441321 413 ntBASIC2.3□□□□□ -2.04
HMGCS2P54868 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.3□□□□□ -2.04
HMGCS2P54868 AL360271.2-201ENST00000447710 161 ntBASIC2.3□□□□□ -2.04
HMGCS2P54868 MTATP6P7-201ENST00000453315 681 ntBASIC2.3□□□□□ -2.04
HMGCS2P54868 SRRM1P2-201ENST00000464531 1192 ntBASIC2.3□□□□□ -2.04
HMGCS2P54868 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.3□□□□□ -2.04
HMGCS2P54868 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.3□□□□□ -2.04
HMGCS2P54868 RNA5SP182-201ENST00000516064 82 ntBASIC2.3□□□□□ -2.04
HMGCS2P54868 Y_RNA.693-201ENST00000516641 110 ntBASIC2.3□□□□□ -2.04
HMGCS2P54868 RNA5SP503-201ENST00000517047 117 ntBASIC2.3□□□□□ -2.04
HMGCS2P54868 SCARNA11.3-201ENST00000517276 130 ntBASIC2.3□□□□□ -2.04
HMGCS2P54868 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.3□□□□□ -2.04
HMGCS2P54868 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.3□□□□□ -2.04
HMGCS2P54868 AL356280.1-201ENST00000603614 379 ntBASIC2.3□□□□□ -2.04
HMGCS2P54868 AC122108.2-201ENST00000611946 526 ntBASIC2.3□□□□□ -2.04
HMGCS2P54868 AL354950.2-201ENST00000617939 290 ntBASIC2.3□□□□□ -2.04
HMGCS2P54868 AC024940.5-201ENST00000622889 474 ntBASIC2.3□□□□□ -2.04
HMGCS2P54868 AC244517.12-201ENST00000623581 663 ntBASIC2.3□□□□□ -2.04
HMGCS2P54868 U6.114-201ENST00000636407 96 ntBASIC2.3□□□□□ -2.04
HMGCS2P54868 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.3□□□□□ -2.04
HMGCS2P54868 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
HMGCS2P54868 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.3□□□□□ -2.04
HMGCS2P54868 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
HMGCS2P54868 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms