Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AL157786.1-207ENST00000627771 695 ntBASIC1.72□□□□□ -2.13
CX3CR1P49238 MIR219B-201ENST00000637023 88 ntBASIC1.72□□□□□ -2.13
CX3CR1P49238 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.72□□□□□ -2.13
CX3CR1P49238 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.72□□□□□ -2.13
CX3CR1P49238 FGF7P2-201ENST00000332473 296 ntBASIC1.71□□□□□ -2.14
CX3CR1P49238 SNORD115-3-201ENST00000363100 82 ntBASIC1.71□□□□□ -2.14
CX3CR1P49238 RNU6-282P-201ENST00000365357 103 ntBASIC1.71□□□□□ -2.14
CX3CR1P49238 SNORA40.19-201ENST00000390846 128 ntBASIC1.71□□□□□ -2.14
CX3CR1P49238 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.71□□□□□ -2.14
CX3CR1P49238 SNORA3.2-201ENST00000408221 125 ntBASIC1.71□□□□□ -2.14
CX3CR1P49238 RN7SKP223-201ENST00000410582 62 ntBASIC1.71□□□□□ -2.14
CX3CR1P49238 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.71□□□□□ -2.14
CX3CR1P49238 DPH3P2-201ENST00000422618 250 ntBASIC1.71□□□□□ -2.14
CX3CR1P49238 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.71□□□□□ -2.14
CX3CR1P49238 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.71□□□□□ -2.14
CX3CR1P49238 RPL31P35-201ENST00000431058 377 ntBASIC1.71□□□□□ -2.14
CX3CR1P49238 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.71□□□□□ -2.14
CX3CR1P49238 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.71□□□□□ -2.14
CX3CR1P49238 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.71□□□□□ -2.14
CX3CR1P49238 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.71□□□□□ -2.14
CX3CR1P49238 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.71□□□□□ -2.14
CX3CR1P49238 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
CX3CR1P49238 SNORD42A-201ENST00000459584 64 ntBASIC1.71□□□□□ -2.14
CX3CR1P49238 BET1P1-201ENST00000482276 359 ntBASIC1.71□□□□□ -2.14
CX3CR1P49238 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.71□□□□□ -2.14
CX3CR1P49238 AC091965.2-201ENST00000512324 613 ntBASIC1.71□□□□□ -2.14
CX3CR1P49238 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.71□□□□□ -2.14
CX3CR1P49238 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.71□□□□□ -2.14
CX3CR1P49238 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.71□□□□□ -2.14
CX3CR1P49238 MIR3913-1-201ENST00000577744 102 ntBASIC1.71□□□□□ -2.14
CX3CR1P49238 NIFKP6-201ENST00000598115 845 ntBASIC1.71□□□□□ -2.14
CX3CR1P49238 AL138889.2-201ENST00000603883 242 ntBASIC1.71□□□□□ -2.14
CX3CR1P49238 AC005034.5-201ENST00000604219 466 ntBASIC1.71□□□□□ -2.14
CX3CR1P49238 AC064872.1-201ENST00000604823 1072 ntBASIC1.71□□□□□ -2.14
CX3CR1P49238 AL773524.1-201ENST00000614065 229 ntBASIC1.71□□□□□ -2.14
CX3CR1P49238 AC110994.2-201ENST00000635481 492 ntBASIC1.71□□□□□ -2.14
CX3CR1P49238 HAUS6P2-201ENST00000433254 2404 ntBASIC1.71□□□□□ -2.14
CX3CR1P49238 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
CX3CR1P49238 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.71□□□□□ -2.14
CX3CR1P49238 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
CX3CR1P49238 RNU6-371P-201ENST00000364283 108 ntBASIC1.7□□□□□ -2.14
CX3CR1P49238 SNORD14B-201ENST00000364533 90 ntBASIC1.7□□□□□ -2.14
CX3CR1P49238 Y_RNA.367-201ENST00000365544 101 ntBASIC1.7□□□□□ -2.14
CX3CR1P49238 RNU6-641P-201ENST00000384006 107 ntBASIC1.7□□□□□ -2.14
CX3CR1P49238 RNU6-74P-201ENST00000384235 107 ntBASIC1.7□□□□□ -2.14
CX3CR1P49238 RNU6-622P-201ENST00000384272 103 ntBASIC1.7□□□□□ -2.14
CX3CR1P49238 SNORD116-20-201ENST00000384529 92 ntBASIC1.7□□□□□ -2.14
CX3CR1P49238 RNY3P10-201ENST00000384764 102 ntBASIC1.7□□□□□ -2.14
CX3CR1P49238 Y_RNA.576-201ENST00000384781 102 ntBASIC1.7□□□□□ -2.14
CX3CR1P49238 MIR1-2-201ENST00000384961 85 ntBASIC1.7□□□□□ -2.14
CX3CR1P49238 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.7□□□□□ -2.14
CX3CR1P49238 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.7□□□□□ -2.14
CX3CR1P49238 AL049545.1-201ENST00000401856 572 ntBASIC1.7□□□□□ -2.14
CX3CR1P49238 RNA5SP489-201ENST00000410986 109 ntBASIC1.7□□□□□ -2.14
CX3CR1P49238 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.7□□□□□ -2.14
CX3CR1P49238 AL158823.1-201ENST00000418441 478 ntBASIC1.7□□□□□ -2.14
CX3CR1P49238 EIF1AXP1-201ENST00000419267 435 ntBASIC1.7□□□□□ -2.14
CX3CR1P49238 AC137499.1-201ENST00000427602 88 ntBASIC1.7□□□□□ -2.14
CX3CR1P49238 AL445646.1-201ENST00000431784 216 ntBASIC1.7□□□□□ -2.14
CX3CR1P49238 AL139415.2-201ENST00000431968 163 ntBASIC1.7□□□□□ -2.14
CX3CR1P49238 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.7□□□□□ -2.14
CX3CR1P49238 AC073614.1-201ENST00000438690 650 ntBASIC1.7□□□□□ -2.14
CX3CR1P49238 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.7□□□□□ -2.14
CX3CR1P49238 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.7□□□□□ -2.14
CX3CR1P49238 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.7□□□□□ -2.14
CX3CR1P49238 MTND2P4-201ENST00000445034 1004 ntBASIC1.7□□□□□ -2.14
CX3CR1P49238 RPL23AP6-201ENST00000446637 472 ntBASIC1.7□□□□□ -2.14
CX3CR1P49238 AC079448.1-201ENST00000449377 373 ntBASIC1.7□□□□□ -2.14
CX3CR1P49238 NDUFB1P2-201ENST00000449477 176 ntBASIC1.7□□□□□ -2.14
CX3CR1P49238 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.7□□□□□ -2.14
CX3CR1P49238 UBE2DNL-203ENST00000474922 222 ntBASIC1.7□□□□□ -2.14
CX3CR1P49238 AP001025.1-201ENST00000486139 332 ntBASIC1.7□□□□□ -2.14
CX3CR1P49238 AC008549.1-201ENST00000512900 643 ntBASIC1.7□□□□□ -2.14
CX3CR1P49238 MTCO3P28-201ENST00000513351 515 ntBASIC1.7□□□□□ -2.14
CX3CR1P49238 RNU1-86P-201ENST00000516108 154 ntBASIC1.7□□□□□ -2.14
CX3CR1P49238 RNU1-107P-201ENST00000516617 154 ntBASIC1.7□□□□□ -2.14
CX3CR1P49238 Vault.3-201ENST00000516676 95 ntBASIC1.7□□□□□ -2.14
CX3CR1P49238 SNORA31.23-201ENST00000517219 133 ntBASIC1.7□□□□□ -2.14
CX3CR1P49238 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.7□□□□□ -2.14
CX3CR1P49238 AC007834.2-201ENST00000536310 343 ntBASIC1.7□□□□□ -2.14
CX3CR1P49238 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.7□□□□□ -2.14
CX3CR1P49238 MIR548AC-201ENST00000585049 88 ntBASIC1.7□□□□□ -2.14
CX3CR1P49238 SNRPGP19-201ENST00000603826 189 ntBASIC1.7□□□□□ -2.14
CX3CR1P49238 AC022079.1-201ENST00000621546 602 ntBASIC1.7□□□□□ -2.14
CX3CR1P49238 AC091932.3-201ENST00000624223 323 ntBASIC1.7□□□□□ -2.14
CX3CR1P49238 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.7□□□□□ -2.14
CX3CR1P49238 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
CX3CR1P49238 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.69□□□□□ -2.14
CX3CR1P49238 RNU6-487P-201ENST00000365430 104 ntBASIC1.69□□□□□ -2.14
CX3CR1P49238 RNU6-1274P-201ENST00000384557 107 ntBASIC1.69□□□□□ -2.14
CX3CR1P49238 RNU6-1179P-201ENST00000384667 107 ntBASIC1.69□□□□□ -2.14
CX3CR1P49238 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
CX3CR1P49238 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.69□□□□□ -2.14
CX3CR1P49238 RNU2-48P-201ENST00000410694 191 ntBASIC1.69□□□□□ -2.14
CX3CR1P49238 RNU2-32P-201ENST00000411193 191 ntBASIC1.69□□□□□ -2.14
CX3CR1P49238 BX295541.1-201ENST00000417774 250 ntBASIC1.69□□□□□ -2.14
CX3CR1P49238 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.69□□□□□ -2.14
CX3CR1P49238 MTCO2P34-201ENST00000421994 607 ntBASIC1.69□□□□□ -2.14
CX3CR1P49238 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.69□□□□□ -2.14
CX3CR1P49238 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms