Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CLCN3P51790 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.91□□□□□ -1.94
CLCN3P51790 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.91□□□□□ -1.94
CLCN3P51790 RNU4-73P-201ENST00000363164 141 ntBASIC2.91□□□□□ -1.94
CLCN3P51790 RNA5SP68-201ENST00000363885 119 ntBASIC2.91□□□□□ -1.94
CLCN3P51790 SNORD14B-201ENST00000364533 90 ntBASIC2.91□□□□□ -1.94
CLCN3P51790 Z98749.2-208ENST00000381646 500 ntBASIC2.91□□□□□ -1.94
CLCN3P51790 Y_RNA.480-201ENST00000384364 102 ntBASIC2.91□□□□□ -1.94
CLCN3P51790 Y_RNA.530-201ENST00000384587 101 ntBASIC2.91□□□□□ -1.94
CLCN3P51790 SNORA16.2-201ENST00000390991 127 ntBASIC2.91□□□□□ -1.94
CLCN3P51790 RNU6-510P-201ENST00000391239 108 ntBASIC2.91□□□□□ -1.94
CLCN3P51790 AL356057.2-201ENST00000403318 432 ntBASIC2.91□□□□□ -1.94
CLCN3P51790 RNU4-26P-201ENST00000410270 107 ntBASIC2.91□□□□□ -1.94
CLCN3P51790 AC023141.4-201ENST00000412031 328 ntBASIC2.91□□□□□ -1.94
CLCN3P51790 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.91□□□□□ -1.94
CLCN3P51790 USP9YP20-201ENST00000419224 558 ntBASIC2.91□□□□□ -1.94
CLCN3P51790 PRPS1P1-201ENST00000445305 876 ntBASIC2.91□□□□□ -1.94
CLCN3P51790 MRPL50P4-201ENST00000446432 475 ntBASIC2.91□□□□□ -1.94
CLCN3P51790 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.91□□□□□ -1.94
CLCN3P51790 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.91□□□□□ -1.94
CLCN3P51790 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.91□□□□□ -1.94
CLCN3P51790 AL583843.1-201ENST00000456070 346 ntBASIC2.91□□□□□ -1.94
CLCN3P51790 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.91□□□□□ -1.94
CLCN3P51790 AC091179.1-201ENST00000461606 579 ntBASIC2.91□□□□□ -1.94
CLCN3P51790 AC011005.2-201ENST00000487324 359 ntBASIC2.91□□□□□ -1.94
CLCN3P51790 SRIP1-201ENST00000489235 288 ntBASIC2.91□□□□□ -1.94
CLCN3P51790 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.91□□□□□ -1.94
CLCN3P51790 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.91□□□□□ -1.94
CLCN3P51790 RNU2-69P-201ENST00000516061 100 ntBASIC2.91□□□□□ -1.94
CLCN3P51790 RNU4-49P-201ENST00000516080 140 ntBASIC2.91□□□□□ -1.94
CLCN3P51790 RNU7-30P-201ENST00000516835 62 ntBASIC2.91□□□□□ -1.94
CLCN3P51790 BTF3P12-201ENST00000519620 469 ntBASIC2.91□□□□□ -1.94
CLCN3P51790 GLYCAM1-201ENST00000546596 285 ntBASIC2.91□□□□□ -1.94
CLCN3P51790 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.91□□□□□ -1.94
CLCN3P51790 AC090115.3-201ENST00000553218 849 ntBASIC2.91□□□□□ -1.94
CLCN3P51790 AC021739.1-201ENST00000559631 174 ntBASIC2.91□□□□□ -1.94
CLCN3P51790 AC073539.2-201ENST00000597113 165 ntBASIC2.91□□□□□ -1.94
CLCN3P51790 AL133393.1-201ENST00000603277 287 ntBASIC2.91□□□□□ -1.94
CLCN3P51790 CTHRC1P1-201ENST00000605383 469 ntBASIC2.91□□□□□ -1.94
CLCN3P51790 AC004832.5-201ENST00000608677 401 ntBASIC2.91□□□□□ -1.94
CLCN3P51790 AC103705.1-201ENST00000619013 241 ntBASIC2.91□□□□□ -1.94
CLCN3P51790 AP003400.5-201ENST00000624827 617 ntBASIC2.91□□□□□ -1.94
CLCN3P51790 AC110079.1-202ENST00000635213 138 ntBASIC2.91□□□□□ -1.94
CLCN3P51790 MIR3199-2-201ENST00000636243 86 ntBASIC2.91□□□□□ -1.94
CLCN3P51790 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CLCN3P51790 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.91□□□□□ -1.94
CLCN3P51790 CDC27P3-201ENST00000635418 1910 ntBASIC2.91□□□□□ -1.94
CLCN3P51790 AL161431.1-201ENST00000618966 4205 ntBASIC2.91□□□□□ -1.94
CLCN3P51790 AC092435.3-201ENST00000565538 3654 ntBASIC2.9□□□□□ -1.94
CLCN3P51790 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.9□□□□□ -1.94
CLCN3P51790 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
CLCN3P51790 SNORD62.1-201ENST00000362541 86 ntBASIC2.9□□□□□ -1.95
CLCN3P51790 Y_RNA.184-201ENST00000363884 108 ntBASIC2.9□□□□□ -1.95
CLCN3P51790 Y_RNA.301-201ENST00000364990 103 ntBASIC2.9□□□□□ -1.95
CLCN3P51790 XGY1-201ENST00000381172 446 ntBASIC2.9□□□□□ -1.95
CLCN3P51790 MIR767-201ENST00000390228 109 ntBASIC2.9□□□□□ -1.95
CLCN3P51790 RNU6-750P-201ENST00000390946 107 ntBASIC2.9□□□□□ -1.95
CLCN3P51790 SNORD70.1-201ENST00000391007 85 ntBASIC2.9□□□□□ -1.95
CLCN3P51790 SAR1AP2-201ENST00000392696 594 ntBASIC2.9□□□□□ -1.95
CLCN3P51790 AC009161.1-201ENST00000417306 376 ntBASIC2.9□□□□□ -1.95
CLCN3P51790 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.9□□□□□ -1.95
CLCN3P51790 AC093151.1-201ENST00000427711 313 ntBASIC2.9□□□□□ -1.95
CLCN3P51790 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.9□□□□□ -1.95
CLCN3P51790 AC093019.1-201ENST00000443135 252 ntBASIC2.9□□□□□ -1.95
CLCN3P51790 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.9□□□□□ -1.95
CLCN3P51790 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.9□□□□□ -1.95
CLCN3P51790 RPS27P26-201ENST00000494583 239 ntBASIC2.9□□□□□ -1.95
CLCN3P51790 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.9□□□□□ -1.95
CLCN3P51790 MIR892C-201ENST00000516410 77 ntBASIC2.9□□□□□ -1.95
CLCN3P51790 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.9□□□□□ -1.95
CLCN3P51790 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.9□□□□□ -1.95
CLCN3P51790 AC010653.1-201ENST00000571108 881 ntBASIC2.9□□□□□ -1.95
CLCN3P51790 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CLCN3P51790 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.9□□□□□ -1.95
CLCN3P51790 AC005498.1-201ENST00000592125 465 ntBASIC2.9□□□□□ -1.95
CLCN3P51790 MAPK10-266ENST00000641066 6555 ntBASIC2.9□□□□□ -1.95
CLCN3P51790 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.9□□□□□ -1.95
CLCN3P51790 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CLCN3P51790 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.89□□□□□ -1.95
CLCN3P51790 Y_RNA.414-201ENST00000384011 101 ntBASIC2.89□□□□□ -1.95
CLCN3P51790 MIR518D-201ENST00000385014 87 ntBASIC2.89□□□□□ -1.95
CLCN3P51790 MIR181B1-201ENST00000385240 110 ntBASIC2.89□□□□□ -1.95
CLCN3P51790 SNORD37.1-201ENST00000390968 65 ntBASIC2.89□□□□□ -1.95
CLCN3P51790 RNA5SP354-201ENST00000391247 136 ntBASIC2.89□□□□□ -1.95
CLCN3P51790 RNA5SP344-201ENST00000411081 104 ntBASIC2.89□□□□□ -1.95
CLCN3P51790 BTF3P15-201ENST00000455606 336 ntBASIC2.89□□□□□ -1.95
CLCN3P51790 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.89□□□□□ -1.95
CLCN3P51790 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.89□□□□□ -1.95
CLCN3P51790 AC103851.1-201ENST00000506833 274 ntBASIC2.89□□□□□ -1.95
CLCN3P51790 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.89□□□□□ -1.95
CLCN3P51790 RNU6-864P-201ENST00000516256 108 ntBASIC2.89□□□□□ -1.95
CLCN3P51790 RNA5SP282-201ENST00000516355 108 ntBASIC2.89□□□□□ -1.95
CLCN3P51790 RNU6-1038P-201ENST00000516516 104 ntBASIC2.89□□□□□ -1.95
CLCN3P51790 RN7SKP256-201ENST00000517201 314 ntBASIC2.89□□□□□ -1.95
CLCN3P51790 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.89□□□□□ -1.95
CLCN3P51790 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.89□□□□□ -1.95
CLCN3P51790 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.89□□□□□ -1.95
CLCN3P51790 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.89□□□□□ -1.95
CLCN3P51790 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.89□□□□□ -1.95
CLCN3P51790 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms