Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 ATP1B3P1-201ENST00000605365 821 ntBASIC3.05□□□□□ -1.92
PMS2P54278 AL670379.9-201ENST00000605428 253 ntBASIC3.05□□□□□ -1.92
PMS2P54278 RPL23AP88-201ENST00000605759 454 ntBASIC3.05□□□□□ -1.92
PMS2P54278 AC093732.2-201ENST00000607950 274 ntBASIC3.05□□□□□ -1.92
PMS2P54278 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.05□□□□□ -1.92
PMS2P54278 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.05□□□□□ -1.92
PMS2P54278 U2.21-201ENST00000637295 81 ntBASIC3.05□□□□□ -1.92
PMS2P54278 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.05□□□□□ -1.92
PMS2P54278 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
PMS2P54278 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.04□□□□□ -1.92
PMS2P54278 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PMS2P54278 RNU1-35P-201ENST00000362782 153 ntBASIC3.04□□□□□ -1.92
PMS2P54278 Y_RNA.58-201ENST00000362807 102 ntBASIC3.04□□□□□ -1.92
PMS2P54278 Y_RNA.67-201ENST00000362870 100 ntBASIC3.04□□□□□ -1.92
PMS2P54278 Y_RNA.154-201ENST00000363624 102 ntBASIC3.04□□□□□ -1.92
PMS2P54278 SNORA80A-201ENST00000363922 136 ntBASIC3.04□□□□□ -1.92
PMS2P54278 RNY3P1-201ENST00000365085 102 ntBASIC3.04□□□□□ -1.92
PMS2P54278 RNY3-201ENST00000365484 102 ntBASIC3.04□□□□□ -1.92
PMS2P54278 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.04□□□□□ -1.92
PMS2P54278 Y_RNA.490-201ENST00000384413 102 ntBASIC3.04□□□□□ -1.92
PMS2P54278 RNA5SP354-201ENST00000391247 136 ntBASIC3.04□□□□□ -1.92
PMS2P54278 RN7SKP158-201ENST00000410453 326 ntBASIC3.04□□□□□ -1.92
PMS2P54278 AC074085.1-201ENST00000413598 418 ntBASIC3.04□□□□□ -1.92
PMS2P54278 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.04□□□□□ -1.92
PMS2P54278 MTND1P17-201ENST00000448961 204 ntBASIC3.04□□□□□ -1.92
PMS2P54278 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.04□□□□□ -1.92
PMS2P54278 Y_RNA.632-201ENST00000459189 102 ntBASIC3.04□□□□□ -1.92
PMS2P54278 AC087884.1-201ENST00000469738 328 ntBASIC3.04□□□□□ -1.92
PMS2P54278 AC117503.1-201ENST00000472241 394 ntBASIC3.04□□□□□ -1.92
PMS2P54278 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.04□□□□□ -1.92
PMS2P54278 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.04□□□□□ -1.92
PMS2P54278 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.04□□□□□ -1.92
PMS2P54278 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.04□□□□□ -1.92
PMS2P54278 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.04□□□□□ -1.92
PMS2P54278 AP002404.1-201ENST00000532005 451 ntBASIC3.04□□□□□ -1.92
PMS2P54278 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.04□□□□□ -1.92
PMS2P54278 AC022080.3-201ENST00000544433 482 ntBASIC3.04□□□□□ -1.92
PMS2P54278 MTCO3P13-201ENST00000577757 781 ntBASIC3.04□□□□□ -1.92
PMS2P54278 AC100830.2-201ENST00000581636 240 ntBASIC3.04□□□□□ -1.92
PMS2P54278 HMGN2P15-201ENST00000585707 270 ntBASIC3.04□□□□□ -1.92
PMS2P54278 AC023043.3-201ENST00000593113 385 ntBASIC3.04□□□□□ -1.92
PMS2P54278 MTND4LP5-201ENST00000605152 292 ntBASIC3.04□□□□□ -1.92
PMS2P54278 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
PMS2P54278 RMST_4.1-201ENST00000616886 107 ntBASIC3.04□□□□□ -1.92
PMS2P54278 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.04□□□□□ -1.92
PMS2P54278 AL160413.1-201ENST00000622780 310 ntBASIC3.04□□□□□ -1.92
PMS2P54278 MIR622-201ENST00000638396 96 ntBASIC3.04□□□□□ -1.92
PMS2P54278 AC099654.10-201ENST00000640395 161 ntBASIC3.04□□□□□ -1.92
PMS2P54278 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
PMS2P54278 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
PMS2P54278 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.03□□□□□ -1.92
PMS2P54278 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.03□□□□□ -1.92
PMS2P54278 RNU6-1252P-201ENST00000363054 104 ntBASIC3.03□□□□□ -1.92
PMS2P54278 RNU6-778P-201ENST00000363269 103 ntBASIC3.03□□□□□ -1.92
PMS2P54278 RNU6-395P-201ENST00000365662 106 ntBASIC3.03□□□□□ -1.92
PMS2P54278 MIR181A2-201ENST00000384863 110 ntBASIC3.03□□□□□ -1.92
PMS2P54278 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
PMS2P54278 RPS4XP7-201ENST00000406274 780 ntBASIC3.03□□□□□ -1.92
PMS2P54278 RNU2-3P-201ENST00000410144 191 ntBASIC3.03□□□□□ -1.92
PMS2P54278 CYCSP33-201ENST00000414485 327 ntBASIC3.03□□□□□ -1.92
PMS2P54278 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.03□□□□□ -1.92
PMS2P54278 MYL8P-204ENST00000431574 518 ntBASIC3.03□□□□□ -1.92
PMS2P54278 AC236972.2-201ENST00000434979 310 ntBASIC3.03□□□□□ -1.92
PMS2P54278 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.03□□□□□ -1.92
PMS2P54278 FABP5P14-201ENST00000437273 393 ntBASIC3.03□□□□□ -1.92
PMS2P54278 NDUFB1P2-201ENST00000449477 176 ntBASIC3.03□□□□□ -1.92
PMS2P54278 GSTA11P-201ENST00000452866 669 ntBASIC3.03□□□□□ -1.92
PMS2P54278 MTATP6P7-201ENST00000453315 681 ntBASIC3.03□□□□□ -1.92
PMS2P54278 AC128713.1-201ENST00000471495 306 ntBASIC3.03□□□□□ -1.92
PMS2P54278 MTND5P5-201ENST00000503764 376 ntBASIC3.03□□□□□ -1.92
PMS2P54278 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.03□□□□□ -1.92
PMS2P54278 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.03□□□□□ -1.92
PMS2P54278 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.03□□□□□ -1.92
PMS2P54278 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.03□□□□□ -1.92
PMS2P54278 HSPE1P20-201ENST00000538133 289 ntBASIC3.03□□□□□ -1.92
PMS2P54278 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.03□□□□□ -1.92
PMS2P54278 AC007151.1-201ENST00000572774 483 ntBASIC3.03□□□□□ -1.92
PMS2P54278 UBL5P2-201ENST00000583788 219 ntBASIC3.03□□□□□ -1.92
PMS2P54278 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.03□□□□□ -1.92
PMS2P54278 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.03□□□□□ -1.92
PMS2P54278 AL133255.1-201ENST00000606374 441 ntBASIC3.03□□□□□ -1.92
PMS2P54278 AL031601.2-202ENST00000622650 282 ntBASIC3.03□□□□□ -1.92
PMS2P54278 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
PMS2P54278 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
PMS2P54278 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
PMS2P54278 ZNF519P1-201ENST00000449011 1626 ntBASIC3.02□□□□□ -1.93
PMS2P54278 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.02□□□□□ -1.93
PMS2P54278 Y_RNA.33-201ENST00000362591 102 ntBASIC3.02□□□□□ -1.93
PMS2P54278 SNORA44-201ENST00000384584 132 ntBASIC3.02□□□□□ -1.93
PMS2P54278 MIR767-201ENST00000390228 109 ntBASIC3.02□□□□□ -1.93
PMS2P54278 AF228730.4-201ENST00000421457 183 ntBASIC3.02□□□□□ -1.93
PMS2P54278 SKA2P1-201ENST00000425592 390 ntBASIC3.02□□□□□ -1.93
PMS2P54278 SNAP23P1-201ENST00000433229 246 ntBASIC3.02□□□□□ -1.93
PMS2P54278 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.02□□□□□ -1.93
PMS2P54278 AC107399.1-201ENST00000451226 265 ntBASIC3.02□□□□□ -1.93
PMS2P54278 SNORD19B-201ENST00000459623 84 ntBASIC3.02□□□□□ -1.93
PMS2P54278 AC008526.1-201ENST00000509149 338 ntBASIC3.02□□□□□ -1.93
PMS2P54278 MTND3P25-201ENST00000509243 135 ntBASIC3.02□□□□□ -1.93
PMS2P54278 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.02□□□□□ -1.93
PMS2P54278 AC087854.1-201ENST00000519706 414 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 171 ms